Gene: Thhalv10028368m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10028368m.g
  • Transcript Identifier Thhalv10028368m
  • Gene Type Coding gene
  • Location scaffold_3 : 465872-470561 : positive

Gene Family Information

  • ID HOM05D000257
  • #Genes/#Species 1674/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10028368m.g.v1.0
  • pacid 20197194

Descriptions

  • Description PF01535//PF11955//PF13041//PF14432 - PPR repeat (PPR) // Plant organelle RNA recognition domain (PORR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003723
IEA
InterProRNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR032867 DYW domain
IPR021099 Plant organelle RNA recognition domain
Mapman id Description
16.11.4.1.1.4 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.basal splicing factor (WTF1)