Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 0.0e+00 1346.6 698 100.0
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 0.0e+00 1130.9 696 85.5
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 8.4e-259 897.1 708 66.9
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 2.1e-249 865.9 706 65.3
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 6.5e-243 844.3 703 64.7
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 2.5e-242 842.4 707 64.6
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.0e-240 837.0 712 64.7
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 9.7e-239 830.5 712 63.6
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 2.2e-238 829.3 711 64.0
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.2e-236 823.5 711 63.9
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 3.5e-236 822.0 709 64.0
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 6.1e-233 811.2 711 64.1
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 1.4e-232 810.1 713 63.4
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 6.7e-232 807.7 707 63.6
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 5.7e-231 804.7 706 63.3
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 1.3e-230 803.5 713 62.1
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 6.3e-230 801.2 710 63.2
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 1.1e-229 800.4 708 62.4
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 3.8e-227 792.0 715 60.8
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 3.2e-226 788.9 711 61.7
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 9.4e-226 787.3 711 62.2
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 1.6e-225 786.6 719 62.7
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 8.0e-225 784.3 693 64.1
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 2.3e-224 782.7 732 59.7
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 5.2e-224 781.6 713 62.1
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.7e-222 776.5 737 59.3
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 3.5e-220 768.8 720 59.4
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 5.9e-220 768.1 710 59.9
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 1.3e-219 766.9 728 59.5
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 1.3e-219 766.9 864 52.5
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 3.2e-218 762.3 712 60.1
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 4.2e-218 761.9 712 59.7
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 9.4e-218 760.8 699 61.1
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 9.4e-218 760.8 708 60.7
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-217 760.4 712 60.5
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.4e-216 756.9 713 60.4
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 3.0e-216 755.7 713 60.9
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 6.8e-216 754.6 706 59.8
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 2.6e-215 752.7 697 61.1
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 3.4e-215 752.3 708 60.5
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 5.7e-215 751.5 712 60.1
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 6.3e-214 748.0 714 59.8
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.4e-213 746.9 713 59.6
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 3.1e-213 745.7 710 59.6
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 4.1e-213 745.3 713 59.3
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 5.4e-213 745.0 710 59.2
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 2.7e-212 742.7 704 59.8
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 4.5e-212 741.9 699 60.2
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 4.5e-212 741.9 718 58.6
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 1.3e-211 740.3 713 60.0
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.7e-211 740.0 704 59.1
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.9e-210 736.5 710 58.9
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 2.5e-210 736.1 720 58.1
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 4.2e-210 735.3 709 59.0
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 2.1e-209 733.0 730 57.7
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 2.3e-208 729.6 706 58.4
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 6.8e-208 728.0 737 57.9
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 1.2e-207 727.2 711 57.7
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 2.0e-207 726.5 710 58.3
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 4.9e-206 721.8 697 57.8
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 1.8e-205 719.9 712 57.6
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 2.4e-205 719.5 713 58.5
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 1.2e-204 717.2 721 57.4
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 7.8e-204 714.5 706 58.2
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 6.6e-203 711.4 713 57.9
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 6.6e-203 711.4 716 58.4
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 1.9e-202 709.9 714 57.6
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 1.9e-202 709.9 721 56.9
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 1.9e-202 709.9 716 58.4
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 4.3e-202 708.8 710 57.3
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 4.7e-201 705.3 713 56.9
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 6.1e-201 704.9 714 57.1
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 2.3e-200 703.0 709 58.1
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 4.0e-200 702.2 720 57.4
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 3.4e-199 699.1 709 56.7
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 3.4e-199 699.1 718 57.4
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.2e-198 696.4 709 56.6
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 4.9e-198 695.3 715 57.9
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 1.4e-197 693.7 714 56.6
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 2.4e-197 693.0 712 57.6
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 3.2e-197 692.6 712 56.2
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 7.0e-197 691.4 712 56.2
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 1.2e-196 690.6 713 56.2
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 3.5e-196 689.1 712 56.2
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 6.0e-196 688.3 713 55.8
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 5.6e-194 681.8 712 55.9
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 7.3e-194 681.4 712 56.7
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 3.6e-193 679.1 706 54.8
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.1e-192 676.0 715 55.9
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 1.5e-191 673.7 711 54.0
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 2.0e-191 673.3 711 53.9
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 2.2e-190 669.8 717 55.2
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 3.2e-189 666.0 727 54.9
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 4.1e-189 665.6 718 55.2
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 5.4e-189 665.2 712 53.9
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 7.8e-188 661.4 718 54.9
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 1.7e-187 660.2 710 54.6
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 2.3e-187 659.8 713 54.6
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 3.0e-187 659.4 717 55.1
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 3.9e-187 659.1 712 54.6
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 6.6e-187 658.3 716 54.1
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.8e-185 652.9 705 56.6
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 4.7e-185 652.1 718 54.2
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 4.7e-185 652.1 718 54.2
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 1.1e-184 651.0 715 54.4
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 2.0e-183 646.7 716 54.1
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 2.0e-183 646.7 714 54.9
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 4.4e-183 645.6 713 52.9
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 2.2e-182 643.3 714 54.3
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 6.4e-182 641.7 719 53.8
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 2.4e-173 613.2 727 52.3
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 2.3e-171 606.7 699 54.1
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 6.6e-171 605.1 716 51.3
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 4.8e-169 599.0 711 50.5
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 1.2e-167 594.3 723 50.5
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 8.4e-166 588.2 708 49.9
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 1.2e-164 584.3 712 50.8
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 1.6e-164 583.9 718 49.9
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 3.8e-158 562.8 711 48.5
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 1.9e-157 560.5 642 50.9
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 6.0e-156 555.4 688 51.2
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 6.7e-155 552.0 711 48.9
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.9e-154 550.4 374 75.9
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.9e-154 550.4 374 75.9
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 1.8e-144 517.3 742 46.2
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 7.9e-140 501.9 386 69.9
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 4.2e-133 479.6 550 53.6
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 7.2e-133 478.8 700 46.7
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 1.7e-129 467.6 736 41.4
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.9e-126 456.8 375 66.4
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 2.4e-120 437.2 325 71.4
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 1.2e-119 434.9 608 45.7
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 2.2e-113 414.1 323 68.7
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 5.9e-103 379.4 488 48.4
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 9.2e-96 355.5 392 54.8
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 3.5e-95 353.6 751 37.2
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 6.6e-94 349.4 774 36.6
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 1.5e-93 348.2 732 38.0
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 7.3e-93 345.9 711 37.0
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 1.4e-88 331.6 391 50.9
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 6.8e-83 312.8 388 48.5
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 7.8e-79 299.3 624 38.5
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 2.1e-71 274.6 346 47.4
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.7e-63 247.7 410 44.4
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.3e-62 244.6 340 46.5
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 2.1e-60 238.0 619 33.0
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 3.5e-55 220.7 868 27.8
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 3.6e-52 210.7 339 41.3
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.2e-49 201.4 152 71.7
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 1.4e-40 172.2 250 42.0
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 4.6e-39 167.2 158 55.7
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 4.3e-37 160.6 165 59.4
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 1.1e-35 156.0 250 42.0
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 1.1e-32 146.0 164 53.7
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 4.2e-32 144.1 395 29.6
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 3.3e-29 134.4 404 29.5
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 5.0e-25 120.6 69 87.0
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 4.2e-24 117.5 69 82.6
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 4.2e-24 117.5 512 26.6
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.6e-20 105.5 76 69.7
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 4.8e-20 104.0 57 91.2
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 5.5e-16 90.5 51 82.4
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 4.6e-15 87.4 51 80.4
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 7.9e-15 86.7 98 50.0
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 1.8e-14 85.5 82 46.3
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 5.1e-14 84.0 99 49.5
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 3.3e-13 81.3 57 70.2
Actinidia39149 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.7e-12 79.0 159 39.6
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 2.8e-12 78.2 418 27.5
MCO13G545 Micromonas commoda HOM05D003995 ORTHO05D004800 5.3e-11 73.9 107 37.4
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 1.2e-07 62.8 174 32.2
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 3.6e-07 61.2 92 42.4


User provided reference genes

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