Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017207.1 Olea europaea HOM05D002840 ORTHO05D003088 5.7e-87 324.3 177 100.0
Oeu040672.1 Olea europaea HOM05D002840 ORTHO05D003088 2.6e-31 139.4 133 58.6
Oeu040673.1 Olea europaea HOM05D002840 ORTHO05D003088 1.9e-29 133.3 133 57.1
vmacro14123 Vaccinium macrocarpon HOM05D002840 ORTHO05D003088 1.6e-20 103.6 145 50.3
Haze_08372 Corylus avellana HOM05D002840 ORTHO05D003088 6.0e-20 101.7 147 46.9
Actinidia31493 Actinidia chinensis HOM05D002840 ORTHO05D003088 1.8e-19 100.1 142 47.2
PGSC0003DMG400026245 Solanum tuberosum HOM05D002840 ORTHO05D003088 1.8e-19 100.1 143 49.0
Rhsim07G0119300 Rhododendron simsii HOM05D002840 ORTHO05D003088 6.7e-19 98.2 133 47.4
Actinidia10865 Actinidia chinensis HOM05D002840 ORTHO05D003088 1.9e-18 96.7 144 45.8
Lj8A276T43 Lonicera japonica HOM05D002840 ORTHO05D003088 2.5e-18 96.3 134 50.0
MD04G1055800 Malus domestica HOM05D002840 ORTHO05D003088 3.3e-18 95.9 144 45.1
Nitab4.5_0000185g0170 Nicotiana tabacum HOM05D002840 ORTHO05D003088 3.3e-18 95.9 130 48.5
SGA_v2.0_scaffold6G03162 Striga asiatica HOM05D002840 ORTHO05D003088 3.3e-18 95.9 133 51.1
CSS0038832 Camellia sinensis var. sinensis HOM05D002840 ORTHO05D003088 5.7e-18 95.1 143 47.6
FAN04G2804 Fragaria x ananassa HOM05D002840 ORTHO05D003088 5.7e-18 95.1 138 47.1
Sopen08g026390 Solanum pennellii HOM05D002840 ORTHO05D003088 7.4e-18 94.7 143 46.2
Migut.E01635 Erythranthe guttata HOM05D002840 ORTHO05D003088 9.6e-18 94.4 137 45.3
Sopen08g003130 Solanum pennellii HOM05D002840 ORTHO05D003088 1.6e-17 93.6 133 48.1
Cfa012324 Carpinus fangiana HOM05D002840 ORTHO05D003088 2.1e-17 93.2 144 45.1
Solyc08g077880.3 Solanum lycopersicum HOM05D002840 ORTHO05D003088 2.1e-17 93.2 143 46.2
Nitab4.5_0009451g0010 Nicotiana tabacum HOM05D002840 ORTHO05D003088 2.8e-17 92.8 139 47.5
Solyc08g007180.3 Solanum lycopersicum HOM05D002840 ORTHO05D003088 2.8e-17 92.8 133 48.9
MELO3C013899.2 Cucumis melo HOM05D002840 ORTHO05D003088 6.2e-17 91.7 141 44.0
Migut.E00893 Erythranthe guttata HOM05D002840 ORTHO05D003088 6.2e-17 91.7 137 44.5
Nitab4.5_0000500g0220 Nicotiana tabacum HOM05D002840 ORTHO05D003088 6.2e-17 91.7 139 46.8
Manes.02G045000 Manihot esculenta HOM05D002840 ORTHO05D003088 8.2e-17 91.3 136 42.6
Cc08_g11360 Coffea canephora HOM05D002840 ORTHO05D003088 1.8e-16 90.1 142 43.0
Manes.01G088500 Manihot esculenta HOM05D002840 ORTHO05D003088 1.8e-16 90.1 138 45.7
Nitab4.5_0006594g0060 Nicotiana tabacum HOM05D002840 ORTHO05D003088 3.1e-16 89.4 132 47.7
RcHm_v2.0_Chr7g0205511 Rosa chinensis HOM05D002840 ORTHO05D003088 4.1e-16 89.0 134 43.3
Peaxi162Scf00102g00088 Petunia axillaris HOM05D002840 ORTHO05D003088 1.2e-15 87.4 131 43.5
Duzib068G0843 Durio zibethinus HOM05D002840 ORTHO05D003088 2.6e-15 86.3 140 39.3
Glyma.17G147900 Glycine max HOM05D002840 ORTHO05D003088 2.6e-15 86.3 136 42.6
Ciclev10021868m.g Citrus clementina HOM05D002840 ORTHO05D003088 4.5e-15 85.5 132 44.7
CiPaw.11G072900 Carya illinoinensis HOM05D002840 ORTHO05D003088 5.8e-15 85.1 144 41.7
TAR375G0892 Trochodendron aralioides HOM05D002840 ORTHO05D003088 5.8e-15 85.1 147 43.5
CANSAT21G1182 Cannabis sativa HOM05D002840 ORTHO05D003088 7.6e-15 84.7 139 46.0
CsaV3_3G002290 Cucumis sativus L. HOM05D002840 ORTHO05D003088 7.6e-15 84.7 145 41.4
Gohir.A12G213000 Gossypium hirsutum HOM05D002840 ORTHO05D003088 7.6e-15 84.7 132 45.5
FvH4_5g20330 Fragaria vesca HOM05D002840 ORTHO05D003088 1.0e-14 84.3 139 42.4
MD06G1047300 Malus domestica HOM05D002840 ORTHO05D003088 1.0e-14 84.3 129 42.6
ClCG10G002240 Citrullus lanatus HOM05D002840 ORTHO05D003088 1.3e-14 84.0 147 43.5
Hma1.2p1_0840F.1_g226610 Hydrangea macrophylla HOM05D002840 ORTHO05D003088 1.3e-14 84.0 116 44.0
FAN18G0247 Fragaria x ananassa HOM05D002840 ORTHO05D003088 1.7e-14 83.6 136 42.6
FAN13G2006 Fragaria x ananassa HOM05D002840 ORTHO05D003088 2.2e-14 83.2 136 40.4
TWI15G0197 Tripterygium wilfordii HOM05D002840 ORTHO05D003088 2.2e-14 83.2 130 44.6
Potri.001G151300 Populus trichocarpa HOM05D002840 ORTHO05D003088 2.9e-14 82.8 130 43.8
PGSC0003DMG400020492 Solanum tuberosum HOM05D002840 ORTHO05D003088 5.0e-14 82.0 138 44.9
TAR636G1068 Trochodendron aralioides HOM05D002840 ORTHO05D003088 5.0e-14 82.0 143 42.0
Sabra03G0054100 Salix brachista HOM05D002840 ORTHO05D003088 8.4e-14 81.3 136 44.1
VMungo0251G3117 Vigna mungo HOM05D002840 ORTHO05D003088 8.4e-14 81.3 136 40.4
DCAR_005585 Daucus carota HOM05D002840 ORTHO05D003088 1.1e-13 80.9 140 40.7
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.1e-13 80.9 133 45.9
Eucgr.E00355 Eucalyptus grandis HOM05D002840 ORTHO05D003088 1.4e-13 80.5 139 44.6
Gohir.D08G183100 Gossypium hirsutum HOM05D002840 ORTHO05D003088 1.4e-13 80.5 129 41.1
Gohir.D12G215500 Gossypium hirsutum HOM05D002840 ORTHO05D003088 1.4e-13 80.5 132 43.9
Cpa.g.sc98.27 Carica papaya HOM05D002840 ORTHO05D003088 1.9e-13 80.1 123 44.7
FAN08G3190 Fragaria x ananassa HOM05D002840 ORTHO05D003088 1.9e-13 80.1 140 41.4
Gorai.004G192200 Gossypium raimondii HOM05D002840 ORTHO05D003088 1.9e-13 80.1 130 41.5
COL.COLO4_07199 Corchorus olitorius HOM05D002840 ORTHO05D003088 2.5e-13 79.7 129 40.3
Gohir.A08G163300 Gossypium hirsutum HOM05D002840 ORTHO05D003088 3.2e-13 79.3 130 40.8
Phvul.003G225000 Phaseolus vulgaris HOM05D002840 ORTHO05D003088 3.2e-13 79.3 135 39.3
SalBow8G2480 Salvia bowleyana HOM05D002840 ORTHO05D003088 3.2e-13 79.3 137 42.3
Thecc.03G240800 Theobroma cacao HOM05D002840 ORTHO05D003088 4.2e-13 79.0 132 36.4
EL10Ac5g12275 Beta vulgaris HOM05D002840 ORTHO05D003088 5.5e-13 78.6 132 43.2
Potri.003G083500 Populus trichocarpa HOM05D002840 ORTHO05D003088 5.5e-13 78.6 135 43.0
Sed0026673 Sechium edule HOM05D002840 ORTHO05D003088 7.2e-13 78.2 145 42.8
Dinv28875 Davidia involucrata HOM05D002840 ORTHO05D003088 9.3e-13 77.8 147 40.8
Atru.chr9.1211 Acer truncatum HOM05D002840 ORTHO05D003088 1.2e-12 77.4 139 41.0
Nn1g00765 Nelumbo nucifera HOM05D002840 ORTHO05D003088 1.6e-12 77.0 145 39.3
Lsat_1_v5_gn_6_95120 Lactuca sativa HOM05D002840 ORTHO05D003088 2.7e-12 76.3 131 43.5
Nn6g33763 Nelumbo nucifera HOM05D002840 ORTHO05D003088 3.5e-12 75.9 143 38.5
Hund11318 Selenicereus undatus HOM05D002840 ORTHO05D003088 3.5e-12 75.9 154 37.7
Duzib205G0050 Durio zibethinus HOM05D002840 ORTHO05D003088 4.6e-12 75.5 129 41.9
ECA233G4390 Erigeron canadensis HOM05D002840 ORTHO05D003088 6.1e-12 75.1 126 40.5
ECA240G0003 Erigeron canadensis HOM05D002840 ORTHO05D003088 6.1e-12 75.1 131 41.2
Gorai.008G231100 Gossypium raimondii HOM05D002840 ORTHO05D003088 6.1e-12 75.1 132 42.4
HanXRQChr13g0418271 Helianthus annuus HOM05D002840 ORTHO05D003088 6.1e-12 75.1 134 44.8
unitig_52.g17215 Utricularia gibba HOM05D002840 ORTHO05D003088 6.1e-12 75.1 117 45.3
CiPaw.12G055800 Carya illinoinensis HOM05D002840 ORTHO05D003088 1.0e-11 74.3 146 39.7
HanXRQChr03g0089741 Helianthus annuus HOM05D002840 ORTHO05D003088 1.0e-11 74.3 131 42.7
MSTRG.1952 Avicennia marina HOM05D002840 ORTHO05D003088 1.3e-11 73.9 137 45.3
Sabra04G0063000 Salix brachista HOM05D002840 ORTHO05D003088 1.3e-11 73.9 130 38.5
arahy.Tifrunner.gnm1.ann1.Z0I5FU Arachis hypogaea HOM05D002840 ORTHO05D003088 2.3e-11 73.2 134 40.3
Prupe.5G057100 Prunus persica HOM05D002840 ORTHO05D003088 3.9e-11 72.4 137 38.0
GSVIVG01003693001 Vitis vinifera HOM05D002840 ORTHO05D003088 5.1e-11 72.0 134 38.8
Migut.K01377 Erythranthe guttata HOM05D002840 ORTHO05D003088 8.7e-11 71.2 37 81.1
Lalb_Chr05g0220921 Lupinus albus HOM05D002840 ORTHO05D003088 8.7e-11 71.2 136 38.2
MBI04_g13853_MAGBIO Magnolia biondii HOM05D002840 ORTHO05D003088 1.1e-10 70.9 136 39.0
Lalb_Chr16g0386441 Lupinus albus HOM05D002840 ORTHO05D003088 1.9e-10 70.1 136 38.2
THA.LOC104812817 Tarenaya hassleriana HOM05D002840 ORTHO05D003088 1.9e-10 70.1 144 40.3
Lj4g0023884 Lotus japonicus HOM05D002840 ORTHO05D003088 3.3e-10 69.3 103 40.8
AagrBONN_evm.TU.Sc2ySwM_362.2157 Anthoceros agrestis HOM05D002840 ORTHO05D003088 4.3e-10 68.9 101 48.5
BcaC06g34285 Brassica carinata HOM05D002840 ORTHO05D003088 5.7e-10 68.6 119 37.0
Ah.12g054000 Amaranthus hybridus HOM05D002840 ORTHO05D003088 7.4e-10 68.2 135 37.8
C07p30810 Brassica napus HOM05D002840 ORTHO05D003088 7.4e-10 68.2 133 36.8
BolC7t43622H Brassica oleracea HOM05D002840 ORTHO05D003088 7.4e-10 68.2 133 36.8
Pp3c1_26740 Physcomitrium patens HOM05D002840 ORTHO05D003088 7.4e-10 68.2 85 47.1
QL12p008813 Quercus lobata HOM05D002840 ORTHO05D003088 7.4e-10 68.2 143 37.1
Ah.07g199180 Amaranthus hybridus HOM05D002840 ORTHO05D003088 9.7e-10 67.8 145 38.6
AT4G17600 Arabidopsis thaliana HOM05D002840 ORTHO05D003088 9.7e-10 67.8 111 41.4
A09p22860 Brassica napus HOM05D002840 ORTHO05D003088 9.7e-10 67.8 136 38.2
BraA06t27400Z Brassica rapa HOM05D002840 ORTHO05D003088 9.7e-10 67.8 141 38.3
Ca_22013_v3 Cicer arietinum L. HOM05D002840 ORTHO05D003088 9.7e-10 67.8 129 37.2
Sc01g0008000 Simmondsia chinensis HOM05D002840 ORTHO05D003088 9.7e-10 67.8 86 46.5
ATR0665G546 Amborella trichopoda HOM05D002840 ORTHO05D003088 1.3e-09 67.4 98 44.9
A06p45280 Brassica napus HOM05D001479 ORTHO05D003088 1.3e-09 67.4 142 37.3
AL7G37000 Arabidopsis lyrata HOM05D002840 ORTHO05D003088 1.6e-09 67.0 114 36.8
C09p29440 Brassica napus HOM05D002840 ORTHO05D003088 1.6e-09 67.0 123 37.4
Medtr4g099340 Medicago truncatula HOM05D002840 ORTHO05D003088 1.6e-09 67.0 139 36.7
TWI60G0531 Tripterygium wilfordii HOM05D002840 ORTHO05D003088 1.6e-09 67.0 101 37.6
Aqoxy3G02656 Aquilegia oxysepala HOM05D002840 ORTHO05D003088 2.2e-09 66.6 137 37.2
AUR62018842 Chenopodium quinoa HOM05D002840 ORTHO05D003088 2.2e-09 66.6 143 37.8
arahy.Tifrunner.gnm1.ann1.YIXS33 Arachis hypogaea HOM05D002840 ORTHO05D003088 2.8e-09 66.2 131 35.9
CDE02G1116 Ceratophyllum demersum HOM05D002840 ORTHO05D003088 2.8e-09 66.2 36 77.8
CDE11G0044 Ceratophyllum demersum HOM05D002840 ORTHO05D003088 2.8e-09 66.2 36 80.6
Dinv25133 Davidia involucrata HOM05D002840 ORTHO05D003088 2.8e-09 66.2 71 47.9
TPR.G17131 Trifolium pratense HOM05D002840 ORTHO05D003088 2.8e-09 66.2 134 35.8
BcaC06g31415 Brassica carinata HOM05D002840 ORTHO05D003088 3.7e-09 65.9 143 35.7
Pp3c2_19700 Physcomitrium patens HOM05D002840 ORTHO05D003088 4.8e-09 65.5 87 48.3
BcaB07g30792 Brassica carinata HOM05D002840 ORTHO05D003088 6.3e-09 65.1 141 36.2
BcaNung03455 Brassica carinata HOM05D002840 ORTHO05D003088 8.2e-09 64.7 47 63.8
A03p50540 Brassica napus HOM05D002840 ORTHO05D003088 8.2e-09 64.7 81 48.1
BraA02t08099Z Brassica rapa HOM05D002840 ORTHO05D003088 8.2e-09 64.7 133 38.3
CDE11G0936 Ceratophyllum demersum HOM05D002840 ORTHO05D003088 8.2e-09 64.7 35 80.0
Psat4g075640 Pisum sativum HOM05D002840 ORTHO05D003088 8.2e-09 64.7 137 40.9
HPP92_014883 Vanilla planifolia HOM05D002840 ORTHO05D003088 8.2e-09 64.7 109 41.3
BcaC04g21645 Brassica carinata HOM05D002840 ORTHO05D003088 1.1e-08 64.3 126 35.7
C07p48870 Brassica napus HOM05D002840 ORTHO05D003088 1.1e-08 64.3 88 43.2
BolC7t45395H Brassica oleracea HOM05D002840 ORTHO05D003088 1.1e-08 64.3 88 43.2
BolC9t55808H Brassica oleracea HOM05D002840 ORTHO05D003088 1.1e-08 64.3 126 35.7
Os02g0125700 Oryza sativa ssp. japonica HOM05D002840 ORTHO05D003088 1.4e-08 63.9 123 39.8
PGR042G0534 Punica granatum HOM05D002840 ORTHO05D003088 1.4e-08 63.9 131 35.1
Aa31sc58G50 Aethionema arabicum HOM05D002840 ORTHO05D003088 2.4e-08 63.2 128 35.9
BcaC06g33557 Brassica carinata HOM05D002840 ORTHO05D003088 2.4e-08 63.2 69 46.4
BcaNung06052 Brassica carinata HOM05D002840 ORTHO05D003088 2.4e-08 63.2 69 46.4
A02p30860 Brassica napus HOM05D002840 ORTHO05D003088 2.4e-08 63.2 127 38.6
AUR62007164 Chenopodium quinoa HOM05D002840 ORTHO05D003088 2.4e-08 63.2 118 40.7
PSO063G1214 Papaver somniferum HOM05D002840 ORTHO05D003088 2.4e-08 63.2 144 38.9
PSO782G0833 Papaver somniferum HOM05D002840 ORTHO05D003088 2.4e-08 63.2 57 54.4
CDE04G2971 Ceratophyllum demersum HOM05D002840 ORTHO05D003088 3.1e-08 62.8 90 41.1
Glyma.01G204700 Glycine max HOM05D002840 ORTHO05D003088 3.1e-08 62.8 54 53.7
Mapoly0001s0043 Marchantia polymorpha HOM05D002840 ORTHO05D003088 4.1e-08 62.4 86 45.3
BcaC03g16940 Brassica carinata HOM05D002840 ORTHO05D003088 5.3e-08 62.0 118 41.5
Thhalv10000997m.g Eutrema salsugineum HOM05D002840 ORTHO05D003088 5.3e-08 62.0 34 76.5
Glyma.05G066100 Glycine max HOM05D002840 ORTHO05D003088 5.3e-08 62.0 133 35.3
Sp7g16560 Schrenkiella parvula HOM05D002840 ORTHO05D003088 5.3e-08 62.0 95 38.9
Sp2g11920 Schrenkiella parvula HOM05D002840 ORTHO05D003088 6.9e-08 61.6 145 33.1
C02p48420 Brassica napus HOM05D002840 ORTHO05D003088 1.2e-07 60.8 127 39.4
BolC2t10872H Brassica oleracea HOM05D002840 ORTHO05D003088 1.2e-07 60.8 127 39.4
AL8G10970 Arabidopsis lyrata HOM05D002840 ORTHO05D003088 1.5e-07 60.5 126 36.5
BraA03t14143Z Brassica rapa HOM05D002840 ORTHO05D003088 1.5e-07 60.5 36 69.4
CAN.G572.7 Capsicum annuum HOM05D002840 ORTHO05D003088 1.5e-07 60.5 30 83.3
CARHR224320 Cardamine hirsuta HOM05D002840 ORTHO05D003088 1.5e-07 60.5 31 77.4
SMO171G0078 Selaginella moellendorffii HOM05D002840 ORTHO05D003088 1.5e-07 60.5 94 41.5
AT5G47110 Arabidopsis thaliana HOM05D002840 ORTHO05D003088 2.0e-07 60.1 139 34.5
arahy.Tifrunner.gnm1.ann1.ALKQ9T Arachis hypogaea HOM05D002840 ORTHO05D003088 2.0e-07 60.1 118 38.1
arahy.Tifrunner.gnm1.ann1.BV80JU Arachis hypogaea HOM05D002840 ORTHO05D003088 2.0e-07 60.1 118 38.1
CARHR174280 Cardamine hirsuta HOM05D002840 ORTHO05D003088 2.0e-07 60.1 140 31.4
Aa31LG6G340 Aethionema arabicum HOM05D002840 ORTHO05D003088 3.4e-07 59.3 29 79.3
Carub.0007s2379 Capsella rubella HOM05D002840 ORTHO05D003088 3.4e-07 59.3 112 33.9
Carub.0008s0064 Capsella rubella HOM05D002840 ORTHO05D003088 1.0e-06 57.8 136 32.4
BraA09t37888Z Brassica rapa HOM05D002840 ORTHO05D003088 1.3e-06 57.4 136 33.8
Pp3c14_9190 Physcomitrium patens HOM05D002840 ORTHO05D003088 1.3e-06 57.4 154 34.4
CBR_g89141 Chara braunii HOM05D002840 ORTHO05D003088 2.2e-06 56.6 66 43.9
Pp3c14_9180 Physcomitrium patens HOM05D002840 ORTHO05D003088 2.9e-06 56.2 70 40.0
PRCOL_00003530 Prasinoderma coloniale HOM05D002840 ORTHO05D003088 2.9e-06 56.2 42 54.8
CSS0003465 Camellia sinensis var. sinensis HOM05D002840 ORTHO05D003088 6.5e-06 55.1 49 51.0


User provided reference genes

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