Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.6e-213 746.1 456 100.0
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 3.7e-106 389.4 463 56.2
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 4.3e-102 375.9 459 56.9
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 8.9e-100 368.2 470 53.6
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 7.5e-99 365.2 470 53.8
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 9.2e-97 358.2 469 53.1
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 1.2e-96 357.8 461 53.4
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 2.3e-95 353.6 456 52.4
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 1.9e-94 350.5 467 53.1
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 3.3e-94 349.7 459 54.0
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.1e-93 347.1 458 57.6
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.8e-93 346.7 472 52.8
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 1.1e-92 344.7 467 53.3
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.4e-92 343.6 472 52.8
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.2e-91 341.3 491 50.3
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.2e-91 341.3 464 50.9
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 1.5e-91 340.9 459 51.0
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.7e-90 337.4 512 46.9
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 3.8e-90 336.3 469 51.2
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 4.9e-90 335.9 486 56.2
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 3.2e-89 333.2 470 54.3
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 4.1e-89 332.8 471 54.8
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 5.4e-89 332.4 461 50.8
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 7.8e-88 328.6 540 50.6
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 1.7e-87 327.4 496 48.8
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 3.0e-87 326.6 492 48.2
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 6.6e-87 325.5 480 57.9
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 1.5e-86 324.3 463 49.7
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.9e-86 323.9 468 50.6
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 4.3e-86 322.8 481 49.5
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 5.6e-86 322.4 460 55.4
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 7.3e-86 322.0 471 49.9
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 8.1e-85 318.5 498 47.4
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 1.8e-84 317.4 569 48.2
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.5e-83 314.3 471 55.8
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 7.6e-83 312.0 460 55.7
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 7.6e-83 312.0 460 55.7
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 9.9e-83 311.6 477 49.9
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 9.9e-83 311.6 473 48.0
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.7e-82 310.8 494 45.5
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 6.4e-82 308.9 485 49.5
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.4e-81 307.8 522 44.6
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 3.2e-81 306.6 483 46.0
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 5.4e-81 305.8 514 42.8
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 9.3e-81 305.1 473 46.1
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 1.6e-80 304.3 461 49.2
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 2.7e-80 303.5 512 44.5
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 3.5e-80 303.1 456 46.7
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 6.0e-80 302.4 472 50.8
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 7.8e-80 302.0 537 48.0
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 3.0e-79 300.1 485 50.5
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 5.1e-79 299.3 485 50.3
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 5.1e-79 299.3 468 51.1
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 5.1e-79 299.3 462 50.6
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 8.7e-79 298.5 475 50.9
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 8.7e-79 298.5 477 50.1
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 1.9e-78 297.4 467 45.8
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 1.9e-78 297.4 460 54.6
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 9.6e-78 295.0 458 47.6
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.3e-77 294.7 543 48.1
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.6e-77 294.3 475 49.7
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 2.8e-77 293.5 465 53.1
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 4.8e-77 292.7 503 44.5
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 4.8e-77 292.7 503 44.5
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 8.1e-77 292.0 473 46.9
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 8.1e-77 292.0 482 52.7
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 1.4e-76 291.2 509 49.5
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 3.1e-76 290.0 519 49.5
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 9.9e-75 285.0 583 42.2
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 1.7e-74 284.3 471 47.1
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 3.8e-74 283.1 471 46.9
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.6e-72 277.7 579 44.7
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 4.6e-72 276.2 490 48.4
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.0e-71 275.0 464 49.1
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 1.3e-71 274.6 461 46.0
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 2.3e-71 273.9 506 44.9
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 3.9e-71 273.1 568 42.1
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 1.5e-70 271.2 465 51.2
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.9e-70 270.8 467 46.0
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 1.3e-69 268.1 467 47.8
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 1.6e-69 267.7 509 46.6
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 2.4e-68 263.8 468 50.0
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.1e-68 263.5 613 44.4
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.1e-68 263.5 581 42.9
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.0e-67 260.8 510 45.5
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 1.3e-66 258.1 521 44.9
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 4.9e-66 256.1 534 49.6
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.1e-64 250.8 634 40.4
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 1.8e-63 247.7 624 39.9
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.8e-63 247.7 624 39.9
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 3.0e-63 246.9 632 37.7
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 3.9e-63 246.5 168 78.6
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 3.3e-62 243.4 554 38.1
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 3.3e-62 243.4 518 45.0
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 6.2e-61 239.2 501 42.1
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 3.1e-60 236.9 631 39.8
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 1.2e-59 235.0 556 42.6
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.0e-58 231.9 530 42.6
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.4e-57 228.0 659 34.9
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 3.0e-55 220.3 256 53.5
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.8e-53 213.8 459 37.0
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 2.6e-51 207.2 172 66.3
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 1.1e-49 201.8 169 65.1
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 1.1e-46 191.8 459 41.2
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.3e-45 188.3 355 48.7
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 5.5e-41 172.9 523 39.6
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 7.2e-41 172.6 169 60.4
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 5.1e-39 166.4 171 55.0
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.3e-37 159.5 428 36.4
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 5.3e-36 156.4 161 63.4
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 2.0e-35 154.5 94 88.3
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 5.9e-35 152.9 93 87.1
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 3.2e-33 147.1 175 52.0
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 7.2e-33 146.0 81 93.8
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 4.7e-32 143.3 93 82.8
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 3.9e-31 140.2 151 55.6
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 3.7e-29 133.7 350 42.3
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 3.5e-27 127.1 109 68.8
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 4.5e-27 126.7 183 51.4
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 2.3e-23 114.4 103 54.4
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 1.7e-21 108.2 178 36.5
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 6.3e-21 106.3 112 58.9
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.7e-19 100.9 63 82.5
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 4.5e-19 100.1 154 50.6
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.5e-17 94.4 440 26.8
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 5.5e-17 93.2 53 86.8
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 3.6e-16 90.5 53 84.9
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.4e-15 88.6 111 45.9
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 3.0e-15 87.4 178 34.3
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 2.0e-14 84.7 226 37.2
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 8.3e-13 79.3 100 44.0
Actinidia26768 Actinidia chinensis HOM05D005328 ORTHO05D006049 5.4e-12 76.6 56 71.4
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.0e-12 76.3 86 45.3
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 9.5e-09 65.9 148 37.8
Cfa024420 Carpinus fangiana HOM05D005328 ORTHO05D006049 2.1e-08 64.7 170 27.1
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 2.3e-07 61.2 122 42.6
Potri.016G000501 Populus trichocarpa HOM05D005328 ORTHO05D006049 5.7e-06 56.6 62 62.9


User provided reference genes

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