Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 1.5e-215 752.7 404 100.0
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 1.5e-106 390.6 601 50.6
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 9.3e-93 344.7 552 47.5
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 7.9e-92 341.7 653 44.0
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 3.7e-89 332.8 575 45.4
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 9.1e-88 328.2 627 43.7
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 1.0e-83 314.7 618 42.4
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 6.7e-83 312.0 634 42.3
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 3.7e-81 306.2 654 40.2
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 4.8e-81 305.8 588 41.8
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 5.3e-80 302.4 656 40.4
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 9.1e-80 301.6 652 40.2
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 4.5e-79 299.3 622 42.3
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 5.9e-79 298.9 654 39.8
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 7.7e-79 298.5 588 41.5
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 1.0e-78 298.1 653 39.7
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.3e-78 297.7 650 39.8
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 1.7e-78 297.4 651 39.8
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 8.5e-78 295.0 654 39.9
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 1.4e-77 294.3 655 39.7
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 5.5e-77 292.4 581 41.8
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 5.5e-77 292.4 590 41.4
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 7.2e-77 292.0 581 41.7
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 1.2e-76 291.2 595 41.0
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 2.1e-76 290.4 653 40.7
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 2.7e-76 290.0 589 41.4
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 8.0e-76 288.5 653 40.1
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 3.0e-75 286.6 654 39.9
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 3.0e-75 286.6 654 39.1
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 5.2e-75 285.8 648 40.4
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 6.3e-73 278.9 654 39.8
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 1.1e-72 278.1 656 38.1
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 4.1e-72 276.2 633 39.2
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 7.0e-72 275.4 657 37.9
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 7.0e-72 275.4 658 38.9
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 9.1e-72 275.0 417 48.4
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 1.2e-71 274.6 656 38.1
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 1.2e-71 274.6 601 40.4
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 2.0e-71 273.9 655 38.0
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 2.6e-71 273.5 657 38.8
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 3.5e-71 273.1 656 39.6
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 4.5e-71 272.7 593 39.6
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 4.5e-71 272.7 593 39.6
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 2.2e-70 270.4 651 39.0
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 2.2e-70 270.4 657 38.4
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 2.9e-70 270.0 651 38.4
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 3.8e-70 269.6 648 37.8
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 5.0e-70 269.2 632 38.3
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 6.5e-70 268.9 650 38.0
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.1e-69 268.1 651 38.7
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 6.1e-68 262.3 645 38.0
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 8.0e-68 261.9 658 37.2
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 2.3e-67 260.4 660 37.7
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 8.8e-67 258.5 655 38.5
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 8.8e-67 258.5 648 38.1
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.2e-66 258.1 648 38.1
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 1.2e-66 258.1 657 36.5
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 1.3e-65 254.6 655 36.2
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 3.7e-65 253.1 661 36.2
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 1.8e-64 250.8 654 38.1
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.6e-63 247.7 650 36.6
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 4.5e-63 246.1 608 37.8
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 7.7e-63 245.4 657 35.8
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 1.0e-62 245.0 652 36.0
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 1.3e-62 244.6 658 36.0
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 5.0e-62 242.7 649 36.5
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 5.0e-62 242.7 597 37.7
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 6.5e-62 242.3 665 36.4
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.5e-62 241.9 656 35.8
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 2.5e-61 240.4 645 35.7
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 2.5e-61 240.4 658 36.3
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 3.2e-61 240.0 648 35.2
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.2e-61 238.8 656 35.7
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.2e-61 238.8 656 35.7
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.7e-60 236.1 619 35.9
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 4.7e-60 236.1 659 35.4
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 8.0e-60 235.3 528 37.7
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 8.0e-60 235.3 528 37.7
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 2.3e-59 233.8 647 36.8
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 3.0e-59 233.4 637 34.9
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 8.8e-59 231.9 656 35.2
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 1.2e-58 231.5 637 34.7
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 1.2e-58 231.5 636 36.3
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 2.0e-58 230.7 649 35.1
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 2.0e-58 230.7 643 34.5
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-58 230.3 608 36.5
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 2.6e-58 230.3 641 36.7
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 5.7e-58 229.2 647 34.6
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 5.7e-58 229.2 645 34.7
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.7e-57 227.6 655 34.5
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 2.8e-57 226.9 398 42.7
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 3.7e-57 226.5 651 36.7
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 4.8e-57 226.1 430 40.5
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.8e-57 226.1 653 34.0
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 4.8e-57 226.1 642 35.4
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 6.3e-57 225.7 639 34.6
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 8.3e-57 225.3 634 34.7
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 1.1e-56 224.9 639 34.6
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 1.8e-56 224.2 564 38.1
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 2.4e-56 223.8 640 35.0
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 3.1e-56 223.4 602 35.2
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 7.0e-56 222.2 544 37.3
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 7.0e-56 222.2 544 37.3
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 9.1e-56 221.9 652 34.2
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 2.0e-55 220.7 651 34.3
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 4.5e-55 219.5 648 34.4
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 5.9e-55 219.2 652 34.7
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.7e-55 218.8 657 33.5
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 1.3e-54 218.0 648 34.3
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.3e-54 218.0 647 34.5
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-54 218.0 654 33.5
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 2.3e-54 217.2 638 34.8
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 2.9e-54 216.9 657 34.4
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 3.8e-54 216.5 650 34.0
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.5e-53 214.5 642 35.7
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 1.6e-52 211.1 643 36.4
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 1.6e-52 211.1 613 35.6
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 2.1e-52 210.7 622 34.2
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.4e-51 208.0 630 34.9
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.3e-51 207.2 656 32.6
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.5e-50 204.5 640 34.4
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.0e-50 204.1 581 35.1
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.6e-50 203.8 649 34.4
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 4.4e-50 203.0 598 33.1
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 5.7e-50 202.6 645 34.1
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 1.3e-49 201.4 655 33.3
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 2.2e-49 200.7 656 32.3
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 2.7e-47 193.7 634 33.3
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 3.5e-47 193.4 639 33.3
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 4.5e-47 193.0 612 33.5
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.3e-46 191.4 643 33.4
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.7e-46 191.0 590 34.9
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 1.1e-45 188.3 639 33.6
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.6e-45 186.0 643 32.8
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.8e-43 181.0 606 34.0
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 6.8e-43 179.1 644 32.8
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 8.9e-43 178.7 404 39.1
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 1.5e-42 177.9 551 32.8
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.5e-42 177.9 406 37.9
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 7.5e-42 175.6 363 39.1
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 1.7e-41 174.5 587 31.9
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 3.7e-41 173.3 551 32.5
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.9e-40 171.0 658 30.1
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 3.2e-40 170.2 410 37.1
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.2e-39 168.3 641 31.0
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.9e-38 163.3 608 31.1
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 5.6e-37 159.5 400 36.2
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 5.6e-37 159.5 591 32.8
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 9.5e-37 158.7 655 29.0
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 5.2e-35 152.9 417 34.8
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 5.2e-35 152.9 589 29.9
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 3.7e-33 146.7 284 40.8
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 6.4e-33 146.0 571 30.1
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 8.3e-33 145.6 651 30.4
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 3.9e-30 136.7 580 30.2
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 1.4e-27 128.3 367 32.2
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 6.4e-25 119.4 404 32.7
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 6.0e-23 112.8 628 27.1
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.3e-22 110.9 457 30.4
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 1.6e-20 104.8 531 28.8
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 5.8e-18 96.3 205 42.4
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 1.3e-17 95.1 279 32.6
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 2.2e-17 94.4 180 36.1
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 1.4e-11 75.1 111 42.3
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 1.1e-08 65.5 123 36.6


User provided reference genes

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