Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015952.1 Olea europaea HOM05D003777 ORTHO05D004690 0.0e+00 1211.8 661 100.0
SGA_v2.0_scaffold247G44863 Striga asiatica HOM05D003777 ORTHO05D004690 2.3e-274 948.7 689 75.3
Nitab4.5_0002026g0090 Nicotiana tabacum HOM05D003777 ORTHO05D004690 2.6e-273 945.3 664 77.0
Nitab4.5_0000492g0120 Nicotiana tabacum HOM05D003777 ORTHO05D004690 5.7e-273 944.1 664 76.7
Solyc11g062270.2 Solanum lycopersicum HOM05D003777 ORTHO05D004690 1.0e-269 933.3 654 77.8
Sopen11g024250 Solanum pennellii HOM05D003777 ORTHO05D004690 3.2e-268 928.3 654 77.5
MSTRG.12471 Avicennia marina HOM05D003777 ORTHO05D004690 7.2e-268 927.2 629 79.2
Dinv18168 Davidia involucrata HOM05D003777 ORTHO05D004690 1.7e-264 916.0 677 76.2
CAN.G487.1 Capsicum annuum HOM05D003777 ORTHO05D004690 2.3e-258 895.6 659 75.4
CSS0004768 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 4.4e-257 891.3 652 75.3
Peaxi162Scf00029g02527 Petunia axillaris HOM05D003777 ORTHO05D004690 6.3e-256 887.5 663 74.7
vmacro01091 Vaccinium macrocarpon HOM05D003777 ORTHO05D004690 2.3e-250 869.0 681 71.7
Migut.D00587 Erythranthe guttata HOM05D003777 ORTHO05D004690 2.2e-248 862.4 605 77.9
Actinidia08096 Actinidia chinensis HOM05D003777 ORTHO05D004690 2.4e-247 859.0 648 73.6
Dinv11003 Davidia involucrata HOM05D003777 ORTHO05D004690 9.2e-247 857.1 667 72.3
DCAR_021624 Daucus carota HOM05D003777 ORTHO05D004690 1.9e-244 849.4 642 70.4
Lsat_1_v5_gn_2_96961 Lactuca sativa HOM05D003777 ORTHO05D004690 1.2e-243 846.7 664 70.8
Hma1.2p1_0079F.1_g041650 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 1.8e-242 842.8 664 71.7
QL03p055332 Quercus lobata HOM05D003777 ORTHO05D004690 8.9e-242 840.5 606 75.7
Potri.006G216400 Populus trichocarpa HOM05D003777 ORTHO05D004690 8.3e-240 833.9 669 70.0
ECA233G1683 Erigeron canadensis HOM05D003777 ORTHO05D004690 1.1e-239 833.6 665 70.4
GSVIVG01010320001 Vitis vinifera HOM05D003777 ORTHO05D004690 1.4e-239 833.2 633 71.7
TAR374G1267 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.9e-239 832.8 626 72.4
unitig_744.g24046 Utricularia gibba HOM05D003777 ORTHO05D004690 1.2e-238 830.1 680 68.4
TAR374G0928 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.6e-238 829.7 626 72.2
CANSAT01G1767 Cannabis sativa HOM05D003777 ORTHO05D004690 3.5e-238 828.6 625 72.3
CiPaw.05G173500 Carya illinoinensis HOM05D003777 ORTHO05D004690 1.3e-237 826.6 645 71.0
Rhsim12G0035800 Rhododendron simsii HOM05D003777 ORTHO05D004690 3.3e-236 822.0 751 64.3
Sabra06G0166800 Salix brachista HOM05D003777 ORTHO05D004690 7.3e-236 820.8 624 71.0
DCAR_021625 Daucus carota HOM05D003777 ORTHO05D004690 4.0e-234 815.1 643 68.6
Thecc.02G272700 Theobroma cacao HOM05D003777 ORTHO05D004690 5.2e-234 814.7 674 67.5
TWI36G1566 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 9.8e-233 810.4 631 69.6
Nitab4.5_0002757g0020 Nicotiana tabacum HOM05D003777 ORTHO05D004690 2.9e-232 808.9 645 71.5
Phvul.002G176900 Phaseolus vulgaris HOM05D003777 ORTHO05D004690 6.4e-232 807.7 669 67.7
TWI75G0300 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 7.8e-230 800.8 631 68.9
PSO170G4787 Papaver somniferum HOM05D003777 ORTHO05D004690 1.3e-229 800.0 672 66.7
Sed0005823 Sechium edule HOM05D003777 ORTHO05D004690 3.0e-229 798.9 625 69.8
THA.LOC104825526 Tarenaya hassleriana HOM05D003777 ORTHO05D004690 3.9e-229 798.5 668 68.4
Hund25014 Selenicereus undatus HOM05D003777 ORTHO05D004690 6.6e-229 797.7 676 67.0
PSO063G1619 Papaver somniferum HOM05D003777 ORTHO05D004690 4.3e-228 795.0 625 69.0
Lj4g0007172 Lotus japonicus HOM05D003777 ORTHO05D004690 2.8e-227 792.3 671 68.0
HanXRQChr04g0126141 Helianthus annuus HOM05D003777 ORTHO05D004690 3.6e-227 792.0 632 69.3
Sp5g22670 Schrenkiella parvula HOM05D003777 ORTHO05D004690 6.2e-227 791.2 663 65.5
Aqoxy5G03557 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.2e-225 786.9 676 65.5
Cfa009302 Carpinus fangiana HOM05D003777 ORTHO05D004690 1.5e-225 786.6 683 67.3
Aa31LG4G12090 Aethionema arabicum HOM05D003777 ORTHO05D004690 9.9e-225 783.9 661 67.8
BcaB03g15177 Brassica carinata HOM05D003777 ORTHO05D004690 3.7e-224 781.9 662 65.9
CsaV3_5G030580 Cucumis sativus L. HOM05D003777 ORTHO05D004690 1.4e-223 780.0 673 65.8
Manes.12G016400 Manihot esculenta HOM05D003777 ORTHO05D004690 4.1e-223 778.5 670 65.8
BcaC08g46176 Brassica carinata HOM05D003777 ORTHO05D004690 5.4e-223 778.1 662 65.3
C06p42580 Brassica napus HOM05D003777 ORTHO05D004690 5.4e-223 778.1 662 65.3
BolC6t39181H Brassica oleracea HOM05D003777 ORTHO05D004690 5.4e-223 778.1 662 65.3
MD16G1110000 Malus domestica HOM05D003777 ORTHO05D004690 5.4e-223 778.1 673 66.6
Glyma.05G144700 Glycine max HOM05D003777 ORTHO05D004690 7.1e-223 777.7 623 68.4
MD13G1110100 Malus domestica HOM05D003777 ORTHO05D004690 9.2e-223 777.3 673 66.0
arahy.Tifrunner.gnm1.ann1.SED4J7 Arachis hypogaea HOM05D003777 ORTHO05D004690 3.5e-222 775.4 703 62.3
ClCG05G026250 Citrullus lanatus HOM05D003777 ORTHO05D004690 3.5e-222 775.4 675 65.8
Ca_18071_v3 Cicer arietinum L. HOM05D003777 ORTHO05D004690 6.0e-222 774.6 670 65.8
Cpa.g.sc86.2 Carica papaya HOM05D003777 ORTHO05D004690 1.0e-221 773.9 659 67.7
MELO3C011898.2 Cucumis melo HOM05D003777 ORTHO05D004690 3.9e-221 771.9 648 66.8
Duzib248G0478 Durio zibethinus HOM05D003777 ORTHO05D004690 6.6e-221 771.2 677 66.2
Gohir.D05G312600 Gossypium hirsutum HOM05D003777 ORTHO05D004690 8.6e-221 770.8 676 66.0
Gohir.A05G311500 Gossypium hirsutum HOM05D003777 ORTHO05D004690 2.5e-220 769.2 676 65.7
PGR102G0273 Punica granatum HOM05D003777 ORTHO05D004690 4.3e-220 768.5 670 65.8
AL2G26380 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 3.6e-219 765.4 659 65.3
AUR62017151 Chenopodium quinoa HOM05D003777 ORTHO05D004690 6.2e-219 764.6 677 64.3
A07p32470 Brassica napus HOM05D003777 ORTHO05D004690 1.1e-218 763.8 660 64.7
Atru.chr11.2223 Acer truncatum HOM05D003777 ORTHO05D004690 1.4e-218 763.5 673 64.5
Duzib268G0959 Durio zibethinus HOM05D003777 ORTHO05D004690 1.4e-218 763.5 676 65.4
RcHm_v2.0_Chr4g0431581 Rosa chinensis HOM05D003777 ORTHO05D004690 1.8e-218 763.1 668 65.6
Gorai.009G334100 Gossypium raimondii HOM05D003777 ORTHO05D004690 3.1e-218 762.3 674 65.6
Psat7g080080 Pisum sativum HOM05D003777 ORTHO05D004690 3.1e-218 762.3 675 64.7
RcHm_v2.0_Chr4g0431561 Rosa chinensis HOM05D003777 ORTHO05D004690 4.0e-218 761.9 668 65.4
arahy.Tifrunner.gnm1.ann1.238UV6 Arachis hypogaea HOM05D003777 ORTHO05D004690 6.8e-218 761.1 668 64.4
Thhalv10018246m.g Eutrema salsugineum HOM05D003777 ORTHO05D004690 6.8e-218 761.1 666 64.7
Ah.10g034950 Amaranthus hybridus HOM05D003777 ORTHO05D004690 8.9e-218 760.8 624 66.5
Carub.0002s1406 Capsella rubella HOM05D003777 ORTHO05D004690 1.2e-217 760.4 665 63.9
CARHR060270 Cardamine hirsuta HOM05D003777 ORTHO05D004690 1.5e-217 760.0 634 66.9
Actinidia30683 Actinidia chinensis HOM05D003777 ORTHO05D004690 2.0e-217 759.6 653 67.7
Manes.13G014300 Manihot esculenta HOM05D003777 ORTHO05D004690 2.0e-217 759.6 625 67.2
AT1G67680 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 4.4e-217 758.4 672 64.6
arahy.Tifrunner.gnm1.ann1.9WV3XJ Arachis hypogaea HOM05D003777 ORTHO05D004690 4.4e-217 758.4 668 64.4
FvH4_4g24580 Fragaria vesca HOM05D003777 ORTHO05D004690 1.4e-215 753.4 669 64.3
FAN12G3799 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.4e-215 752.7 669 64.3
Medtr8g079990 Medicago truncatula HOM05D003777 ORTHO05D004690 4.2e-215 751.9 641 65.8
FAN07G0030 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.7e-214 749.2 669 63.8
Glyma.08G101100 Glycine max HOM05D003777 ORTHO05D004690 2.7e-214 749.2 637 65.6
A07p34190 Brassica napus HOM05D003777 ORTHO05D004690 4.6e-214 748.4 662 64.2
AUR62035656 Chenopodium quinoa HOM05D003777 ORTHO05D004690 2.3e-213 746.1 676 62.3
arahy.Tifrunner.gnm1.ann1.35MH8V Arachis hypogaea HOM05D003777 ORTHO05D004690 3.0e-213 745.7 684 62.4
CSS0018349 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 3.9e-213 745.3 512 76.2
FAN17G2971 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.3e-211 740.3 650 64.6
FAN22G1648 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.6e-211 740.0 669 63.4
EL10Ac9g22111 Beta vulgaris HOM05D003777 ORTHO05D004690 2.1e-211 739.6 676 63.2
Eucgr.B03455 Eucalyptus grandis HOM05D003777 ORTHO05D004690 4.8e-211 738.4 675 63.6
VMungo0251G0828 Vigna mungo HOM05D003777 ORTHO05D004690 1.1e-210 737.3 711 61.6
TPR.G17105 Trifolium pratense HOM05D003777 ORTHO05D004690 2.4e-210 736.1 670 63.3
Lalb_Chr07g0187251 Lupinus albus HOM05D003777 ORTHO05D004690 5.8e-209 731.5 668 63.2
Prupe.1G234800 Prunus persica HOM05D003777 ORTHO05D004690 8.4e-208 727.6 574 72.0
Nitab4.5_0001925g0190 Nicotiana tabacum HOM05D003777 ORTHO05D004690 5.3e-202 708.4 621 65.9
MBI11_g31858_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 1.4e-199 700.3 686 60.8
Ciclev10030955m.g Citrus clementina HOM05D003777 ORTHO05D004690 5.5e-199 698.4 639 64.2
AT1G67650 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 1.2e-198 697.2 671 59.0
PGSC0003DMG400032494 Solanum tuberosum HOM05D003777 ORTHO05D004690 5.1e-197 691.8 474 76.8
CDE07G0923 Ceratophyllum demersum HOM05D003777 ORTHO05D004690 7.4e-196 688.0 672 59.1
HPP92_012793 Vanilla planifolia HOM05D003777 ORTHO05D004690 6.9e-194 681.4 676 58.6
Os01g0889000 Oryza sativa ssp. japonica HOM05D003777 ORTHO05D004690 2.7e-190 669.5 674 57.0
TPR.G27143 Trifolium pratense HOM05D003777 ORTHO05D004690 7.9e-190 667.9 538 66.2
COL.COLO4_23602 Corchorus olitorius HOM05D003777 ORTHO05D004690 1.9e-188 663.3 669 57.8
BraA07t31048Z Brassica rapa HOM05D003777 ORTHO05D004690 2.8e-187 659.4 563 63.9
Sc04g0009890 Simmondsia chinensis HOM05D003777 ORTHO05D004690 9.0e-186 654.4 511 70.6
Sed0021346 Sechium edule HOM05D003777 ORTHO05D004690 4.6e-182 642.1 550 66.7
ATR0824G106 Amborella trichopoda HOM05D003777 ORTHO05D004690 6.1e-182 641.7 672 56.4
BcaB03g15368 Brassica carinata HOM05D003777 ORTHO05D004690 2.5e-180 636.3 660 57.7
Lj2C633G4 Lonicera japonica HOM05D003777 ORTHO05D004690 3.7e-179 632.5 510 68.4
Carub.0002s1402 Capsella rubella HOM05D003777 ORTHO05D004690 3.8e-168 595.9 543 63.7
AL2G26340 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 3.0e-165 586.3 645 54.9
BolC2t08468H Brassica oleracea HOM05D003777 ORTHO05D004690 1.5e-151 540.8 643 51.6
CSS0034811 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 5.5e-151 538.9 448 68.8
SEGI_14731 Sequoiadendron giganteum HOM05D003777 ORTHO05D004690 2.7e-150 536.6 551 54.6
Mapoly0007s0138 Marchantia polymorpha HOM05D003777 ORTHO05D004690 1.0e-149 534.6 649 47.1
Zm00001eb145240 Zea mays HOM05D003777 ORTHO05D004690 9.4e-143 511.5 495 58.4
Lalb_Chr12g0206451 Lupinus albus HOM05D003777 ORTHO05D004690 3.0e-141 506.5 459 64.1
C06p38540 Brassica napus HOM05D003777 ORTHO05D004690 1.4e-138 497.7 453 60.3
Lalb_Chr12g0206431 Lupinus albus HOM05D003777 ORTHO05D004690 2.4e-138 496.9 452 63.9
Pp3c19_7700 Physcomitrium patens HOM05D003777 ORTHO05D004690 1.7e-136 490.7 683 43.9
SHI17928 Sapria himalayana HOM05D003777 ORTHO05D004690 2.9e-136 490.0 662 48.3
BolC6t38947H Brassica oleracea HOM05D003777 ORTHO05D004690 2.3e-120 437.2 411 59.1
SMO356G0370 Selaginella moellendorffii HOM05D003777 ORTHO05D004690 5.8e-116 422.5 632 42.4
CBR_g26341 Chara braunii HOM05D003777 ORTHO05D004690 6.4e-115 419.1 629 43.4
Lalb_Chr12g0206401 Lupinus albus HOM05D003777 ORTHO05D004690 9.9e-108 395.2 335 62.4
C02p23330 Brassica napus HOM05D003777 ORTHO05D004690 1.9e-106 391.0 641 42.1
TAR622G1358 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.7e-105 387.1 332 68.4
Oeu007469.1 Olea europaea HOM05D003777 ORTHO05D004690 1.1e-93 348.6 320 65.6
AUR62017138 Chenopodium quinoa HOM05D003777 ORTHO05D004690 2.6e-84 317.4 349 53.0
CSS0039153 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 8.7e-72 275.8 198 74.2
ECA238G3243 Erigeron canadensis HOM05D003777 ORTHO05D004690 1.1e-69 268.9 224 62.5
Hma1.2p1_0075F.1_g039220 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 5.9e-68 263.1 240 63.8
PGSC0003DMG400024128 Solanum tuberosum HOM05D003777 ORTHO05D004690 3.8e-67 260.4 188 72.9
PGSC0003DMG400017991 Solanum tuberosum HOM05D003777 ORTHO05D004690 8.5e-67 259.2 174 78.2
MCO13G157 Micromonas commoda HOM05D003777 ORTHO05D004690 1.9e-66 258.1 682 33.3
BraA07t30871Z Brassica rapa HOM05D003777 ORTHO05D004690 2.5e-63 247.7 209 63.2
TAR622G0547 Trochodendron aralioides HOM05D003777 ORTHO05D004690 4.6e-57 226.9 169 71.6
Cre03.g182500 Chlamydomonas reinhardtii HOM05D003777 ORTHO05D004690 5.1e-56 223.4 748 30.1
PGSC0003DMG400024126 Solanum tuberosum HOM05D003777 ORTHO05D004690 2.0e-55 221.5 162 78.4
Solyc10g044443.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 3.3e-55 220.7 177 66.1
Sopen01g018830 Solanum pennellii HOM05D003777 ORTHO05D004690 1.4e-53 215.3 177 64.4
Nn4g21997 Nelumbo nucifera HOM05D003777 ORTHO05D004690 5.3e-53 213.4 188 69.1
Sopen01g018820 Solanum pennellii HOM05D003777 ORTHO05D004690 1.3e-51 208.8 174 66.1
PRCOL_00006597 Prasinoderma coloniale HOM05D003777 ORTHO05D004690 1.6e-49 201.8 702 30.2
Psat3g102200 Pisum sativum HOM05D003777 ORTHO05D004690 3.7e-46 190.7 151 68.2
Psat5g044680 Pisum sativum HOM05D003777 ORTHO05D004690 8.2e-46 189.5 151 68.2
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 9.4e-42 176.0 117 81.2
Aqoxy6G02118 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.2e-39 169.1 128 71.1
CAN.G1295.1 Capsicum annuum HOM05D003777 ORTHO05D004690 2.8e-38 164.5 149 64.4
Aqoxy6G02120 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 2.5e-34 151.4 136 65.4
Lalb_Chr12g0206411 Lupinus albus HOM05D003777 ORTHO05D004690 2.8e-30 137.9 92 80.4
Lalb_Chr12g0206441 Lupinus albus HOM05D003777 ORTHO05D004690 2.8e-30 137.9 92 80.4
Lalb_Chr12g0206461 Lupinus albus HOM05D003777 ORTHO05D004690 2.8e-30 137.9 92 80.4
CAN.G1310.4 Capsicum annuum HOM05D003777 ORTHO05D004690 3.5e-28 131.0 92 77.2
Psat3g103880 Pisum sativum HOM05D003777 ORTHO05D004690 2.9e-27 127.9 183 44.3
Aqoxy6G02119 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.9e-26 125.2 100 65.0
Lalb_Chr12g0206421 Lupinus albus HOM05D003777 ORTHO05D004690 4.2e-26 124.0 111 61.3
TAR622G0255 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.2e-22 111.7 100 61.0
MBI11_g11081_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 5.4e-21 107.1 98 58.2
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 2.0e-20 105.1 95 56.8
MBI11_g45427_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 3.5e-20 104.4 95 58.9
C06p38550 Brassica napus HOM05D003777 ORTHO05D004690 1.0e-19 102.8 104 64.4
Solyc01g047580.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 5.0e-19 100.5 119 53.8
BcaC03g14865 Brassica carinata HOM05D003777 ORTHO05D004690 3.0e-16 91.3 100 54.0
PGSC0003DMG400024133 Solanum tuberosum HOM05D003777 ORTHO05D004690 6.8e-16 90.1 58 81.0
Psat4g130680 Pisum sativum HOM05D003777 ORTHO05D037365 2.9e-14 84.7 89 49.4
SEGI_18986 Sequoiadendron giganteum HOM05D003777 ORTHO05D000001 6.4e-14 83.6 180 32.2
Nitab4.5_0004629g0100 Nicotiana tabacum HOM05D003777 ORTHO05D004690 8.3e-14 83.2 67 61.2
BcaC03g14858 Brassica carinata HOM05D003777 ORTHO05D004690 1.1e-13 82.8 84 54.8
SHI17930 Sapria himalayana HOM05D003777 ORTHO05D012379 1.7e-11 75.5 93 47.3
Cfa022335 Carpinus fangiana HOM05D003777 ORTHO05D004690 6.6e-11 73.6 656 21.6
Actinidia09282 Actinidia chinensis HOM05D003777 ORTHO05D004690 2.5e-10 71.6 332 31.0
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 1.8e-08 65.5 48 75.0
Nitab4.5_0004750g0060 Nicotiana tabacum HOM05D003777 ORTHO05D012379 3.7e-06 57.8 49 63.3
TAR625G1055 Trochodendron aralioides HOM05D003777 ORTHO05D012379 3.7e-06 57.8 48 62.5
Hma1.2p1_0214F.1_g090690 Hydrangea macrophylla HOM05D003777 ORTHO05D012379 6.4e-06 57.0 48 64.6


User provided reference genes

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