Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015939.1 Olea europaea HOM05D001730 ORTHO05D023306 2.5e-64 248.8 142 100.0
Oeu000840.3 Olea europaea HOM05D001730 ORTHO05D004519 1.0e-25 120.6 79 82.3
Migut.H00682 Erythranthe guttata HOM05D001730 ORTHO05D004519 2.6e-21 105.9 78 71.8
MSTRG.23920 Avicennia marina HOM05D001730 ORTHO05D004519 5.7e-21 104.8 79 70.9
MSTRG.3335 Avicennia marina HOM05D001730 ORTHO05D004519 7.5e-21 104.4 79 72.2
Dinv11510 Davidia involucrata HOM05D001730 ORTHO05D004519 3.7e-20 102.1 77 71.4
Dinv33778 Davidia involucrata HOM05D001730 ORTHO05D004519 1.1e-19 100.5 75 69.3
SGA_v2.0_scaffold4G02433 Striga asiatica HOM05D001730 ORTHO05D004519 2.4e-19 99.4 78 71.8
Cc07_g03590 Coffea canephora HOM05D001730 ORTHO05D004519 2.0e-18 96.3 74 70.3
Actinidia26229 Actinidia chinensis HOM05D001730 ORTHO05D004519 3.5e-18 95.5 79 64.6
Actinidia17559 Actinidia chinensis HOM05D001730 ORTHO05D023306 1.3e-17 93.6 71 70.4
Actinidia26230 Actinidia chinensis HOM05D001730 ORTHO05D004519 1.7e-17 93.2 79 65.8
Solyc02g067180.3 Solanum lycopersicum HOM05D001730 ORTHO05D004519 5.0e-17 91.7 90 55.6
Nitab4.5_0000568g0140 Nicotiana tabacum HOM05D001730 ORTHO05D004519 1.5e-16 90.1 68 70.6
Sopen02g016340 Solanum pennellii HOM05D001730 ORTHO05D004519 1.9e-16 89.7 90 54.4
Nitab4.5_0001591g0250 Nicotiana tabacum HOM05D001730 ORTHO05D004519 3.3e-16 89.0 69 68.1
PGSC0003DMG400008477 Solanum tuberosum HOM05D001730 ORTHO05D004519 3.3e-16 89.0 75 62.7
CAN.G979.1 Capsicum annuum HOM05D001730 ORTHO05D004519 7.2e-16 87.8 91 53.8
Nitab4.5_0000212g0080 Nicotiana tabacum HOM05D001730 ORTHO05D004519 9.5e-16 87.4 85 56.5
Rhsim08G0071000 Rhododendron simsii HOM05D001730 ORTHO05D004519 9.5e-16 87.4 72 69.4
Hma1.2p1_0409F.1_g146780 Hydrangea macrophylla HOM05D001730 ORTHO05D004519 2.8e-15 85.9 88 55.7
CSS0001636 Camellia sinensis var. sinensis HOM05D001730 ORTHO05D004519 3.6e-15 85.5 74 62.2
CSS0022883 Camellia sinensis var. sinensis HOM05D001730 ORTHO05D004519 3.6e-15 85.5 74 62.2
Migut.K01306 Erythranthe guttata HOM05D001730 ORTHO05D004519 3.6e-15 85.5 65 72.3
Peaxi162Scf00629g00115 Petunia axillaris HOM05D001730 ORTHO05D004519 6.1e-15 84.7 80 56.2
Lsat_1_v5_gn_4_169480 Lactuca sativa HOM05D001730 ORTHO05D004519 8.0e-15 84.3 76 61.8
HanXRQChr09g0262661 Helianthus annuus HOM05D001730 ORTHO05D004519 5.2e-14 81.6 69 59.4
FAN09G3279 Fragaria x ananassa HOM05D001730 ORTHO05D004519 6.8e-14 81.3 69 58.0
Peaxi162Scf00451g00513 Petunia axillaris HOM05D001730 ORTHO05D004519 8.9e-14 80.9 71 64.8
vmacro18181 Vaccinium macrocarpon HOM05D001730 ORTHO05D004519 8.9e-14 80.9 74 64.9
EL10Ac2g03004 Beta vulgaris HOM05D001730 ORTHO05D004519 1.2e-13 80.5 70 65.7
FAN05G3129 Fragaria x ananassa HOM05D001730 ORTHO05D004519 1.2e-13 80.5 76 55.3
FAN14G4386 Fragaria x ananassa HOM05D001730 ORTHO05D004519 1.2e-13 80.5 76 55.3
Nitab4.5_0003975g0010 Nicotiana tabacum HOM05D001730 ORTHO05D004519 1.2e-13 80.5 74 63.5
PGR004G0017 Punica granatum HOM05D001730 ORTHO05D004519 1.2e-13 80.5 82 57.3
FvH4_6g48090 Fragaria vesca HOM05D001730 ORTHO05D004519 1.5e-13 80.1 76 55.3
MD09G1054200 Malus domestica HOM05D001730 ORTHO05D004519 1.5e-13 80.1 84 57.1
FAN02G1975 Fragaria x ananassa HOM05D001730 ORTHO05D004519 2.6e-13 79.3 76 55.3
Lalb_Chr02g0159171 Lupinus albus HOM05D001730 ORTHO05D004519 2.6e-13 79.3 76 51.3
RcHm_v2.0_Chr2g0167411 Rosa chinensis HOM05D001730 ORTHO05D004519 2.6e-13 79.3 76 55.3
Lj3C1034G14 Lonicera japonica HOM05D001730 ORTHO05D004519 3.4e-13 79.0 83 53.0
Hund13191 Selenicereus undatus HOM05D001730 ORTHO05D004519 3.4e-13 79.0 93 52.7
TAR365G0180 Trochodendron aralioides HOM05D001730 ORTHO05D004519 4.4e-13 78.6 76 60.5
CAN.G127.23 Capsicum annuum HOM05D001730 ORTHO05D004519 7.5e-13 77.8 75 54.7
HanXRQChr11g0325161 Helianthus annuus HOM05D001730 ORTHO05D004519 7.5e-13 77.8 64 64.1
Prupe.3G264300 Prunus persica HOM05D001730 ORTHO05D004519 7.5e-13 77.8 78 56.4
VMungo1383G2111 Vigna mungo HOM05D001730 ORTHO05D004519 7.5e-13 77.8 86 50.0
Ah.10g031760 Amaranthus hybridus HOM05D001730 ORTHO05D004519 9.8e-13 77.4 71 62.0
Lj1g0005155 Lotus japonicus HOM05D001730 ORTHO05D004519 1.3e-12 77.0 89 48.3
Aqoxy3G03468 Aquilegia oxysepala HOM05D001730 ORTHO05D004519 1.7e-12 76.6 74 58.1
AUR62018105 Chenopodium quinoa HOM05D001730 ORTHO05D004519 1.7e-12 76.6 60 65.0
AUR62034439 Chenopodium quinoa HOM05D001730 ORTHO05D004519 1.7e-12 76.6 60 65.0
Glyma.09G235400 Glycine max HOM05D001730 ORTHO05D004519 1.7e-12 76.6 91 46.2
Manes.01G093400 Manihot esculenta HOM05D001730 ORTHO05D004519 1.7e-12 76.6 80 56.2
Thecc.04G086600 Theobroma cacao HOM05D001730 ORTHO05D004519 1.7e-12 76.6 49 73.5
DCAR_025856 Daucus carota HOM05D001730 ORTHO05D004519 2.8e-12 75.9 42 85.7
Gorai.012G052100 Gossypium raimondii HOM05D001730 ORTHO05D004519 3.7e-12 75.5 88 54.5
Nitab4.5_0000118g0010 Nicotiana tabacum HOM05D001730 ORTHO05D004519 3.7e-12 75.5 58 69.0
TAR622G1345 Trochodendron aralioides HOM05D001730 ORTHO05D004519 3.7e-12 75.5 76 56.6
Cfa007583 Carpinus fangiana HOM05D001730 ORTHO05D004519 4.9e-12 75.1 48 77.1
SalBow1G3742 Salvia bowleyana HOM05D001730 ORTHO05D004519 4.9e-12 75.1 48 72.9
MD17G1051900 Malus domestica HOM05D001730 ORTHO05D004519 6.3e-12 74.7 80 56.2
Manes.02G048100 Manihot esculenta HOM05D001730 ORTHO05D004519 6.3e-12 74.7 80 51.2
Cpa.g.c28082.1 Carica papaya HOM05D001730 ORTHO05D004519 8.3e-12 74.3 57 64.9
Haze_14505 Corylus avellana HOM05D001730 ORTHO05D004519 8.3e-12 74.3 41 82.9
Phvul.008G038100 Phaseolus vulgaris HOM05D001730 ORTHO05D004519 8.3e-12 74.3 92 47.8
Atru.chr8.312 Acer truncatum HOM05D001730 ORTHO05D004519 1.1e-11 73.9 74 55.4
CANSAT64G1919 Cannabis sativa HOM05D001730 ORTHO05D004519 1.1e-11 73.9 49 69.4
Gohir.D04G046900 Gossypium hirsutum HOM05D001730 ORTHO05D004519 1.1e-11 73.9 88 54.5
CDE02G0445 Ceratophyllum demersum HOM05D001730 ORTHO05D004519 1.8e-11 73.2 49 69.4
ECA232G2365 Erigeron canadensis HOM05D001730 ORTHO05D004519 1.8e-11 73.2 64 59.4
arahy.Tifrunner.gnm1.ann1.AGM2GS Arachis hypogaea HOM05D001730 ORTHO05D004519 2.4e-11 72.8 73 57.5
Eucgr.I01959 Eucalyptus grandis HOM05D001730 ORTHO05D004519 2.4e-11 72.8 41 82.9
Glyma.18G261600 Glycine max HOM05D001730 ORTHO05D004519 2.4e-11 72.8 91 44.0
Potri.017G086500 Populus trichocarpa HOM05D001730 ORTHO05D004519 2.4e-11 72.8 47 70.2
arahy.Tifrunner.gnm1.ann1.S7AN2D Arachis hypogaea HOM05D001730 ORTHO05D004519 3.1e-11 72.4 73 56.2
COL.COLO4_10343 Corchorus olitorius HOM05D001730 ORTHO05D004519 3.1e-11 72.4 42 81.0
Gohir.A05G368400 Gossypium hirsutum HOM05D001730 ORTHO05D004519 3.1e-11 72.4 90 51.1
Ciclev10011434m.g Citrus clementina HOM05D001730 ORTHO05D004519 4.1e-11 72.0 40 82.5
Dinv34126 Davidia involucrata HOM05D001730 ORTHO05D004519 4.1e-11 72.0 102 47.1
Sabra17G0076200 Salix brachista HOM05D001730 ORTHO05D004519 4.1e-11 72.0 44 72.7
TWI60G1242 Tripterygium wilfordii HOM05D001730 ORTHO05D004519 4.1e-11 72.0 43 76.7
PSO832G3607 Papaver somniferum HOM05D001730 ORTHO05D004519 5.4e-11 71.6 63 61.9
Psat3g199280 Pisum sativum HOM05D001730 ORTHO05D004519 5.4e-11 71.6 83 47.0
Duzib187G1340 Durio zibethinus HOM05D001730 ORTHO05D004519 7.0e-11 71.2 44 77.3
Gorai.001G240000 Gossypium raimondii HOM05D001730 ORTHO05D004519 9.2e-11 70.9 40 82.5
Peaxi162Scf00166g01052 Petunia axillaris HOM05D001730 ORTHO05D004519 9.2e-11 70.9 76 55.3
Ca_06787_v3 Cicer arietinum L. HOM05D001730 ORTHO05D004519 1.2e-10 70.5 94 41.5
PSO063G6669 Papaver somniferum HOM05D001730 ORTHO05D004519 1.2e-10 70.5 79 50.6
TPR.G33603 Trifolium pratense HOM05D001730 ORTHO05D004519 1.2e-10 70.5 84 44.0
CiPaw.03G024300 Carya illinoinensis HOM05D001730 ORTHO05D004519 2.0e-10 69.7 40 80.0
CDE09G0505 Ceratophyllum demersum HOM05D001730 ORTHO05D004519 2.0e-10 69.7 42 78.6
ClCG10G015340 Citrullus lanatus HOM05D001730 ORTHO05D004519 2.0e-10 69.7 44 77.3
MELO3C009845.2 Cucumis melo HOM05D001730 ORTHO05D004519 2.0e-10 69.7 44 77.3
CsaV3_3G041150 Cucumis sativus L. HOM05D001730 ORTHO05D004519 2.0e-10 69.7 44 77.3
arahy.Tifrunner.gnm1.ann1.I2BVW6 Arachis hypogaea HOM05D001730 ORTHO05D004519 2.7e-10 69.3 99 44.4
Aa31LG5G12510 Aethionema arabicum HOM05D001730 ORTHO05D004519 3.5e-10 68.9 43 72.1
Nn3g17310 Nelumbo nucifera HOM05D001730 ORTHO05D004519 3.5e-10 68.9 68 58.8
arahy.Tifrunner.gnm1.ann1.0JH0K6 Arachis hypogaea HOM05D001730 ORTHO05D004519 4.5e-10 68.6 99 43.4
Sc11g0007160 Simmondsia chinensis HOM05D001730 ORTHO05D004519 4.5e-10 68.6 45 71.1
THA.LOC104821018 Tarenaya hassleriana HOM05D001730 ORTHO05D004519 5.9e-10 68.2 67 53.7
ATR0752G123 Amborella trichopoda HOM05D001730 ORTHO05D004519 7.8e-10 67.8 60 61.7
Duzib147G0211 Durio zibethinus HOM05D001730 ORTHO05D004519 7.8e-10 67.8 40 77.5
CSS0028295 Camellia sinensis var. sinensis HOM05D001730 ORTHO05D004519 1.0e-09 67.4 80 43.8
CAN.G991.4 Capsicum annuum HOM05D001730 ORTHO05D115372 1.0e-09 67.4 66 54.5
Manes.02G132001 Manihot esculenta HOM05D001730 ORTHO05D023306 1.0e-09 67.4 72 54.2
Sed0026483 Sechium edule HOM05D001730 ORTHO05D004519 1.0e-09 67.4 64 62.5
AL3G11140 Arabidopsis lyrata HOM05D001730 ORTHO05D004519 1.3e-09 67.0 41 75.6
AT3G01120 Arabidopsis thaliana HOM05D001730 ORTHO05D004519 1.3e-09 67.0 45 68.9
Carub.0003s0105 Capsella rubella HOM05D001730 ORTHO05D004519 1.3e-09 67.0 41 75.6
CARHR075930 Cardamine hirsuta HOM05D001730 ORTHO05D004519 1.7e-09 66.6 51 64.7
Gohir.A07G206200 Gossypium hirsutum HOM05D001730 ORTHO05D004519 2.3e-09 66.2 64 59.4
A03p32700 Brassica napus HOM05D000321 ORTHO05D000204 2.9e-09 65.9 43 69.8
MBI05_g05246_MAGBIO Magnolia biondii HOM05D001730 ORTHO05D004519 2.9e-09 65.9 40 77.5
C03p39800 Brassica napus HOM05D000321 ORTHO05D002202 3.8e-09 65.5 51 66.7
BcaC05g30383 Brassica carinata HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
BcaC05g30493 Brassica carinata HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
A05p44840 Brassica napus HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
C09p75430 Brassica napus HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
BolC5t35117H Brassica oleracea HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
BraA05t23173Z Brassica rapa HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
Thhalv10020394m.g Eutrema salsugineum HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
Sp3g01000 Schrenkiella parvula HOM05D001730 ORTHO05D004519 5.0e-09 65.1 40 72.5
Thecc.06G096500 Theobroma cacao HOM05D001730 ORTHO05D023306 5.0e-09 65.1 78 52.6
BcaC01g04503 Brassica carinata HOM05D001730 ORTHO05D004519 6.6e-09 64.7 43 69.8
BolC3t16244H Brassica oleracea HOM05D001730 ORTHO05D002202 6.6e-09 64.7 43 69.8
Gohir.D07G212300 Gossypium hirsutum HOM05D001730 ORTHO05D004519 1.1e-08 63.9 40 77.5
QL02p084735 Quercus lobata HOM05D001730 ORTHO05D004519 1.9e-08 63.2 36 77.8
GSVIVG01011450001 Vitis vinifera HOM05D001730 ORTHO05D004519 1.9e-08 63.2 36 86.1
Gorai.001G240300 Gossypium raimondii HOM05D001730 ORTHO05D004519 3.3e-08 62.4 40 77.5
BraA03t12438Z Brassica rapa HOM05D001730 ORTHO05D004519 4.3e-08 62.0 43 65.1
Cc00_g29950 Coffea canephora HOM05D001730 ORTHO05D023306 4.3e-08 62.0 54 57.4
HPP92_018345 Vanilla planifolia HOM05D001730 ORTHO05D004519 5.6e-08 61.6 76 47.4
Medtr7g011230 Medicago truncatula HOM05D001730 ORTHO05D004519 7.3e-08 61.2 39 71.8
AagrBONN_evm.TU.Sc2ySwM_362.2686 Anthoceros agrestis HOM05D001730 ORTHO05D004519 4.7e-07 58.5 76 48.7
SMO351G0107 Selaginella moellendorffii HOM05D001730 ORTHO05D004519 3.0e-06 55.8 73 43.8
Pp3c20_1550 Physcomitrium patens HOM05D001730 ORTHO05D004519 5.2e-06 55.1 68 51.5


User provided reference genes

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