Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015868.1 Olea europaea HOM05D001007 ORTHO05D043453 5.7e-192 674.1 343 100.0
Oeu044532.1 Olea europaea HOM05D001007 ORTHO05D008005 3.2e-57 226.5 611 34.2
SalBow2G0827 Salvia bowleyana HOM05D001007 ORTHO05D008005 9.5e-46 188.3 627 30.5
Migut.L01377 Erythranthe guttata HOM05D001007 ORTHO05D008005 1.6e-45 187.6 579 31.1
Lsat_1_v5_gn_3_49280 Lactuca sativa HOM05D001007 ORTHO05D008005 4.0e-44 183.0 573 29.8
MSTRG.647 Avicennia marina HOM05D001007 ORTHO05D008005 1.7e-42 177.6 574 30.5
SalBow2G2106 Salvia bowleyana HOM05D001007 ORTHO05D008005 1.7e-42 177.6 657 29.1
Nitab4.5_0007178g0040 Nicotiana tabacum HOM05D001007 ORTHO05D008005 8.3e-42 175.3 594 30.3
Lj3A1046T50 Lonicera japonica HOM05D001007 ORTHO05D008005 1.4e-41 174.5 583 30.0
Nitab4.5_0001030g0130 Nicotiana tabacum HOM05D001007 ORTHO05D008005 3.2e-41 173.3 469 32.0
Sopen05g002480 Solanum pennellii HOM05D001007 ORTHO05D008005 1.2e-40 171.4 523 31.0
ECA246G0840 Erigeron canadensis HOM05D001007 ORTHO05D008005 3.5e-40 169.9 539 30.1
Solyc05g006530.4 Solanum lycopersicum HOM05D001007 ORTHO05D008005 3.5e-40 169.9 522 30.8
PGSC0003DMG400022635 Solanum tuberosum HOM05D001007 ORTHO05D008005 6.0e-40 169.1 572 30.8
SGA_v2.0_scaffold166G38318 Striga asiatica HOM05D001007 ORTHO05D008005 6.0e-40 169.1 545 30.6
GSVIVG01020137001 Vitis vinifera HOM05D001007 ORTHO05D008005 7.8e-40 168.7 503 30.4
TAR622G0260 Trochodendron aralioides HOM05D001007 ORTHO05D008005 1.3e-39 167.9 504 30.4
Nn4g22952 Nelumbo nucifera HOM05D001007 ORTHO05D008005 3.9e-39 166.4 532 29.7
Sc14g0008490 Simmondsia chinensis HOM05D001007 ORTHO05D008005 6.6e-39 165.6 633 29.1
QL03p067425 Quercus lobata HOM05D001007 ORTHO05D008005 1.1e-38 164.9 601 29.6
Lj2g0000675 Lotus japonicus HOM05D001007 ORTHO05D008005 3.3e-38 163.3 526 29.7
CSS0010380 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D008005 7.3e-38 162.2 195 45.1
CSS0012238 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D008005 7.3e-38 162.2 195 45.1
FAN22G1767 Fragaria x ananassa HOM05D001007 ORTHO05D008005 7.3e-38 162.2 611 28.5
Haze_12116 Corylus avellana HOM05D001007 ORTHO05D008005 1.2e-37 161.4 505 29.5
HanXRQChr15g0476051 Helianthus annuus HOM05D001007 ORTHO05D008005 2.1e-37 160.6 502 29.5
Cfa009084 Carpinus fangiana HOM05D001007 ORTHO05D008005 2.8e-37 160.2 587 28.4
Lalb_Chr05g0217331 Lupinus albus HOM05D001007 ORTHO05D008005 2.8e-37 160.2 501 29.7
Ca_26198_v3 Cicer arietinum L. HOM05D001007 ORTHO05D008005 3.6e-37 159.8 195 44.1
FAN12G3712 Fragaria x ananassa HOM05D001007 ORTHO05D008005 4.7e-37 159.5 586 28.5
Dinv24923 Davidia involucrata HOM05D001007 ORTHO05D008005 1.4e-36 157.9 195 44.1
FvH4_4g35290 Fragaria vesca HOM05D001007 ORTHO05D008005 1.4e-36 157.9 586 28.7
Medtr5g036660 Medicago truncatula HOM05D001007 ORTHO05D008005 1.4e-36 157.9 529 30.1
Peaxi162Scf00828g00118 Petunia axillaris HOM05D001007 ORTHO05D008005 1.4e-36 157.9 195 44.6
Rhsim12G0126700 Rhododendron simsii HOM05D001007 ORTHO05D008005 3.1e-36 156.8 195 45.6
COL.COLO4_36274 Corchorus olitorius HOM05D001007 ORTHO05D008005 4.0e-36 156.4 195 43.6
CAN.G549.5 Capsicum annuum HOM05D001007 ORTHO05D008005 6.8e-36 155.6 515 30.5
CiPaw.05G144400 Carya illinoinensis HOM05D001007 ORTHO05D008005 6.8e-36 155.6 607 28.0
Thecc.02G238700 Theobroma cacao HOM05D001007 ORTHO05D008005 6.8e-36 155.6 593 28.5
Ciclev10030551m.g Citrus clementina HOM05D001007 ORTHO05D008005 8.9e-36 155.2 195 42.1
FAN17G1611 Fragaria x ananassa HOM05D001007 ORTHO05D008005 1.2e-35 154.8 586 28.5
DCAR_007115 Daucus carota HOM05D001007 ORTHO05D008005 1.5e-35 154.5 600 28.8
unitig_22.g6484 Utricularia gibba HOM05D001007 ORTHO05D008005 2.0e-35 154.1 195 45.1
Prupe.1G262200 Prunus persica HOM05D001007 ORTHO05D008005 2.6e-35 153.7 597 28.3
TWI36G1227 Tripterygium wilfordii HOM05D001007 ORTHO05D008005 2.6e-35 153.7 195 43.1
Gohir.D05G322000 Gossypium hirsutum HOM05D001007 ORTHO05D008005 4.4e-35 152.9 195 43.1
TPR.G17327 Trifolium pratense HOM05D001007 ORTHO05D008005 4.4e-35 152.9 195 42.6
MELO3C002934.2 Cucumis melo HOM05D001007 ORTHO05D008005 5.8e-35 152.5 585 28.7
Gohir.A05G319700 Gossypium hirsutum HOM05D001007 ORTHO05D008005 5.8e-35 152.5 195 42.6
CANSAT01G1265 Cannabis sativa HOM05D001007 ORTHO05D008005 7.6e-35 152.1 611 28.3
Gorai.009G345500 Gossypium raimondii HOM05D001007 ORTHO05D008005 7.6e-35 152.1 195 43.1
arahy.Tifrunner.gnm1.ann1.CDW9W4 Arachis hypogaea HOM05D001007 ORTHO05D008005 1.3e-34 151.4 487 29.2
CDE11G0261 Ceratophyllum demersum HOM05D001007 ORTHO05D008005 1.3e-34 151.4 195 44.1
Cc11_g13990 Coffea canephora HOM05D001007 ORTHO05D008005 1.3e-34 151.4 572 27.8
PSO832G4178 Papaver somniferum HOM05D001007 ORTHO05D008005 1.3e-34 151.4 195 44.1
PSO591G0128 Papaver somniferum HOM05D001007 ORTHO05D008005 2.2e-34 150.6 195 44.1
Atru.chr11.1926 Acer truncatum HOM05D001007 ORTHO05D008005 2.9e-34 150.2 195 41.0
arahy.Tifrunner.gnm1.ann1.91JL5L Arachis hypogaea HOM05D001007 ORTHO05D008005 2.9e-34 150.2 499 28.3
RcHm_v2.0_Chr4g0444891 Rosa chinensis HOM05D001007 ORTHO05D008005 2.9e-34 150.2 598 27.9
Cpa.g.sc5.319 Carica papaya HOM05D001007 ORTHO05D008005 4.9e-34 149.4 195 41.5
VMungo1215G0407 Vigna mungo HOM05D001007 ORTHO05D008005 6.4e-34 149.1 501 29.5
CsaV3_5G025450 Cucumis sativus L. HOM05D001007 ORTHO05D008005 1.1e-33 148.3 584 28.1
Aqoxy3G03150 Aquilegia oxysepala HOM05D001007 ORTHO05D008005 3.2e-33 146.7 195 43.1
ClCG09G022160 Citrullus lanatus HOM05D001007 ORTHO05D008005 3.2e-33 146.7 611 27.7
Phvul.002G077700 Phaseolus vulgaris HOM05D001007 ORTHO05D008005 4.1e-33 146.4 502 28.9
Psat2g114320 Pisum sativum HOM05D001007 ORTHO05D008005 5.4e-33 146.0 608 27.3
MD16G1083800 Malus domestica HOM05D001007 ORTHO05D008005 9.2e-33 145.2 600 27.8
Duzib251G0457 Durio zibethinus HOM05D001007 ORTHO05D008005 1.2e-32 144.8 616 28.2
Eucgr.B03380 Eucalyptus grandis HOM05D001007 ORTHO05D008005 2.1e-32 144.1 195 42.6
FAN07G0147 Fragaria x ananassa HOM05D001007 ORTHO05D008005 3.5e-32 143.3 177 44.1
Sed0006819 Sechium edule HOM05D001007 ORTHO05D008005 3.5e-32 143.3 508 29.9
vmacro16298 Vaccinium macrocarpon HOM05D001007 ORTHO05D008005 7.8e-32 142.1 556 27.0
PGR102G1282 Punica granatum HOM05D001007 ORTHO05D008005 3.0e-31 140.2 597 28.5
Manes.05G093300 Manihot esculenta HOM05D001007 ORTHO05D008005 3.9e-31 139.8 195 40.5
Hund25300 Selenicereus undatus HOM05D001007 ORTHO05D008005 3.9e-31 139.8 192 42.2
HPP92_010802 Vanilla planifolia HOM05D001007 ORTHO05D008005 5.1e-31 139.4 533 28.1
ATR1101G016 Amborella trichopoda HOM05D001007 ORTHO05D008005 8.6e-31 138.7 195 40.0
Potri.010G038500 Populus trichocarpa HOM05D001007 ORTHO05D008005 8.6e-31 138.7 520 28.1
Sabra10G0027700 Salix brachista HOM05D001007 ORTHO05D008005 8.6e-31 138.7 508 28.1
Glyma.02G026751 Glycine max HOM05D001007 ORTHO05D008005 2.5e-30 137.1 194 39.7
Zm00001eb254030 Zea mays HOM05D001007 ORTHO05D008005 2.5e-30 137.1 502 28.5
Glyma.01G038100 Glycine max HOM05D001007 ORTHO05D008005 3.3e-30 136.7 603 26.7
EL10Ac6g13095 Beta vulgaris HOM05D001007 ORTHO05D008005 4.3e-30 136.3 192 39.6
Os02g0739000 Oryza sativa ssp. japonica HOM05D001007 ORTHO05D008005 5.6e-30 136.0 502 28.7
AUR62026525 Chenopodium quinoa HOM05D001007 ORTHO05D008005 9.6e-30 135.2 547 28.5
AUR62026327 Chenopodium quinoa HOM05D001007 ORTHO05D008005 1.2e-29 134.8 547 28.9
AT1G70070 Arabidopsis thaliana HOM05D001007 ORTHO05D008005 2.8e-29 133.7 502 27.3
BcaB03g14784 Brassica carinata HOM05D001007 ORTHO05D008005 1.1e-28 131.7 192 37.0
Aa31LG4G10810 Aethionema arabicum HOM05D001007 ORTHO05D008005 1.4e-28 131.3 549 26.8
BcaC08g46458 Brassica carinata HOM05D001007 ORTHO05D008005 1.8e-28 131.0 192 37.0
AL2G29320 Arabidopsis lyrata HOM05D001007 ORTHO05D008005 3.1e-28 130.2 540 26.3
BraA07t31219Z Brassica rapa HOM05D001007 ORTHO05D008005 4.0e-28 129.8 503 26.8
Carub.0002s1674 Capsella rubella HOM05D001007 ORTHO05D008005 5.2e-28 129.4 530 26.6
Thhalv10018027m.g Eutrema salsugineum HOM05D001007 ORTHO05D008005 5.2e-28 129.4 628 25.0
C06p43940 Brassica napus HOM05D001007 ORTHO05D008005 1.2e-27 128.3 503 26.8
A07p36480 Brassica napus HOM05D001007 ORTHO05D008005 3.4e-27 126.7 539 26.0
CARHR063170 Cardamine hirsuta HOM05D001007 ORTHO05D008005 5.8e-27 125.9 601 25.6
Sp5g25190 Schrenkiella parvula HOM05D001007 ORTHO05D008005 7.6e-27 125.6 604 25.2
BolC6t39466H Brassica oleracea HOM05D001007 ORTHO05D008005 3.8e-26 123.2 539 25.8
THA.LOC104822069 Tarenaya hassleriana HOM05D001007 ORTHO05D008005 3.8e-26 123.2 545 26.2
SEGI_21456 Sequoiadendron giganteum HOM05D001007 ORTHO05D008005 7.1e-25 119.0 196 36.2
Actinidia04054 Actinidia chinensis HOM05D001007 ORTHO05D008005 1.6e-24 117.9 130 48.5
Actinidia14986 Actinidia chinensis HOM05D001007 ORTHO05D008005 1.6e-24 117.9 443 29.8
AagrBONN_evm.TU.Sc2ySwM_228.3608 Anthoceros agrestis HOM05D001007 ORTHO05D008005 1.3e-23 114.8 195 33.8
Pp3c13_6210 Physcomitrium patens HOM05D001007 ORTHO05D008005 5.1e-23 112.8 195 32.8
SMO340G0093 Selaginella moellendorffii HOM05D001007 ORTHO05D008005 1.3e-21 108.2 189 34.4
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 8.1e-21 105.5 195 32.8
Pp3c4_20390 Physcomitrium patens HOM05D001007 ORTHO05D008005 4.9e-18 96.3 192 32.3
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.0e-15 88.6 192 29.2
CAN.G491.12 Capsicum annuum HOM05D001007 ORTHO05D043453 2.0e-11 74.3 56 60.7
MCO13G258 Micromonas commoda HOM05D001007 ORTHO05D008005 2.4e-09 67.4 194 27.3
Pp3c17_9310 Physcomitrium patens HOM05D001007 ORTHO05D008005 7.9e-08 62.4 220 28.6
FAN07G0397 Fragaria x ananassa HOM05D001007 ORTHO05D008005 1.9e-06 57.8 143 35.7
PRCOL_00000255 Prasinoderma coloniale HOM05D001007 ORTHO05D008005 9.6e-06 55.5 190 25.8


User provided reference genes

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