Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015728.1 Olea europaea HOM05D001701 ORTHO05D001628 4.2e-71 271.2 130 100.0
SGA_v2.0_scaffold152G36804 Striga asiatica HOM05D006776 ORTHO05D007603 4.2e-18 95.1 108 46.3
Dinv20029 Davidia involucrata HOM05D001701 ORTHO05D001628 7.1e-18 94.4 105 48.6
MSTRG.24375 Avicennia marina HOM05D001701 ORTHO05D001628 1.6e-17 93.2 110 48.2
Dinv17823 Davidia involucrata HOM05D001701 ORTHO05D001628 2.7e-17 92.4 105 48.6
Cc02_g11540 Coffea canephora HOM05D001701 ORTHO05D001628 1.0e-16 90.5 110 47.3
MSTRG.22220 Avicennia marina HOM05D001701 ORTHO05D001628 8.7e-16 87.4 108 45.4
Oeu033888.1 Olea europaea HOM05D001701 ORTHO05D001628 3.3e-15 85.5 108 42.6
Oeu002726.2 Olea europaea HOM05D001701 ORTHO05D001628 5.6e-15 84.7 108 39.8
SalBow2G0221 Salvia bowleyana HOM05D001701 ORTHO05D001628 7.3e-15 84.3 81 53.1
MELO3C004944.2 Cucumis melo HOM05D001701 ORTHO05D001628 1.6e-14 83.2 121 40.5
QL05p074614 Quercus lobata HOM05D001701 ORTHO05D001628 2.1e-14 82.8 112 40.2
QL93p0196_0020 Quercus lobata HOM05D001701 ORTHO05D001628 2.1e-14 82.8 112 40.2
PGSC0003DMG400029413 Solanum tuberosum HOM05D001701 ORTHO05D001628 4.8e-14 81.6 105 42.9
Cfa000259 Carpinus fangiana HOM05D001701 ORTHO05D001628 6.2e-14 81.3 107 40.2
vmacro03698 Vaccinium macrocarpon HOM05D001701 ORTHO05D001628 6.2e-14 81.3 89 49.4
Peaxi162Scf00064g00099 Petunia axillaris HOM05D001701 ORTHO05D001628 8.1e-14 80.9 114 39.5
CsaV3_1G013590 Cucumis sativus L. HOM05D001701 ORTHO05D001628 1.1e-13 80.5 111 41.4
Lj2A596G37 Lonicera japonica HOM05D001701 ORTHO05D001628 2.4e-13 79.3 109 40.4
Haze_06757 Corylus avellana HOM05D001701 ORTHO05D001628 4.0e-13 78.6 93 43.0
Haze_06765 Corylus avellana HOM05D001701 ORTHO05D001628 4.0e-13 78.6 93 43.0
Prupe.4G024700 Prunus persica HOM05D001701 ORTHO05D001628 5.3e-13 78.2 98 42.9
Migut.N02782 Erythranthe guttata HOM05D001701 ORTHO05D001628 9.0e-13 77.4 111 40.5
CAN.G208.5 Capsicum annuum HOM05D001701 ORTHO05D001628 1.2e-12 77.0 105 40.0
ClCG03G002810 Citrullus lanatus HOM05D001701 ORTHO05D001628 2.6e-12 75.9 121 38.8
Sed0013587 Sechium edule HOM05D001701 ORTHO05D001628 2.6e-12 75.9 104 40.4
Actinidia26939 Actinidia chinensis HOM05D001701 ORTHO05D001628 4.4e-12 75.1 91 44.0
Sopen12g031380 Solanum pennellii HOM05D001701 ORTHO05D001628 7.6e-12 74.3 105 39.0
GSVIVG01012646001 Vitis vinifera HOM05D001701 ORTHO05D001628 1.3e-11 73.6 108 39.8
Solyc12g094490.2 Solanum lycopersicum HOM05D001701 ORTHO05D001628 2.2e-11 72.8 105 39.0
Rhsim13G0156600 Rhododendron simsii HOM05D001701 ORTHO05D001628 2.9e-11 72.4 89 43.8
Hma1.2p1_0813F.1_g222550 Hydrangea macrophylla HOM05D001701 ORTHO05D001628 8.4e-11 70.9 96 42.7
Cpa.g.sc198.19 Carica papaya HOM05D001701 ORTHO05D001628 1.9e-10 69.7 80 47.5
Potri.004G020300 Populus trichocarpa HOM05D001701 ORTHO05D001628 1.9e-10 69.7 103 39.8
Manes.17G036600 Manihot esculenta HOM05D001701 ORTHO05D001628 3.2e-10 68.9 107 41.1
CSS0041158 Camellia sinensis var. sinensis HOM05D001701 ORTHO05D001628 4.2e-10 68.6 90 42.2
Nn1g07073 Nelumbo nucifera HOM05D001701 ORTHO05D001628 4.2e-10 68.6 97 40.2
Thecc.06G216100 Theobroma cacao HOM05D001701 ORTHO05D001628 4.2e-10 68.6 106 42.5
Atru.chr10.2164 Acer truncatum HOM05D001701 ORTHO05D001628 7.1e-10 67.8 94 41.5
Duzib235G1035 Durio zibethinus HOM05D001701 ORTHO05D001628 2.1e-09 66.2 108 40.7
Sabra04G0011200 Salix brachista HOM05D001701 ORTHO05D001628 2.1e-09 66.2 111 40.5
Duzib192G0636 Durio zibethinus HOM05D001701 ORTHO05D001628 4.6e-09 65.1 94 42.6
TAR624G1251 Trochodendron aralioides HOM05D001701 ORTHO05D001628 6.0e-09 64.7 58 55.2
CiPaw.10G069000 Carya illinoinensis HOM05D001701 ORTHO05D001628 7.8e-09 64.3 64 48.4
Ciclev10014158m.g Citrus clementina HOM05D001701 ORTHO05D001628 7.8e-09 64.3 91 39.6
Nn1g03599 Nelumbo nucifera HOM05D001701 ORTHO05D001628 7.8e-09 64.3 96 40.6
VMungo0720G1492 Vigna mungo HOM05D001701 ORTHO05D001628 7.8e-09 64.3 94 42.6
Duzib160G0395 Durio zibethinus HOM05D001701 ORTHO05D001628 1.0e-08 63.9 108 39.8
Gohir.A06G146700 Gossypium hirsutum HOM05D001701 ORTHO05D001628 1.3e-08 63.5 58 55.2
Gohir.D06G152500 Gossypium hirsutum HOM05D001701 ORTHO05D001628 1.3e-08 63.5 58 55.2
Gorai.010G178200 Gossypium raimondii HOM05D001701 ORTHO05D001628 1.3e-08 63.5 58 55.2
MD10G1315900 Malus domestica HOM05D001701 ORTHO05D001628 1.3e-08 63.5 107 35.5
DCAR_008129 Daucus carota HOM05D001701 ORTHO05D001628 1.7e-08 63.2 113 35.4
Potri.011G024800 Populus trichocarpa HOM05D001701 ORTHO05D001628 1.7e-08 63.2 103 38.8
MD05G1342300 Malus domestica HOM05D001701 ORTHO05D001628 2.3e-08 62.8 109 35.8
Phvul.007G053400 Phaseolus vulgaris HOM05D001701 ORTHO05D001628 2.3e-08 62.8 94 42.6
TAR626G1780 Trochodendron aralioides HOM05D001701 ORTHO05D001628 3.0e-08 62.4 44 61.4
CANSAT56G3099 Cannabis sativa HOM05D001701 ORTHO05D001628 3.9e-08 62.0 105 34.3
Sed0026699 Sechium edule HOM05D001701 ORTHO05D001628 3.9e-08 62.0 111 39.6
FAN25G1704 Fragaria x ananassa HOM05D001701 ORTHO05D001628 5.1e-08 61.6 106 30.2
CiPaw.09G088600 Carya illinoinensis HOM05D001701 ORTHO05D001628 8.7e-08 60.8 56 48.2
Lsat_1_v5_gn_7_17321 Lactuca sativa HOM05D001701 ORTHO05D001628 8.7e-08 60.8 57 45.6
Sabra11G0015500 Salix brachista HOM05D001701 ORTHO05D001628 8.7e-08 60.8 94 40.4
Sabra11G0021200 Salix brachista HOM05D001701 ORTHO05D001628 8.7e-08 60.8 94 40.4
RcHm_v2.0_Chr5g0003821 Rosa chinensis HOM05D001701 ORTHO05D001628 1.5e-07 60.1 108 29.6
TWI38G0154 Tripterygium wilfordii HOM05D001701 ORTHO05D001628 1.5e-07 60.1 61 47.5
FAN21G2529 Fragaria x ananassa HOM05D001701 ORTHO05D001628 1.9e-07 59.7 106 29.2
FvH4_3g02510 Fragaria vesca HOM05D001701 ORTHO05D001628 2.5e-07 59.3 93 31.2
PSO832G3539 Papaver somniferum HOM05D001701 ORTHO05D001628 2.5e-07 59.3 96 38.5
Medtr4g073340 Medicago truncatula HOM05D001701 ORTHO05D001628 5.6e-07 58.2 42 66.7
Aqoxy3G03046 Aquilegia oxysepala HOM05D001701 ORTHO05D001628 9.6e-07 57.4 44 61.4
Lalb_Chr02g0144641 Lupinus albus HOM05D001701 ORTHO05D001628 9.6e-07 57.4 94 41.5
Lalb_Chr06g0164831 Lupinus albus HOM05D001701 ORTHO05D001628 9.6e-07 57.4 107 39.3
Glyma.20G142500 Glycine max HOM05D001701 ORTHO05D001628 2.1e-06 56.2 94 42.6
HanXRQChr05g0129881 Helianthus annuus HOM05D001701 ORTHO05D001628 2.1e-06 56.2 108 37.0
Psat1g074640 Pisum sativum HOM05D001701 ORTHO05D001628 2.1e-06 56.2 42 64.3
Thhalv10028426m.g Eutrema salsugineum HOM05D001701 ORTHO05D001628 2.8e-06 55.8 56 55.4
AL6G48390 Arabidopsis lyrata HOM05D001701 ORTHO05D001628 3.6e-06 55.5 56 55.4
AUR62012664 Chenopodium quinoa HOM05D001701 ORTHO05D001628 3.6e-06 55.5 60 46.7
Glyma.10G251100 Glycine max HOM05D001701 ORTHO05D001628 3.6e-06 55.5 94 42.6
arahy.Tifrunner.gnm1.ann1.62P0D6 Arachis hypogaea HOM05D001701 ORTHO05D001628 4.8e-06 55.1 102 39.2
arahy.Tifrunner.gnm1.ann1.6E9CRB Arachis hypogaea HOM05D001701 ORTHO05D001628 4.8e-06 55.1 102 39.2
AT4G04885 Arabidopsis thaliana HOM05D001701 ORTHO05D001628 6.2e-06 54.7 56 55.4
CARHR252670 Cardamine hirsuta HOM05D001701 ORTHO05D001628 6.2e-06 54.7 56 53.6
Lj1g0009790 Lotus japonicus HOM05D001701 ORTHO05D001628 6.2e-06 54.7 94 39.4
THA.LOC104812944 Tarenaya hassleriana HOM05D001701 ORTHO05D001628 6.2e-06 54.7 57 49.1
TPR.G4288 Trifolium pratense HOM05D001701 ORTHO05D001628 6.2e-06 54.7 52 51.9
BcaC04g21335 Brassica carinata HOM05D001701 ORTHO05D001628 8.1e-06 54.3 61 50.8
A09p26040 Brassica napus HOM05D001701 ORTHO05D001628 8.1e-06 54.3 61 50.8
C09p33040 Brassica napus HOM05D001701 ORTHO05D001628 8.1e-06 54.3 61 50.8
BolC9t56139H Brassica oleracea HOM05D001701 ORTHO05D001628 8.1e-06 54.3 61 50.8
BraA09t38170Z Brassica rapa HOM05D001701 ORTHO05D001628 8.1e-06 54.3 61 50.8
AUR62021990 Chenopodium quinoa HOM05D001701 ORTHO05D001628 8.1e-06 54.3 60 46.7
MBI02_g15270_MAGBIO Magnolia biondii HOM05D001701 ORTHO05D001628 8.1e-06 54.3 91 38.5


User provided reference genes

Program Settings