Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 2.4e-164 582.0 284 100.0
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 1.3e-117 426.8 284 75.0
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 5.2e-114 414.8 284 72.5
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 4.8e-112 408.3 284 72.5
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 1.8e-111 406.4 284 71.8
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 9.1e-111 404.1 284 69.7
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.6e-110 403.3 284 68.0
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 3.5e-110 402.1 284 71.5
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 5.0e-109 398.3 284 69.7
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 5.0e-109 398.3 316 64.9
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 3.2e-108 395.6 284 69.4
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 3.2e-108 395.6 285 68.8
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 5.5e-108 394.8 282 68.8
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 9.4e-108 394.0 282 69.1
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 3.6e-107 392.1 285 69.1
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 4.7e-107 391.7 303 66.3
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 8.0e-107 391.0 284 68.0
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 1.4e-106 390.2 284 67.6
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 3.0e-106 389.0 284 68.0
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 5.2e-106 388.3 285 68.1
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 6.8e-106 387.9 285 67.0
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 6.8e-106 387.9 285 67.0
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 8.8e-106 387.5 283 67.8
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 8.8e-106 387.5 284 67.3
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.2e-105 387.1 284 66.5
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.5e-105 386.7 285 67.7
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.0e-105 386.3 285 67.4
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 3.4e-105 385.6 284 68.0
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 3.4e-105 385.6 285 66.7
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 3.4e-105 385.6 271 69.4
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 5.7e-105 384.8 283 67.8
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 7.5e-105 384.4 284 66.5
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 1.3e-104 383.6 282 67.7
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 1.3e-104 383.6 284 66.2
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.7e-104 383.3 284 65.1
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 4.9e-104 381.7 285 67.0
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.9e-104 381.7 284 65.5
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 4.9e-104 381.7 269 70.3
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 8.3e-104 380.9 282 66.7
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.4e-103 380.2 284 65.1
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 1.4e-103 380.2 282 65.6
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 1.8e-103 379.8 285 65.3
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.1e-103 379.0 283 66.4
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 4.1e-103 378.6 284 63.7
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 1.6e-102 376.7 285 67.4
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.6e-102 376.7 282 64.9
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 2.0e-102 376.3 282 66.3
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 2.0e-102 376.3 285 65.6
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 2.0e-102 376.3 298 63.4
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 2.7e-102 375.9 282 65.6
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 2.7e-102 375.9 285 64.6
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 3.5e-102 375.6 284 63.4
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 4.5e-102 375.2 282 65.2
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 7.7e-102 374.4 286 64.0
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 7.7e-102 374.4 285 65.3
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 1.0e-101 374.0 282 64.2
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.0e-101 374.0 282 65.2
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 1.0e-101 374.0 282 65.6
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 1.3e-101 373.6 285 64.6
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 3.8e-101 372.1 282 65.2
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 5.0e-101 371.7 284 62.7
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 6.6e-101 371.3 282 64.9
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 6.6e-101 371.3 284 64.4
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 1.1e-100 370.5 282 65.2
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 1.5e-100 370.2 285 65.6
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 3.3e-100 369.0 282 64.5
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 3.3e-100 369.0 282 64.2
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 3.3e-100 369.0 285 65.6
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 4.3e-100 368.6 282 64.5
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 4.3e-100 368.6 280 62.9
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 7.2e-100 367.9 281 64.1
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 7.2e-100 367.9 284 63.4
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 9.5e-100 367.5 282 64.2
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.2e-99 367.1 284 63.0
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 1.6e-99 366.7 285 64.9
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 2.8e-99 365.9 271 66.8
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 6.1e-99 364.8 284 62.3
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 6.1e-99 364.8 334 58.4
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 8.0e-99 364.4 285 62.5
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 2.3e-98 362.8 285 62.1
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 3.0e-98 362.5 285 63.2
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 3.0e-98 362.5 284 62.0
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 4.0e-98 362.1 270 67.4
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 4.0e-98 362.1 279 63.8
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 5.2e-98 361.7 285 64.6
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 3.4e-97 359.0 284 61.6
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.8e-95 353.2 285 62.1
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 7.8e-94 347.8 265 65.3
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 3.1e-90 335.9 255 65.5
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.4e-89 332.0 302 60.6
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 5.8e-89 331.6 285 60.4
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 4.9e-88 328.6 251 62.9
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 6.0e-86 321.6 282 56.7
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 3.1e-82 309.3 277 54.2
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 5.2e-82 308.5 287 53.0
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 8.9e-82 307.8 245 62.0
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.8e-81 305.1 284 56.7
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.3e-80 303.9 246 60.6
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 3.7e-80 302.4 284 55.6
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 6.4e-80 301.6 254 63.0
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 3.2e-79 299.3 246 59.8
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 1.1e-76 290.8 276 51.1
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 5.8e-73 278.5 321 46.7
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 9.9e-65 251.1 282 47.2
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 1.1e-63 247.7 274 46.4
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.4e-58 230.7 363 42.4
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.4e-58 229.9 254 49.6
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 3.2e-55 219.5 279 41.6
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 4.2e-55 219.2 270 43.0
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 9.6e-52 208.0 125 82.4
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 2.1e-51 206.8 148 68.2
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 8.7e-45 184.9 98 79.6
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 3.4e-41 172.9 87 85.1
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 1.6e-35 154.1 161 52.8
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.6e-35 154.1 96 75.0
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.0e-24 118.2 83 68.7
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.0e-24 118.2 83 68.7
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 1.4e-23 114.4 68 75.0
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.3e-21 107.1 75 69.3
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 5.9e-17 92.4 67 64.2
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 4.7e-14 82.8 51 72.5
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 2.3e-13 80.5 51 70.6
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 2.3e-13 80.5 51 70.6
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 2.8e-11 73.6 119 39.5
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 5.3e-10 69.3 73 43.8
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 5.3e-10 69.3 43 72.1
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 7.0e-10 68.9 43 67.4
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 6.5e-08 62.4 37 73.0
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 1.5e-07 61.2 38 65.8
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 2.5e-07 60.5 76 39.5
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 1.2e-06 58.2 76 40.8
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.7e-06 57.0 77 37.7
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 2.7e-06 57.0 70 40.0
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 3.6e-06 56.6 65 43.1
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 8.0e-06 55.5 77 39.0


User provided reference genes

Program Settings