Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013618.1 Olea europaea HOM05D003955 ORTHO05D004684 1.1e-93 346.7 176 100.0
Oeu061232.2 Olea europaea HOM05D003955 ORTHO05D004684 1.0e-35 154.1 105 79.0
MSTRG.9290 Avicennia marina HOM05D003955 ORTHO05D004684 2.4e-32 142.9 105 69.5
Cc04_g06580 Coffea canephora HOM05D003955 ORTHO05D004684 8.9e-32 141.0 104 71.2
Migut.D01456 Erythranthe guttata HOM05D003955 ORTHO05D004684 2.0e-31 139.8 105 68.6
Hma1.2p1_0669F.1_g200270 Hydrangea macrophylla HOM05D003955 ORTHO05D004684 3.4e-31 139.0 132 57.6
Lj2A556T29 Lonicera japonica HOM05D003955 ORTHO05D004684 4.4e-31 138.7 105 65.7
Lj6A27G8 Lonicera japonica HOM05D003955 ORTHO05D004684 4.4e-31 138.7 105 67.6
MD14G1234400 Malus domestica HOM05D003955 ORTHO05D004684 5.8e-31 138.3 105 68.6
GSVIVG01008399001 Vitis vinifera HOM05D003955 ORTHO05D004684 9.9e-31 137.5 105 65.7
Phvul.002G327600 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 1.7e-30 136.7 105 65.7
Prupe.5G230600 Prunus persica HOM05D003955 ORTHO05D004684 2.2e-30 136.3 102 69.6
QL10p027883 Quercus lobata HOM05D003955 ORTHO05D004684 6.4e-30 134.8 105 66.7
Glyma.05G243900 Glycine max HOM05D003955 ORTHO05D004684 8.4e-30 134.4 105 63.8
PGR083G2578 Punica granatum HOM05D003955 ORTHO05D004684 8.4e-30 134.4 102 68.6
Glyma.08G051900 Glycine max HOM05D003955 ORTHO05D004684 1.1e-29 134.0 105 62.9
MD06G1229500 Malus domestica HOM05D003955 ORTHO05D004684 1.1e-29 134.0 105 63.8
Actinidia18907 Actinidia chinensis HOM05D003955 ORTHO05D004684 1.4e-29 133.7 105 68.6
Haze_18797 Corylus avellana HOM05D003955 ORTHO05D004684 1.4e-29 133.7 104 67.3
VMungo0251G3447 Vigna mungo HOM05D003955 ORTHO05D004684 1.4e-29 133.7 132 56.1
PGSC0003DMG400005655 Solanum tuberosum HOM05D003955 ORTHO05D004684 3.2e-29 132.5 105 65.7
ClCG06G014440 Citrullus lanatus HOM05D003955 ORTHO05D004684 4.1e-29 132.1 105 62.9
Manes.06G008300 Manihot esculenta HOM05D003955 ORTHO05D004684 4.1e-29 132.1 132 55.3
Nn4g24112 Nelumbo nucifera HOM05D003955 ORTHO05D004684 4.1e-29 132.1 110 65.5
DCAR_014770 Daucus carota HOM05D003955 ORTHO05D004684 5.4e-29 131.7 105 64.8
ECA234G1883 Erigeron canadensis HOM05D003955 ORTHO05D004684 5.4e-29 131.7 105 64.8
Atru.chr9.1765 Acer truncatum HOM05D003955 ORTHO05D004684 7.1e-29 131.3 105 64.8
Cfa019689 Carpinus fangiana HOM05D003955 ORTHO05D004684 7.1e-29 131.3 105 65.7
Rhsim12G0139700 Rhododendron simsii HOM05D003955 ORTHO05D004684 7.1e-29 131.3 105 66.7
Sopen03g037980 Solanum pennellii HOM05D003955 ORTHO05D004684 7.1e-29 131.3 105 65.7
CSS0005322 Camellia sinensis var. sinensis HOM05D003955 ORTHO05D004684 1.2e-28 130.6 105 62.9
CiPaw.15G139700 Carya illinoinensis HOM05D003955 ORTHO05D004684 1.2e-28 130.6 105 62.9
MELO3C017347.2 Cucumis melo HOM05D003955 ORTHO05D004684 1.2e-28 130.6 105 62.9
TWI81G0555 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 1.2e-28 130.6 105 61.9
vmacro16423 Vaccinium macrocarpon HOM05D003955 ORTHO05D004684 1.2e-28 130.6 105 65.7
Solyc03g119090.3 Solanum lycopersicum HOM05D003955 ORTHO05D004684 1.6e-28 130.2 105 64.8
TAR374G0009 Trochodendron aralioides HOM05D003955 ORTHO05D004684 1.6e-28 130.2 102 66.7
Sed0001638 Sechium edule HOM05D003955 ORTHO05D004684 2.1e-28 129.8 105 63.8
arahy.Tifrunner.gnm1.ann1.I5E1T8 Arachis hypogaea HOM05D003955 ORTHO05D004684 2.7e-28 129.4 102 62.7
CsaV3_1G004220 Cucumis sativus L. HOM05D003955 ORTHO05D004684 2.7e-28 129.4 105 61.9
Peaxi162Scf00683g00157 Petunia axillaris HOM05D003955 ORTHO05D004684 2.7e-28 129.4 104 64.4
Potri.012G049200 Populus trichocarpa HOM05D003955 ORTHO05D004684 2.7e-28 129.4 132 53.8
HanXRQChr10g0314661 Helianthus annuus HOM05D003955 ORTHO05D004684 3.5e-28 129.0 105 63.8
Lalb_Chr05g0221841 Lupinus albus HOM05D003955 ORTHO05D004684 3.5e-28 129.0 105 61.9
Medtr1g107560 Medicago truncatula HOM05D003955 ORTHO05D004684 3.5e-28 129.0 102 63.7
Atru.chr11.420 Acer truncatum HOM05D003955 ORTHO05D004684 4.6e-28 128.6 132 56.8
Oeu031790.1 Olea europaea HOM05D003955 ORTHO05D004684 4.6e-28 128.6 80 83.8
Gohir.A11G004000 Gossypium hirsutum HOM05D003955 ORTHO05D004684 6.0e-28 128.3 104 64.4
Lsat_1_v5_gn_5_91461 Lactuca sativa HOM05D003955 ORTHO05D004684 6.0e-28 128.3 105 64.8
COL.COLO4_22318 Corchorus olitorius HOM05D003955 ORTHO05D004684 7.8e-28 127.9 102 62.7
arahy.Tifrunner.gnm1.ann1.MW1RK6 Arachis hypogaea HOM05D003955 ORTHO05D004684 1.0e-27 127.5 102 61.8
TWI15G0606 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 1.0e-27 127.5 105 61.9
Nitab4.5_0001158g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 1.3e-27 127.1 105 63.8
Sed0014282 Sechium edule HOM05D003955 ORTHO05D004684 1.3e-27 127.1 132 53.0
SGA_v2.0_scaffold25G10972 Striga asiatica HOM05D003955 ORTHO05D004684 1.3e-27 127.1 104 63.5
DCAR_023230 Daucus carota HOM05D003955 ORTHO05D004684 1.7e-27 126.7 104 61.5
Nitab4.5_0001644g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 1.7e-27 126.7 105 63.8
Ciclev10007782m.g Citrus clementina HOM05D003955 ORTHO05D004684 2.3e-27 126.3 106 64.2
PSO782G1387 Papaver somniferum HOM05D003955 ORTHO05D004684 2.3e-27 126.3 105 63.8
RcHm_v2.0_Chr7g0178701 Rosa chinensis HOM05D003955 ORTHO05D004684 2.3e-27 126.3 104 62.5
Sabra15G0055900 Salix brachista HOM05D003955 ORTHO05D004684 2.3e-27 126.3 105 60.0
FAN04G3226 Fragaria x ananassa HOM05D003955 ORTHO05D004684 3.0e-27 125.9 104 62.5
FAN08G2535 Fragaria x ananassa HOM05D003955 ORTHO05D004684 3.0e-27 125.9 104 62.5
FAN13G1787 Fragaria x ananassa HOM05D003955 ORTHO05D004684 3.0e-27 125.9 104 62.5
Lj4g0027787 Lotus japonicus HOM05D003955 ORTHO05D004684 3.0e-27 125.9 132 53.0
Sabra15G0063600 Salix brachista HOM05D003955 ORTHO05D004684 3.0e-27 125.9 104 60.6
Thecc.03G050300 Theobroma cacao HOM05D003955 ORTHO05D004684 3.0e-27 125.9 105 60.0
CANSAT80G2537 Cannabis sativa HOM05D003955 ORTHO05D004684 3.9e-27 125.6 105 60.0
Thhalv10020321m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 3.9e-27 125.6 104 64.4
Lj5g0018825 Lotus japonicus HOM05D003955 ORTHO05D004684 3.9e-27 125.6 102 59.8
Potri.015G041200 Populus trichocarpa HOM05D003955 ORTHO05D004684 3.9e-27 125.6 132 50.8
Sp3g16180 Schrenkiella parvula HOM05D003955 ORTHO05D004684 3.9e-27 125.6 104 63.5
Eucgr.K02263 Eucalyptus grandis HOM05D003955 ORTHO05D004684 5.1e-27 125.2 105 61.9
Aa31LG8G4920 Aethionema arabicum HOM05D003955 ORTHO05D004684 6.6e-27 124.8 104 62.5
Gorai.007G004500 Gossypium raimondii HOM05D003955 ORTHO05D004684 6.6e-27 124.8 104 63.5
PSO063G1948 Papaver somniferum HOM05D003955 ORTHO05D004684 6.6e-27 124.8 105 62.9
Cpa.g.sc3.440 Carica papaya HOM05D003955 ORTHO05D004684 8.7e-27 124.4 132 53.8
Gohir.D11G003500 Gossypium hirsutum HOM05D003955 ORTHO05D004684 8.7e-27 124.4 104 63.5
Sabra12G0034600 Salix brachista HOM05D003955 ORTHO05D004684 8.7e-27 124.4 105 59.0
Dinv05158 Davidia involucrata HOM05D003955 ORTHO05D004684 1.1e-26 124.0 102 62.7
TPR.G12969 Trifolium pratense HOM05D003955 ORTHO05D004684 1.1e-26 124.0 104 59.6
EL10Ac6g14239 Beta vulgaris HOM05D003955 ORTHO05D004684 1.5e-26 123.6 102 61.8
Carub.0003s1778 Capsella rubella HOM05D003955 ORTHO05D004684 1.5e-26 123.6 104 63.5
CARHR093380 Cardamine hirsuta HOM05D003955 ORTHO05D004684 1.5e-26 123.6 104 62.5
Thecc.02G279800 Theobroma cacao HOM05D003955 ORTHO05D004684 1.5e-26 123.6 102 64.7
AT3G18060 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 1.9e-26 123.2 104 61.5
THA.LOC104820357 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 1.9e-26 123.2 149 48.3
Lalb_Chr06g0165551 Lupinus albus HOM05D003955 ORTHO05D004684 2.5e-26 122.9 102 59.8
Psat6g220280 Pisum sativum HOM05D003955 ORTHO05D004684 2.5e-26 122.9 102 59.8
TPR.G13862 Trifolium pratense HOM05D003955 ORTHO05D004684 2.5e-26 122.9 102 59.8
TAR622G0688 Trochodendron aralioides HOM05D003955 ORTHO05D004684 2.5e-26 122.9 105 61.9
Ah.03g138590 Amaranthus hybridus HOM05D003955 ORTHO05D004684 5.6e-26 121.7 102 60.8
Phvul.007G038100 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 5.6e-26 121.7 105 58.1
AUR62041238 Chenopodium quinoa HOM05D003955 ORTHO05D004684 7.3e-26 121.3 102 60.8
Medtr8g106820 Medicago truncatula HOM05D003955 ORTHO05D004684 7.3e-26 121.3 105 59.0
AUR62014196 Chenopodium quinoa HOM05D003955 ORTHO05D004684 9.6e-26 120.9 102 59.8
COL.COLO4_20464 Corchorus olitorius HOM05D003955 ORTHO05D004684 9.6e-26 120.9 102 64.7
FAN18G0775 Fragaria x ananassa HOM05D003955 ORTHO05D004684 9.6e-26 120.9 131 52.7
Glyma.20G126400 Glycine max HOM05D003955 ORTHO05D004684 9.6e-26 120.9 105 55.2
Gohir.D01G099700 Gossypium hirsutum HOM05D003955 ORTHO05D004684 9.6e-26 120.9 102 63.7
Gorai.002G180400 Gossypium raimondii HOM05D003955 ORTHO05D004684 9.6e-26 120.9 102 63.7
A05p31710 Brassica napus HOM05D003955 ORTHO05D004684 1.6e-25 120.2 149 49.0
BolC5t33552H Brassica oleracea HOM05D003955 ORTHO05D004684 1.6e-25 120.2 149 49.0
BraA05t22004Z Brassica rapa HOM05D003955 ORTHO05D004684 1.6e-25 120.2 149 49.0
Psat7g000120 Pisum sativum HOM05D003955 ORTHO05D004684 1.6e-25 120.2 105 58.1
AL3G31220 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 2.1e-25 119.8 104 59.6
Ca_17215_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 2.1e-25 119.8 105 58.1
Ca_17217_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 2.1e-25 119.8 105 58.1
Ciclev10014635m.g Citrus clementina HOM05D003955 ORTHO05D004684 4.7e-25 118.6 102 60.8
FvH4_5g17110 Fragaria vesca HOM05D003955 ORTHO05D004684 8.1e-25 117.9 131 51.1
Hund20686 Selenicereus undatus HOM05D003955 ORTHO05D004684 8.1e-25 117.9 102 56.9
Gohir.A01G153300 Gossypium hirsutum HOM05D003955 ORTHO05D004684 1.1e-24 117.5 102 61.8
VMungo0720G1874 Vigna mungo HOM05D003955 ORTHO05D004684 1.1e-24 117.5 105 56.2
Hund24990 Selenicereus undatus HOM05D003955 ORTHO05D004684 2.4e-24 116.3 105 57.1
Manes.15G126700 Manihot esculenta HOM05D003955 ORTHO05D004684 3.1e-24 115.9 102 62.7
ATR0686G116 Amborella trichopoda HOM05D003955 ORTHO05D004684 4.0e-24 115.5 102 58.8
C05p48110 Brassica napus HOM05D003955 ORTHO05D004684 4.0e-24 115.5 149 47.7
Aqoxy3G04013 Aquilegia oxysepala HOM05D003955 ORTHO05D004684 2.6e-23 112.8 105 57.1
SEGI_26510 Sequoiadendron giganteum HOM05D003955 ORTHO05D004684 1.7e-22 110.2 102 52.0
Sc11g0004100 Simmondsia chinensis HOM05D003955 ORTHO05D004684 2.2e-22 109.8 102 52.9
Aa31LG2G8590 Aethionema arabicum HOM05D003955 ORTHO05D004684 8.4e-22 107.8 106 59.4
AT2G01330 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 1.4e-21 107.1 104 56.7
CARHR143850 Cardamine hirsuta HOM05D003955 ORTHO05D004684 1.4e-21 107.1 107 57.0
AL5G10290 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 3.2e-21 105.9 104 55.8
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 4.2e-21 105.5 105 56.2
Cpa.g.sc211.2 Carica papaya HOM05D003955 ORTHO05D004684 5.4e-21 105.1 102 55.9
Zm00001eb125700 Zea mays HOM05D003955 ORTHO05D004684 5.4e-21 105.1 132 43.2
BcaB07g30749 Brassica carinata HOM05D003955 ORTHO05D004684 7.1e-21 104.8 107 56.1
Zm00001eb334960 Zea mays HOM05D003955 ORTHO05D004684 7.1e-21 104.8 132 43.2
Thhalv10000821m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.6e-20 103.6 107 56.1
Carub.0005s0030 Capsella rubella HOM05D003955 ORTHO05D004684 2.1e-20 103.2 104 54.8
BcaC04g21593 Brassica carinata HOM05D003955 ORTHO05D004684 2.7e-20 102.8 107 53.3
A09p23310 Brassica napus HOM05D003955 ORTHO05D004684 2.7e-20 102.8 107 53.3
C09p30050 Brassica napus HOM05D003955 ORTHO05D004684 2.7e-20 102.8 107 53.3
BolC9t55869H Brassica oleracea HOM05D003955 ORTHO05D004684 2.7e-20 102.8 107 53.3
BraA09t37932Z Brassica rapa HOM05D003955 ORTHO05D004684 2.7e-20 102.8 107 53.3
THA.LOC104823875 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 2.7e-20 102.8 107 57.0
Os01g0125800 Oryza sativa ssp. japonica HOM05D003955 ORTHO05D004684 3.5e-20 102.4 105 48.6
CDE04G0774 Ceratophyllum demersum HOM05D003955 ORTHO05D004684 7.8e-20 101.3 105 53.3
Sp2g12780 Schrenkiella parvula HOM05D003955 ORTHO05D004684 1.3e-19 100.5 107 54.2
Dinv26502 Davidia involucrata HOM05D003955 ORTHO05D004684 2.1e-17 93.2 105 52.4
Pp3c3_9960 Physcomitrium patens HOM05D003955 ORTHO05D004684 1.9e-13 80.1 104 38.5
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 1.2e-12 77.4 119 38.7
AagrBONN_evm.TU.Sc2ySwM_340.157 Anthoceros agrestis HOM05D003955 ORTHO05D004684 3.3e-10 69.3 102 34.3
SMO298G0047 Selaginella moellendorffii HOM05D003955 ORTHO05D004684 1.2e-07 60.8 103 36.9


User provided reference genes

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