Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013500.1 Olea europaea HOM05D005978 ORTHO05D007472 0.0e+00 1559.7 804 100.0
MSTRG.14837 Avicennia marina HOM05D005978 ORTHO05D007472 4.9e-226 788.5 584 68.5
Dinv30321 Davidia involucrata HOM05D005978 ORTHO05D007472 4.1e-225 785.4 592 67.9
SalBow7G3859 Salvia bowleyana HOM05D005978 ORTHO05D007472 9.2e-225 784.3 580 69.7
Migut.M00377 Erythranthe guttata HOM05D005978 ORTHO05D007472 1.2e-221 773.9 584 68.3
Cc10_g00090 Coffea canephora HOM05D005978 ORTHO05D007472 2.0e-203 713.4 576 62.2
QL02p016300 Quercus lobata HOM05D005978 ORTHO05D007472 1.3e-202 710.7 577 61.4
CiPaw.08G079000 Carya illinoinensis HOM05D005978 ORTHO05D007472 6.4e-202 708.4 582 62.0
Actinidia15540 Actinidia chinensis HOM05D005978 ORTHO05D007472 8.4e-202 708.0 581 62.8
TAR376G0648 Trochodendron aralioides HOM05D005978 ORTHO05D007472 8.4e-202 708.0 577 63.1
Manes.18G000350 Manihot esculenta HOM05D005978 ORTHO05D007472 8.7e-199 698.0 586 59.2
MD06G1000600 Malus domestica HOM05D005978 ORTHO05D007472 5.6e-198 695.3 588 60.5
Thecc.08G097500 Theobroma cacao HOM05D005978 ORTHO05D007472 6.2e-197 691.8 678 54.7
Lsat_1_v5_gn_9_48081 Lactuca sativa HOM05D005978 ORTHO05D007472 8.1e-197 691.4 602 60.1
CAN.G1330.32 Capsicum annuum HOM05D005978 ORTHO05D007472 1.4e-196 690.6 582 59.5
TWI36G1144 Tripterygium wilfordii HOM05D005978 ORTHO05D007472 1.2e-195 687.6 580 59.8
Prupe.5G001100 Prunus persica HOM05D005978 ORTHO05D007472 5.8e-195 685.3 577 61.4
Rhsim06G0000600 Rhododendron simsii HOM05D005978 ORTHO05D007472 8.4e-194 681.4 682 55.1
Sopen04g036610 Solanum pennellii HOM05D005978 ORTHO05D007472 1.9e-193 680.2 586 58.4
Gohir.D05G180700 Gossypium hirsutum HOM05D005978 ORTHO05D007472 7.1e-193 678.3 577 61.0
HanXRQChr16g0512201 Helianthus annuus HOM05D005978 ORTHO05D007472 1.2e-192 677.6 682 56.0
Gorai.009G185700 Gossypium raimondii HOM05D005978 ORTHO05D007472 1.6e-192 677.2 577 61.0
Atru.chr13.20 Acer truncatum HOM05D005978 ORTHO05D007472 2.7e-192 676.4 580 59.7
Gohir.A05G177300 Gossypium hirsutum HOM05D005978 ORTHO05D007472 3.5e-192 676.0 577 60.8
Potri.002G001700 Populus trichocarpa HOM05D005978 ORTHO05D007472 2.5e-190 669.8 592 56.9
ECA232G2674 Erigeron canadensis HOM05D005978 ORTHO05D007472 1.3e-189 667.5 599 57.4
CANSAT64G0954 Cannabis sativa HOM05D005978 ORTHO05D007472 2.1e-189 666.8 587 59.3
Nitab4.5_0003364g0020 Nicotiana tabacum HOM05D005978 ORTHO05D007472 3.6e-189 666.0 594 57.1
Duzib041G0071 Durio zibethinus HOM05D005978 ORTHO05D007472 8.1e-189 664.8 576 58.9
GSVIVG01013460001 Vitis vinifera HOM05D005978 ORTHO05D007472 3.1e-188 662.9 581 59.4
Nn6g31553 Nelumbo nucifera HOM05D005978 ORTHO05D007472 9.0e-188 661.4 677 52.4
Ciclev10003766m.g Citrus clementina HOM05D005978 ORTHO05D007472 1.1e-185 654.4 588 57.8
COL.COLO4_12265 Corchorus olitorius HOM05D005978 ORTHO05D007472 5.4e-185 652.1 668 53.3
Glyma.01G245200 Glycine max HOM05D005978 ORTHO05D007472 1.6e-184 650.6 579 57.0
Cpa.g.sc36.98 Carica papaya HOM05D005978 ORTHO05D007472 4.3e-182 642.5 592 57.3
Sabra02G0001200 Salix brachista HOM05D005978 ORTHO05D007472 9.6e-182 641.3 632 52.7
RcHm_v2.0_Chr7g0217581 Rosa chinensis HOM05D005978 ORTHO05D007472 2.1e-181 640.2 580 57.8
Lalb_Chr16g0376221 Lupinus albus HOM05D005978 ORTHO05D007472 4.0e-180 636.0 585 54.4
SGA_v2.0_scaffold34G13893 Striga asiatica HOM05D005978 ORTHO05D007472 7.6e-179 631.7 581 58.3
Phvul.002G054600 Phaseolus vulgaris HOM05D005978 ORTHO05D007472 6.5e-178 628.6 585 54.4
FvH4_5g26690 Fragaria vesca HOM05D005978 ORTHO05D007472 2.5e-177 626.7 580 56.4
TPR.G21607 Trifolium pratense HOM05D005978 ORTHO05D007472 4.2e-177 625.9 581 55.1
FAN18G0791 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.2e-176 624.4 580 56.2
Medtr5g004660 Medicago truncatula HOM05D005978 ORTHO05D007472 1.2e-176 624.4 580 54.7
Psat4g213520 Pisum sativum HOM05D005978 ORTHO05D007472 3.5e-176 622.9 581 54.9
Haze_22888 Corylus avellana HOM05D005978 ORTHO05D007472 7.9e-176 621.7 542 59.8
Aa31LG4G6720 Aethionema arabicum HOM05D005978 ORTHO05D007472 1.0e-175 621.3 686 49.7
ClCG11G019200 Citrullus lanatus HOM05D005978 ORTHO05D007472 1.3e-175 620.9 595 53.4
Sp5g31790 Schrenkiella parvula HOM05D005978 ORTHO05D007472 1.3e-175 620.9 580 54.3
FAN04G0649 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.1e-174 617.8 580 56.0
AL2G36770 Arabidopsis lyrata HOM05D005978 ORTHO05D007472 5.7e-174 615.5 591 53.6
Carub.0002s2353 Capsella rubella HOM05D005978 ORTHO05D007472 1.6e-173 614.0 591 53.6
FAN13G0154 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.6e-173 614.0 580 55.7
THA.LOC104812025 Tarenaya hassleriana HOM05D005978 ORTHO05D007472 6.2e-173 612.1 586 54.4
AT1G76630 Arabidopsis thaliana HOM05D005978 ORTHO05D007472 1.1e-172 611.3 591 53.3
BcaC08g47175 Brassica carinata HOM05D005978 ORTHO05D007472 1.1e-172 611.3 581 54.2
Sc26g0004780 Simmondsia chinensis HOM05D005978 ORTHO05D007472 5.3e-172 609.0 578 53.8
PSO541G4404 Papaver somniferum HOM05D005978 ORTHO05D007472 6.9e-172 608.6 577 54.6
MELO3C017073.2 Cucumis melo HOM05D005978 ORTHO05D007472 1.2e-171 607.8 595 53.1
Eucgr.F03624 Eucalyptus grandis HOM05D005978 ORTHO05D007472 1.5e-171 607.4 580 54.5
CARHR070190 Cardamine hirsuta HOM05D005978 ORTHO05D007472 2.0e-171 607.1 577 53.4
arahy.Tifrunner.gnm1.ann1.BP04P6 Arachis hypogaea HOM05D005978 ORTHO05D007472 3.4e-171 606.3 582 52.7
Thhalv10018029m.g Eutrema salsugineum HOM05D005978 ORTHO05D007472 3.4e-171 606.3 580 53.6
BraA07t31758Z Brassica rapa HOM05D005978 ORTHO05D007472 7.6e-171 605.1 578 53.8
PSO675G6081 Papaver somniferum HOM05D005978 ORTHO05D007472 1.0e-170 604.7 577 54.4
CsaV3_4G037800 Cucumis sativus L. HOM05D005978 ORTHO05D007472 1.7e-170 604.0 595 53.3
PGR031G1913 Punica granatum HOM05D005978 ORTHO05D007472 1.9e-169 600.5 576 53.8
A07p42300 Brassica napus HOM05D005978 ORTHO05D007472 5.5e-169 599.0 578 53.3
Sed0020914 Sechium edule HOM05D005978 ORTHO05D007472 5.5e-169 599.0 574 53.7
Lj1g0010496 Lotus japonicus HOM05D005978 ORTHO05D007472 2.1e-168 597.0 581 53.2
C06p50880 Brassica napus HOM05D005978 ORTHO05D007472 3.9e-167 592.8 580 52.8
BcaC08g47227 Brassica carinata HOM05D005978 ORTHO05D007472 5.7e-166 589.0 576 53.1
BolC6t40113H Brassica oleracea HOM05D005978 ORTHO05D007472 1.3e-165 587.8 579 52.8
MBI04_g23900_MAGBIO Magnolia biondii HOM05D005978 ORTHO05D007472 9.0e-164 581.6 599 51.4
Aqoxy1G03258 Aquilegia oxysepala HOM05D005978 ORTHO05D007472 2.9e-162 576.6 577 52.7
Dinv04443 Davidia involucrata HOM05D005978 ORTHO05D007472 3.2e-161 573.2 466 62.0
arahy.Tifrunner.gnm1.ann1.U7IYJM Arachis hypogaea HOM05D005978 ORTHO05D007472 7.2e-161 572.0 582 51.2
Hund05194 Selenicereus undatus HOM05D005978 ORTHO05D007472 1.8e-159 567.4 574 50.7
AUR62042533 Chenopodium quinoa HOM05D005978 ORTHO05D007472 2.0e-155 553.9 578 50.7
EL10Ac1g01856 Beta vulgaris HOM05D005978 ORTHO05D007472 2.9e-154 550.1 578 51.4
FAN08G2840 Fragaria x ananassa HOM05D005978 ORTHO05D007472 2.4e-148 530.4 508 55.3
Peaxi162Scf00385g01220 Petunia axillaris HOM05D005978 ORTHO05D007472 4.5e-147 526.2 589 49.6
vmacro21736 Vaccinium macrocarpon HOM05D005978 ORTHO05D007472 2.2e-138 497.3 393 63.4
unitig_899.g15248 Utricularia gibba HOM05D005978 ORTHO05D007472 4.7e-136 489.6 515 52.8
Ca_24335_v3 Cicer arietinum L. HOM05D005978 ORTHO05D007472 1.2e-134 485.0 456 53.3
SEGI_31935 Sequoiadendron giganteum HOM05D005978 ORTHO05D007472 7.2e-129 465.7 593 42.7
Solyc04g082980.2 Solanum lycopersicum HOM05D005978 ORTHO05D007472 2.1e-128 464.2 528 47.9
HPP92_007456 Vanilla planifolia HOM05D005978 ORTHO05D007472 1.5e-126 458.0 580 43.1
AUR62035192 Chenopodium quinoa HOM05D005978 ORTHO05D007472 1.3e-125 454.9 567 45.0
Os10g0548200 Oryza sativa ssp. japonica HOM05D005978 ORTHO05D007472 1.2e-123 448.4 594 41.4
Zm00001eb022830 Zea mays HOM05D005978 ORTHO05D007472 1.6e-112 411.4 585 39.1
ATR0605G322 Amborella trichopoda HOM05D005978 ORTHO05D007472 7.5e-110 402.5 521 44.9
Ah.11g042540 Amaranthus hybridus HOM05D005978 ORTHO05D007472 7.6e-94 349.4 416 45.0
DCAR_022963 Daucus carota HOM05D005978 ORTHO05D007472 4.6e-75 287.0 254 59.1
CDE04G3357 Ceratophyllum demersum HOM05D005978 ORTHO05D007472 4.8e-56 223.8 309 39.8
Mapoly0002s0268 Marchantia polymorpha HOM05D005978 ORTHO05D007472 1.7e-53 215.3 683 27.1
CSS0007221 Camellia sinensis var. sinensis HOM05D005978 ORTHO05D007472 7.9e-51 206.5 178 65.2
arahy.Tifrunner.gnm1.ann1.G030KM Arachis hypogaea HOM05D005978 ORTHO05D007472 8.2e-40 169.9 200 48.5
Pp3c9_11110 Physcomitrium patens HOM05D005978 ORTHO05D007472 1.4e-39 169.1 583 26.9
Ah.11g042550 Amaranthus hybridus HOM05D005978 ORTHO05D007472 1.1e-36 159.5 156 55.1
CSS0044033 Camellia sinensis var. sinensis HOM05D005978 ORTHO05D007472 7.2e-36 156.8 121 66.9
SMO236G0050 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 2.0e-22 112.1 452 26.5
CBR_g3864 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-22 110.9 641 25.4
CDE04G2732 Ceratophyllum demersum HOM05D005978 ORTHO05D007472 2.5e-12 78.6 164 32.3
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 2.7e-11 75.1 59 62.7
TAR628G1490 Trochodendron aralioides HOM05D005978 ORTHO05D007472 4.7e-11 74.3 57 63.2


User provided reference genes

Program Settings