Gene: Sabra02G0001200

General Information

Structural Information

  • Species Salix brachista
  • Gene Identifier Sabra02G0001200
  • Transcript Identifier Sabra02G0001200.1
  • Gene Type Coding gene
  • Location GWHAAZH00000002 : 104518-121899 : negative

Gene Family Information

  • ID HOM05D005978
  • #Genes/#Species 131/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sabra02G0001200.1
  • Accession GWHGAAZH001999
  • Accession GWHTAAZH001999

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006401
IEA
InterProRNA catabolic process
GO:1904278
ISO
PLAZA Integrative Orthologypositive regulation of wax biosynthetic process AT1G76630
GO:0070478
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay AT1G76630
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT1G76630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0035615
IEA
InterProclathrin adaptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030121
IEA
InterProAP-1 adaptor complex
GO:0055087
IEA
InterProSki complex
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G76630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022775 AP complex, mu/sigma subunit
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR011012 Longin-like domain superfamily
IPR044733 AP-1 complex subunit sigma
IPR039226 Ski3/TTC37
IPR025757 Ternary complex factor MIP1, leucine-zipper
IPR006869 Domain of unknown function DUF547
Mapman id Description
16.4.1.2.6.2 RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.component SKI3
22.3.1.2.4 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.small subunit sigma (AP1S)