Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011104.1 Olea europaea HOM05D001849 ORTHO05D004075 1.7e-68 263.1 197 100.0
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 8.4e-39 164.5 205 67.8
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 8.4e-39 164.5 205 67.8
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 7.9e-37 157.9 200 69.5
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 1.0e-36 157.5 209 68.9
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.3e-36 157.1 206 67.5
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 1.8e-36 156.8 199 65.3
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 3.9e-36 155.6 198 51.0
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 1.1e-35 154.1 201 62.7
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 1.5e-35 153.7 198 54.5
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 1.9e-35 153.3 201 62.2
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 7.4e-35 151.4 219 58.4
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 9.7e-35 151.0 217 67.3
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 2.2e-34 149.8 207 59.4
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 2.2e-34 149.8 198 61.1
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 3.7e-34 149.1 207 64.7
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 3.7e-34 149.1 209 68.9
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 3.7e-34 149.1 210 62.9
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 4.8e-34 148.7 216 65.3
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 4.8e-34 148.7 220 65.9
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 6.3e-34 148.3 199 60.8
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 6.3e-34 148.3 223 61.9
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.1e-33 147.5 217 65.0
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.8e-33 146.7 206 68.0
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 4.1e-33 145.6 220 63.6
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 5.3e-33 145.2 200 60.5
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 5.3e-33 145.2 207 57.5
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 5.3e-33 145.2 201 62.7
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 9.0e-33 144.4 216 54.6
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 9.0e-33 144.4 201 65.2
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 1.2e-32 144.1 212 66.5
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 1.2e-32 144.1 203 56.7
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.5e-32 143.7 216 63.9
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 2.6e-32 142.9 200 55.5
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 3.4e-32 142.5 210 67.1
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 4.5e-32 142.1 208 61.1
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 7.7e-32 141.4 202 60.9
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 7.7e-32 141.4 220 58.6
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 7.7e-32 141.4 208 63.0
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.0e-31 141.0 232 59.1
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 1.7e-31 140.2 218 64.2
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 5.0e-31 138.7 211 56.4
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 1.4e-30 137.1 197 58.4
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 2.5e-30 136.3 196 60.2
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 4.2e-30 135.6 202 66.3
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 7.2e-30 134.8 202 54.0
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 7.2e-30 134.8 209 61.2
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 1.2e-29 134.0 219 59.4
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 1.6e-29 133.7 195 62.1
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 7.9e-29 131.3 251 57.0
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 7.9e-29 131.3 257 52.5
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 1.0e-28 131.0 196 57.1
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 2.3e-28 129.8 202 53.0
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 3.0e-28 129.4 200 67.5
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 3.9e-28 129.0 206 57.8
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 5.1e-28 128.6 211 62.1
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 6.7e-28 128.3 221 66.5
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.1e-27 127.5 202 55.0
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 1.1e-27 127.5 201 58.2
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 1.1e-27 127.5 197 53.3
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 2.0e-27 126.7 224 58.0
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 4.3e-27 125.6 204 66.2
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 5.7e-27 125.2 196 57.7
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 9.7e-27 124.4 201 63.7
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 9.7e-27 124.4 200 59.0
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 3.7e-26 122.5 199 61.3
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 6.3e-26 121.7 226 58.4
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 8.2e-26 121.3 237 55.7
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 1.1e-25 120.9 212 53.3
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 1.4e-25 120.6 199 63.8
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 2.4e-25 119.8 229 59.0
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 3.1e-25 119.4 227 56.8
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 5.3e-25 118.6 225 57.3
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 5.3e-25 118.6 225 57.3
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 4.5e-24 115.5 218 60.6
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 4.5e-24 115.5 191 63.9
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 5.0e-23 112.1 236 55.9
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 6.5e-23 111.7 142 62.0
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 1.1e-22 110.9 195 47.2
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 1.4e-22 110.5 228 55.3
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 1.9e-22 110.2 240 56.2
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 1.9e-22 110.2 219 50.2
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 5.5e-22 108.6 204 58.8
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 1.6e-21 107.1 266 48.5
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 2.1e-21 106.7 228 53.1
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 3.6e-21 105.9 214 50.5
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 6.1e-21 105.1 253 53.8
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 1.8e-20 103.6 270 43.7
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 1.8e-20 103.6 270 43.7
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 1.1e-19 100.9 104 55.8
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 4.4e-19 99.0 112 61.6
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 7.4e-19 98.2 233 46.4
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.7e-18 95.9 104 53.8
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 2.4e-17 93.2 233 53.6
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 3.1e-17 92.8 197 37.1
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 2.0e-16 90.1 240 42.9
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 7.7e-16 88.2 236 55.5
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 5.0e-15 85.5 223 48.9
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 8.5e-15 84.7 58 72.4
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 4.2e-14 82.4 66 65.2
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 2.1e-13 80.1 195 54.9
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 3.0e-12 76.3 225 42.2
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 6.7e-12 75.1 258 41.5
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 2.4e-09 66.6 65 60.0
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.2e-08 64.3 54 63.0
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 1.0e-07 61.2 218 50.5
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 1.7e-07 60.5 59 54.2
MBI19_g29884_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 2.9e-07 59.7 65 52.3
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 5.0e-07 58.9 193 53.9
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 3.2e-06 56.2 169 30.8
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 4.2e-06 55.8 202 36.1


User provided reference genes

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