Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010603.1 Olea europaea HOM05D001082 ORTHO05D005120 0.0e+00 2167.5 1073 100.0
Oeu010602.3 Olea europaea HOM05D001082 ORTHO05D005120 0.0e+00 1231.9 805 80.2
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 1.6e-192 677.6 1040 41.0
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 9.8e-190 668.3 1039 41.6
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 8.9e-175 618.6 1023 40.0
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 1.2e-174 618.2 1051 40.8
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 9.9e-174 615.1 1043 40.7
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 6.6e-170 602.4 1024 39.2
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 1.1e-167 595.1 1045 39.6
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 4.4e-166 589.7 1038 36.9
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 1.1e-159 568.5 1023 37.9
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 1.8e-159 567.8 1035 37.7
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 1.2e-158 565.1 1033 38.3
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 1.1e-156 558.5 993 38.9
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 2.1e-155 554.3 1035 37.9
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 8.7e-154 548.9 1013 38.5
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 3.4e-150 537.0 1031 36.2
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 6.0e-147 526.2 1032 36.5
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 8.4e-141 505.8 1040 34.9
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 4.2e-140 503.4 1072 35.0
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 1.6e-139 501.5 1038 33.5
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 1.0e-138 498.8 1026 33.5
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 5.1e-138 496.5 1070 34.4
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 1.6e-136 491.5 1038 33.4
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 3.7e-136 490.3 1031 33.2
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 4.5e-134 483.4 1047 35.0
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 1.3e-133 481.9 1032 34.9
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 6.5e-133 479.6 1023 33.1
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 1.0e-130 472.2 1067 33.6
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 3.0e-130 470.7 1023 32.8
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.9e-129 468.0 1032 32.6
Solyc01g102540.3 Solanum lycopersicum HOM05D001082 ORTHO05D005120 2.2e-128 464.5 428 58.6
Hma1.2p1_0052F.1_g030150 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 6.3e-128 463.0 372 64.0
CAN.G1379.30 Capsicum annuum HOM05D001082 ORTHO05D005120 8.2e-128 462.6 417 59.2
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 1.1e-127 462.2 1042 33.6
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 2.4e-127 461.1 1026 33.1
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 1.2e-126 458.8 1034 32.6
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 1.5e-126 458.4 1046 32.2
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 5.9e-126 456.4 1045 31.7
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 2.9e-125 454.1 1080 32.8
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 1.1e-124 452.2 1053 32.7
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 2.5e-124 451.1 1018 33.5
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 9.3e-124 449.1 1039 34.1
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 1.2e-123 448.7 1034 32.8
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 6.1e-123 446.4 1040 33.8
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 3.9e-122 443.7 1027 30.7
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 7.4e-121 439.5 1068 31.5
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 7.4e-121 439.5 1026 32.6
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 1.3e-120 438.7 1033 32.3
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 3.1e-119 434.1 380 60.0
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 5.3e-119 433.3 1029 31.8
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 3.4e-118 430.6 1101 31.5
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 5.9e-118 429.9 1033 31.4
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.0e-117 429.1 1077 31.5
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 1.0e-117 429.1 1074 31.7
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 5.0e-117 426.8 1036 30.8
ECA233G1393 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.1e-116 425.6 1075 30.2
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 4.2e-116 423.7 1037 30.4
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 1.2e-115 422.2 383 59.0
Haze_11087 Corylus avellana HOM05D001082 ORTHO05D005120 3.6e-115 420.6 358 59.2
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 6.1e-115 419.9 1036 30.9
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.0e-114 419.1 1115 29.9
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 1.4e-114 418.7 380 56.3
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 2.3e-114 417.9 383 58.7
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 3.0e-114 417.5 384 58.6
Hma1.2p1_0052F.1_g030160 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 6.7e-114 416.4 321 62.3
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 2.0e-113 414.8 1083 31.3
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 4.4e-113 413.7 383 57.7
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 5.7e-113 413.3 1040 31.9
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 5.7e-113 413.3 1040 31.9
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 5.7e-113 413.3 370 57.3
Gohir.A11G274000 Gossypium hirsutum HOM05D001082 ORTHO05D005120 2.2e-112 411.4 383 58.0
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 3.7e-112 410.6 383 57.7
Eucgr.G00034 Eucalyptus grandis HOM05D001082 ORTHO05D005120 6.5e-109 399.8 358 57.5
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 4.2e-108 397.1 1061 30.3
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 2.7e-107 394.4 1079 30.9
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 2.6e-102 377.9 1025 30.7
MD05G1161100 Malus domestica HOM05D001082 ORTHO05D005120 2.6e-102 377.9 352 55.4
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 1.3e-101 375.6 1036 30.1
Atru.chr12.2421 Acer truncatum HOM05D001082 ORTHO05D005120 3.3e-97 360.9 319 55.5
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 9.7e-97 359.4 1084 28.2
SHI21156 Sapria himalayana HOM05D001082 ORTHO05D005120 7.7e-94 349.7 351 51.3
ClCG06G008360 Citrullus lanatus HOM05D001082 ORTHO05D005120 4.7e-91 340.5 366 50.0
MD05G1162400 Malus domestica HOM05D001082 ORTHO05D005120 6.1e-91 340.1 352 52.3
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 3.0e-90 337.8 1039 29.1
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 8.8e-90 336.3 394 48.7
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 6.3e-88 330.1 394 48.0
Cpa.g.sc21.218 Carica papaya HOM05D001082 ORTHO05D005120 1.1e-87 329.3 302 56.6
Carub.0001s3160 Capsella rubella HOM05D001082 ORTHO05D005120 3.1e-87 327.8 373 49.3
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 9.1e-87 326.2 397 47.6
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 1.2e-86 325.9 373 48.5
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 1.2e-86 325.9 369 49.9
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 1.2e-86 325.9 388 48.2
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 2.0e-86 325.1 367 47.4
ClCG06G008350 Citrullus lanatus HOM05D001082 ORTHO05D005120 1.7e-85 322.0 319 49.5
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 3.8e-85 320.9 1035 26.9
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 8.6e-85 319.7 364 47.8
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 2.5e-84 318.2 357 48.5
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 5.5e-84 317.0 358 48.0
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 2.0e-81 308.5 393 44.3
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 1.3e-80 305.8 387 44.4
SEGI_00916 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 4.7e-75 287.3 1024 26.8
Cpa.g.sc21.217 Carica papaya HOM05D001082 ORTHO05D005120 3.7e-72 277.7 322 50.0
SEGI_15028 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 9.8e-65 253.1 325 41.5
Pp3c11_26590 Physcomitrium patens HOM05D001082 ORTHO05D005120 4.9e-64 250.8 359 41.2
Mapoly0008s0081 Marchantia polymorpha HOM05D001082 ORTHO05D005120 7.0e-63 246.9 360 39.2
CDE01G0790 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 2.7e-62 245.0 328 41.5
SEGI_12765 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 6.8e-58 230.3 295 44.7
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 4.4e-57 227.6 227 50.7
BcaC02g08190 Brassica carinata HOM05D001082 ORTHO05D005120 2.9e-56 224.9 299 42.8
C04p57470 Brassica napus HOM05D001082 ORTHO05D005120 6.4e-56 223.8 300 42.3
SMO239G0052 Selaginella moellendorffii HOM05D001082 ORTHO05D005120 1.4e-55 222.6 360 38.3
BolC4t27268H Brassica oleracea HOM05D001082 ORTHO05D005120 1.9e-55 222.2 294 42.9
BcaC02g08126 Brassica carinata HOM05D001082 ORTHO05D005120 4.1e-55 221.1 311 41.2
Hma1.2p1_0052F.1_g030140 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 1.3e-53 216.1 189 57.1
unitig_22.g5790 Utricularia gibba HOM05D001082 ORTHO05D005120 3.9e-53 214.5 566 33.2
Solyc01g102550.4 Solanum lycopersicum HOM05D001082 ORTHO05D005120 3.3e-52 211.5 370 38.6
ECA233G2822 Erigeron canadensis HOM05D001082 ORTHO05D005120 6.8e-50 203.8 160 65.0
VMungo0720G1958 Vigna mungo HOM05D001082 ORTHO05D005120 7.6e-49 200.3 374 36.4
Atru.chr6.17 Acer truncatum HOM05D001082 ORTHO05D005120 9.2e-47 193.4 151 66.2
CAN.G1379.29 Capsicum annuum HOM05D001082 ORTHO05D005120 2.7e-46 191.8 257 42.8
VMungo0720G0635 Vigna mungo HOM05D001082 ORTHO05D000001 3.5e-46 191.4 152 62.5
ClCG06G008340 Citrullus lanatus HOM05D001082 ORTHO05D005120 1.7e-45 189.1 408 33.3
Atru.chr12.2422 Acer truncatum HOM05D001082 ORTHO05D005120 1.6e-43 182.6 173 58.4
TAR339G0004 Trochodendron aralioides HOM05D001082 ORTHO05D005120 1.6e-43 182.6 228 45.2
unitig_22.g5791 Utricularia gibba HOM05D001082 ORTHO05D005120 2.8e-43 181.8 138 63.8
Cpa.g.sc21.222 Carica papaya HOM05D001082 ORTHO05D005120 2.4e-42 178.7 368 34.2
MD10G1160000 Malus domestica HOM05D001082 ORTHO05D005120 6.9e-42 177.2 193 46.6
MD08G1158700 Malus domestica HOM05D001082 ORTHO05D005120 5.8e-41 174.1 282 36.9
VMungo0720G0600 Vigna mungo HOM05D001082 ORTHO05D010195 1.7e-40 172.6 181 51.4
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis HOM05D001082 ORTHO05D005120 2.4e-39 168.7 316 34.8
MD05G1063300 Malus domestica HOM05D001082 ORTHO05D005120 4.2e-39 167.9 182 47.8
CDE01G0761 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 2.1e-38 165.6 371 31.3
Psat4g135880 Pisum sativum HOM05D001082 ORTHO05D005120 1.0e-37 163.3 186 47.8
VMungo0720G2272 Vigna mungo HOM05D001082 ORTHO05D005120 2.1e-35 155.6 126 55.6
SHI21155 Sapria himalayana HOM05D001082 ORTHO05D005120 2.8e-35 155.2 194 44.8
CBR_g55211 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-33 147.5 370 29.5
MD05G1161300 Malus domestica HOM05D001082 ORTHO05D005120 3.2e-31 141.7 340 33.2
BolC4t27335H Brassica oleracea HOM05D001082 ORTHO05D005120 5.4e-31 141.0 173 45.7
VMungo0720G0348 Vigna mungo HOM05D001082 ORTHO05D005120 3.9e-29 134.8 149 47.7
Lsat_1_v5_gn_8_801 Lactuca sativa HOM05D000349 ORTHO05D005120 5.6e-28 131.0 94 72.3
C04p58080 Brassica napus HOM05D001082 ORTHO05D005120 2.1e-27 129.0 567 24.7
SEGI_20053 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 1.4e-18 99.8 324 29.3
MD07G1280900 Malus domestica HOM05D001082 ORTHO05D005120 2.0e-17 95.9 98 51.0
Oeu026043.2 Olea europaea HOM05D000094 ORTHO05D002063 5.8e-17 94.4 60 81.7
MD00G1034800 Malus domestica HOM05D001082 ORTHO05D005120 1.0e-16 93.6 98 50.0
MBI12_g24277_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 2.4e-10 72.4 93 45.2
MCO16G497 Micromonas commoda HOM05D001082 ORTHO05D005120 2.9e-08 65.5 134 32.1
Oeu018795.1 Olea europaea HOM05D000113 ORTHO05D010194 5.0e-08 64.7 80 50.0
Oeu062027.1 Olea europaea HOM05D000113 ORTHO05D010194 1.1e-07 63.5 70 54.3
Oeu024441.1 Olea europaea HOM05D000113 ORTHO05D010194 1.4e-07 63.2 70 55.7
Oeu025572.1 Olea europaea HOM05D000113 ORTHO05D010194 3.2e-07 62.0 54 61.1
Oeu043378.1 Olea europaea HOM05D000113 ORTHO05D010194 3.2e-07 62.0 74 51.4
HPP92_015361 Vanilla planifolia HOM05D001082 ORTHO05D005120 1.2e-06 60.1 45 66.7
Oeu007744.1 Olea europaea HOM05D000113 ORTHO05D010194 2.7e-06 58.9 54 57.4
MD08G1158600 Malus domestica HOM05D001082 ORTHO05D005120 6.1e-06 57.8 32 81.2
Oeu025945.2 Olea europaea HOM05D005180 ORTHO05D006136 7.9e-06 57.4 66 48.5
Oeu049156.1 Olea europaea HOM05D000113 ORTHO05D008562 7.9e-06 57.4 92 39.1


User provided reference genes

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