Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010543.1 Olea europaea HOM05D000723 ORTHO05D290866 1.7e-60 235.7 112 100.0
Ah.01g017520 Amaranthus hybridus HOM05D000723 ORTHO05D001760 2.3e-09 65.9 185 27.6
Medtr2g009270 Medicago truncatula HOM05D000723 ORTHO05D001760 6.8e-09 64.3 42 69.0
TPR.G9490 Trifolium pratense HOM05D000723 ORTHO05D001760 8.8e-09 63.9 42 69.0
Aa31LG1G17600 Aethionema arabicum HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
AT5G64300 Arabidopsis thaliana HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
BcaB04g19966 Brassica carinata HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
A06p30980 Brassica napus HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
A09p08620 Brassica napus HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
C09p09730 Brassica napus HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
BolC9t53884H Brassica oleracea HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
BraA06t26040Z Brassica rapa HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
BraA09t36511Z Brassica rapa HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
Carub.0008s2509 Capsella rubella HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
CARHR278230 Cardamine hirsuta HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
Sp2g27360 Schrenkiella parvula HOM05D000723 ORTHO05D001760 1.2e-08 63.5 42 69.0
DCAR_029193 Daucus carota HOM05D000723 ORTHO05D001760 1.5e-08 63.2 42 66.7
vmacro19947 Vaccinium macrocarpon HOM05D000723 ORTHO05D001760 1.5e-08 63.2 42 66.7
Thhalv10003958m.g Eutrema salsugineum HOM05D000723 ORTHO05D001760 2.0e-08 62.8 42 66.7
Phvul.006G204200 Phaseolus vulgaris HOM05D000723 ORTHO05D001760 2.0e-08 62.8 42 66.7
AL8G41660 Arabidopsis lyrata HOM05D000723 ORTHO05D001760 2.6e-08 62.4 42 66.7
C03p61980 Brassica napus HOM05D000723 ORTHO05D001760 2.6e-08 62.4 42 66.7
BolC3t18457H Brassica oleracea HOM05D000723 ORTHO05D001760 2.6e-08 62.4 42 66.7
Rhsim05G0103300 Rhododendron simsii HOM05D000723 ORTHO05D001760 2.6e-08 62.4 34 73.5
THA.LOC104818446 Tarenaya hassleriana HOM05D000723 ORTHO05D001760 2.6e-08 62.4 42 66.7
CSS0009365 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 64.3
CSS0014798 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 64.3
AUR62010165 Chenopodium quinoa HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 66.7
AUR62013165 Chenopodium quinoa HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 66.7
COL.COLO4_32319 Corchorus olitorius HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 64.3
DCAR_001770 Daucus carota HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 64.3
Glyma.08G177300 Glycine max HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 64.3
Potri.001G310500 Populus trichocarpa HOM05D000723 ORTHO05D001760 3.4e-08 62.0 34 73.5
SGA_v2.0_scaffold219G42576 Striga asiatica HOM05D000723 ORTHO05D001760 3.4e-08 62.0 42 66.7
Lj5A234T85 Lonicera japonica HOM05D000723 ORTHO05D001760 4.4e-08 61.6 34 73.5
Sabra16G0196200 Salix brachista HOM05D000723 ORTHO05D001760 4.4e-08 61.6 34 73.5
Sc08g0003680 Simmondsia chinensis HOM05D000723 ORTHO05D001760 4.4e-08 61.6 42 64.3
VMungo0540G1860 Vigna mungo HOM05D000723 ORTHO05D001760 4.4e-08 61.6 42 64.3
Ciclev10028107m.g Citrus clementina HOM05D000723 ORTHO05D001760 5.7e-08 61.2 42 64.3
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 5.7e-08 61.2 42 66.7
Migut.N01084 Erythranthe guttata HOM05D000723 ORTHO05D001760 5.7e-08 61.2 39 64.1
Manes.07G035400 Manihot esculenta HOM05D000723 ORTHO05D001760 5.7e-08 61.2 42 64.3
DCAR_021879 Daucus carota HOM05D000723 ORTHO05D001760 7.5e-08 60.8 42 64.3
Psat1g215720 Pisum sativum HOM05D000723 ORTHO05D001760 7.5e-08 60.8 42 66.7
Cfa005680 Carpinus fangiana HOM05D000723 ORTHO05D001760 9.8e-08 60.5 42 61.9
Duzib132G1097 Durio zibethinus HOM05D000723 ORTHO05D001760 9.8e-08 60.5 42 61.9
Sabra17G0037100 Salix brachista HOM05D000723 ORTHO05D001760 9.8e-08 60.5 34 73.5
Thecc.02G133600 Theobroma cacao HOM05D000723 ORTHO05D001760 9.8e-08 60.5 42 61.9
Actinidia28040 Actinidia chinensis HOM05D000723 ORTHO05D001760 1.3e-07 60.1 42 61.9
Cpa.g.sc42.25 Carica papaya HOM05D000723 ORTHO05D001760 1.3e-07 60.1 42 64.3
Cc02_g21160 Coffea canephora HOM05D000723 ORTHO05D001760 1.3e-07 60.1 42 64.3
Oeu007986.1 Olea europaea HOM05D000723 ORTHO05D001760 1.3e-07 60.1 42 64.3
MSTRG.16602 Avicennia marina HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 64.3
CSS0019141 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 64.3
CANSAT11G2651 Cannabis sativa HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 64.3
CiPaw.05G032500 Carya illinoinensis HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 61.9
CiPaw.06G155800 Carya illinoinensis HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 61.9
Migut.B00579 Erythranthe guttata HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 64.3
Lj6g0004108 Lotus japonicus HOM05D000723 ORTHO05D001760 1.7e-07 59.7 42 59.5
Sabra17G0042400 Salix brachista HOM05D000723 ORTHO05D001760 1.7e-07 59.7 34 73.5
Atru.chr6.1216 Acer truncatum HOM05D000723 ORTHO05D001760 2.2e-07 59.3 34 67.6
Ca_00148_v3 Cicer arietinum L. HOM05D000723 ORTHO05D001760 2.2e-07 59.3 34 67.6
Haze_10570 Corylus avellana HOM05D000723 ORTHO05D001760 2.2e-07 59.3 42 59.5
Nitab4.5_0000863g0060 Nicotiana tabacum HOM05D000723 ORTHO05D001760 2.2e-07 59.3 42 61.9
Hund00076 Selenicereus undatus HOM05D000723 ORTHO05D001760 2.2e-07 59.3 42 61.9
SGA_v2.0_scaffold14G07140 Striga asiatica HOM05D000723 ORTHO05D001760 2.2e-07 59.3 42 64.3
TAR628G1235 Trochodendron aralioides HOM05D000723 ORTHO05D001760 2.2e-07 59.3 42 64.3
Dinv09004 Davidia involucrata HOM05D000723 ORTHO05D001760 2.8e-07 58.9 42 66.7
Potri.017G050400 Populus trichocarpa HOM05D000723 ORTHO05D001760 2.8e-07 58.9 34 70.6
RcHm_v2.0_Chr2g0112291 Rosa chinensis HOM05D000723 ORTHO05D001760 2.8e-07 58.9 42 61.9
SalBow8G1326 Salvia bowleyana HOM05D000723 ORTHO05D001760 2.8e-07 58.9 42 61.9
EL10Ac9g21522 Beta vulgaris HOM05D000723 ORTHO05D001760 3.7e-07 58.5 42 59.5
CAN.G3185.1 Capsicum annuum HOM05D000723 ORTHO05D001760 3.7e-07 58.5 42 59.5
CAN.G523.39 Capsicum annuum HOM05D000723 ORTHO05D001760 3.7e-07 58.5 42 59.5
HanXRQChr10g0303601 Helianthus annuus HOM05D000723 ORTHO05D001760 3.7e-07 58.5 39 61.5
Hma1.2p1_0784F.1_g217200 Hydrangea macrophylla HOM05D000723 ORTHO05D001760 3.7e-07 58.5 42 64.3
MD01G1036500 Malus domestica HOM05D000723 ORTHO05D001760 3.7e-07 58.5 42 61.9
GSVIVG01015676001 Vitis vinifera HOM05D000723 ORTHO05D001760 3.7e-07 58.5 42 59.5
CiPaw.03G146100 Carya illinoinensis HOM05D000723 ORTHO05D001760 4.8e-07 58.2 42 59.5
Haze_24823 Corylus avellana HOM05D000723 ORTHO05D001760 4.8e-07 58.2 42 61.9
Glyma.15G055700 Glycine max HOM05D000723 ORTHO05D001760 4.8e-07 58.2 42 59.5
HanXRQChr16g0514351 Helianthus annuus HOM05D000723 ORTHO05D001760 4.8e-07 58.2 34 67.6
Nitab4.5_0003959g0030 Nicotiana tabacum HOM05D000723 ORTHO05D001760 4.8e-07 58.2 42 59.5
PSO447G0200 Papaver somniferum HOM05D000723 ORTHO05D001760 4.8e-07 58.2 39 61.5
QL11p023181 Quercus lobata HOM05D000723 ORTHO05D001760 4.8e-07 58.2 42 59.5
PGR102G0129 Punica granatum HOM05D000723 ORTHO05D001760 6.3e-07 57.8 42 61.9
Solyc01g105560.3 Solanum lycopersicum HOM05D000723 ORTHO05D001760 6.3e-07 57.8 34 67.6
Sopen01g048020 Solanum pennellii HOM05D000723 ORTHO05D001760 6.3e-07 57.8 34 67.6
PGSC0003DMG400012571 Solanum tuberosum HOM05D000723 ORTHO05D001760 6.3e-07 57.8 34 67.6
TAR376G0486 Trochodendron aralioides HOM05D000723 ORTHO05D001760 6.3e-07 57.8 42 61.9
Dinv08865 Davidia involucrata HOM05D000723 ORTHO05D001760 8.3e-07 57.4 42 59.5
ECA234G3830 Erigeron canadensis HOM05D000723 ORTHO05D001760 8.3e-07 57.4 34 67.6
Lsat_1_v5_gn_5_108740 Lactuca sativa HOM05D000723 ORTHO05D001760 8.3e-07 57.4 34 67.6
Nn1g05464 Nelumbo nucifera HOM05D000723 ORTHO05D001760 8.3e-07 57.4 42 61.9
PGR042G2777 Punica granatum HOM05D000723 ORTHO05D001760 8.3e-07 57.4 42 57.1
Actinidia01861 Actinidia chinensis HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
arahy.Tifrunner.gnm1.ann1.J66FTP Arachis hypogaea HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
arahy.Tifrunner.gnm1.ann1.W47UXZ Arachis hypogaea HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
Gohir.A03G175500 Gossypium hirsutum HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
Gohir.D02G199200 Gossypium hirsutum HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
Gorai.005G223700 Gossypium raimondii HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
Lalb_Chr20g0122841 Lupinus albus HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 57.1
Prupe.6G193700 Prunus persica HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 59.5
Sabra16G0141100 Salix brachista HOM05D000723 ORTHO05D001760 1.1e-06 57.0 42 57.1
Duzib147G1011 Durio zibethinus HOM05D000723 ORTHO05D001760 1.4e-06 56.6 42 61.9
Lj3g0025616 Lotus japonicus HOM05D000723 ORTHO05D001760 1.4e-06 56.6 42 61.9
PSO675G8752 Papaver somniferum HOM05D000723 ORTHO05D001760 1.4e-06 56.6 39 59.0
Potri.005G071600 Populus trichocarpa HOM05D000723 ORTHO05D001760 1.4e-06 56.6 46 54.3
Prupe.8G065300 Prunus persica HOM05D000723 ORTHO05D001760 1.4e-06 56.6 42 59.5
PGR119G0510 Punica granatum HOM05D000723 ORTHO05D001760 1.4e-06 56.6 42 61.9
Atru.chr3.1342 Acer truncatum HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 61.9
Actinidia06537 Actinidia chinensis HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
COL.COLO4_18438 Corchorus olitorius HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 61.9
FvH4_1g20220 Fragaria vesca HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
HanXRQChr10g0303591 Helianthus annuus HOM05D000723 ORTHO05D001760 1.8e-06 56.2 39 59.0
Nn5g29995 Nelumbo nucifera HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
Peaxi162Scf00299g01141 Petunia axillaris HOM05D000723 ORTHO05D001760 1.8e-06 56.2 34 61.8
Rhsim10G0167900 Rhododendron simsii HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
vmacro12988 Vaccinium macrocarpon HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 59.5
GSVIVG01003433001 Vitis vinifera HOM05D000723 ORTHO05D001760 1.8e-06 56.2 42 57.1
Duzib248G1074 Durio zibethinus HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Lsat_1_v5_gn_9_115140 Lactuca sativa HOM05D000723 ORTHO05D001760 2.4e-06 55.8 52 48.1
Lalb_Chr05g0217611 Lupinus albus HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Nitab4.5_0000241g0140 Nicotiana tabacum HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Nitab4.5_0008985g0010 Nicotiana tabacum HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Oeu062317.1 Olea europaea HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
PSO732G0667 Papaver somniferum HOM05D000723 ORTHO05D001760 2.4e-06 55.8 39 59.0
Potri.007G097300 Populus trichocarpa HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Sabra05G0058600 Salix brachista HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Sabra07G0080500 Salix brachista HOM05D000723 ORTHO05D001760 2.4e-06 55.8 42 59.5
Aa31LG7G14370 Aethionema arabicum HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 57.1
Cpa.g.sc55.69 Carica papaya HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 59.5
Ciclev10028220m.g Citrus clementina HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 54.8
Duzib187G0349 Durio zibethinus HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 59.5
Lsat_1_v5_gn_9_116761 Lactuca sativa HOM05D000723 ORTHO05D001760 3.1e-06 55.5 34 61.8
Manes.11G135000 Manihot esculenta HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 57.1
Psat7g104320 Pisum sativum HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 59.5
Potri.001G234900 Populus trichocarpa HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 54.8
SalBow6G5011 Salvia bowleyana HOM05D000723 ORTHO05D001760 3.1e-06 55.5 34 64.7
SHI04977 Sapria himalayana HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 59.5
Thecc.01G095300 Theobroma cacao HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 59.5
TPR.G2833 Trifolium pratense HOM05D000723 ORTHO05D001760 3.1e-06 55.5 42 59.5
CSS0005330 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
CSS0006630 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 4.1e-06 55.1 34 61.8
Cc07_g14550 Coffea canephora HOM05D000723 ORTHO05D001760 4.1e-06 55.1 34 61.8
Glyma.15G041600 Glycine max HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
Gohir.A03G038200 Gossypium hirsutum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 59.5
Gohir.D03G130200 Gossypium hirsutum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 59.5
Gorai.003G136900 Gossypium raimondii HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 59.5
Lsat_1_v5_gn_5_166481 Lactuca sativa HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 59.5
Nitab4.5_0003179g0100 Nicotiana tabacum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
PSO206G0040 Papaver somniferum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 54.8
PSO339G4845 Papaver somniferum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 54.8
Phvul.002G260600 Phaseolus vulgaris HOM05D000723 ORTHO05D001760 4.1e-06 55.1 34 67.6
Phvul.L002143 Phaseolus vulgaris HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
QL01p033511 Quercus lobata HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 59.5
Sc21g0005430 Simmondsia chinensis HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
Solyc11g073160.3 Solanum lycopersicum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
Sopen11g030800 Solanum pennellii HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
PGSC0003DMG400015538 Solanum tuberosum HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
TWI77G0013 Tripterygium wilfordii HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 59.5
VMungo1080G1615 Vigna mungo HOM05D000723 ORTHO05D001760 4.1e-06 55.1 42 57.1
Cc01_g12240 Coffea canephora HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 57.1
COL.COLO4_27298 Corchorus olitorius HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 57.1
Dinv26275 Davidia involucrata HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 54.8
Eucgr.J02077 Eucalyptus grandis HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 57.1
Gorai.011G111400 Gossypium raimondii HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 59.5
TAR633G0699 Trochodendron aralioides HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 57.1
vmacro14503 Vaccinium macrocarpon HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 54.8
GSVIVG01025042001 Vitis vinifera HOM05D000723 ORTHO05D001760 5.4e-06 54.7 42 57.1
Glyma.08G070400 Glycine max HOM05D000723 ORTHO05D001760 7.0e-06 54.3 42 57.1
Lj1A161T64 Lonicera japonica HOM05D000723 ORTHO05D001760 7.0e-06 54.3 42 57.1
Lj4g0010797 Lotus japonicus HOM05D000723 ORTHO05D001760 7.0e-06 54.3 34 58.8
MD03G1100600 Malus domestica HOM05D000723 ORTHO05D001760 7.0e-06 54.3 42 54.8
QL06p048003 Quercus lobata HOM05D000723 ORTHO05D001760 7.0e-06 54.3 42 54.8
SalBow6G5851 Salvia bowleyana HOM05D000723 ORTHO05D001760 7.0e-06 54.3 34 64.7
SMO364G0807 Selaginella moellendorffii HOM05D000723 ORTHO05D001760 7.0e-06 54.3 42 61.9
Thecc.09G328600 Theobroma cacao HOM05D000723 ORTHO05D001760 7.0e-06 54.3 39 56.4
Ciclev10025787m.g Citrus clementina HOM05D000723 ORTHO05D001760 9.1e-06 53.9 42 57.1
Eucgr.G00876 Eucalyptus grandis HOM05D000723 ORTHO05D001760 9.1e-06 53.9 42 52.4
Glyma.08G132700 Glycine max HOM05D000723 ORTHO05D001760 9.1e-06 53.9 42 59.5
Manes.12G129700 Manihot esculenta HOM05D000723 ORTHO05D001760 9.1e-06 53.9 42 57.1
Oeu040716.1 Olea europaea HOM05D000723 ORTHO05D001760 9.1e-06 53.9 37 64.9
THA.LOC104807677 Tarenaya hassleriana HOM05D000723 ORTHO05D001760 9.1e-06 53.9 42 54.8
THA.LOC104810798 Tarenaya hassleriana HOM05D000723 ORTHO05D001760 9.1e-06 53.9 42 57.1


User provided reference genes

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