Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008990.3 Olea europaea HOM05D000161 ORTHO05D005857 1.4e-300 1035.4 498 100.0
Oeu008737.1 Olea europaea HOM05D000161 ORTHO05D005857 2.4e-183 646.0 549 65.4
vmacro11023 Vaccinium macrocarpon HOM05D000161 ORTHO05D005857 4.7e-171 605.1 501 64.1
Rhsim02G0171600 Rhododendron simsii HOM05D000161 ORTHO05D005857 3.3e-164 582.4 499 62.3
Cc09_g04450 Coffea canephora HOM05D000161 ORTHO05D005857 2.1e-163 579.7 565 57.5
SGA_v2.0_scaffold423G51450 Striga asiatica HOM05D000161 ORTHO05D005857 3.6e-163 578.9 498 61.4
Ciclev10011903m.g Citrus clementina HOM05D000161 ORTHO05D005857 1.2e-161 573.9 497 60.8
Dinv05290 Davidia involucrata HOM05D000161 ORTHO05D005857 2.6e-161 572.8 498 61.0
Solyc10g005110.3 Solanum lycopersicum HOM05D000161 ORTHO05D005857 7.6e-161 571.2 497 60.4
Sopen10g001130 Solanum pennellii HOM05D000161 ORTHO05D005857 9.9e-161 570.9 497 60.2
SalBow8G0095 Salvia bowleyana HOM05D000161 ORTHO05D005857 1.3e-160 570.5 519 58.8
CSS0003887 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 1.7e-160 570.1 503 59.8
CAN.G465.6 Capsicum annuum HOM05D000161 ORTHO05D005857 2.9e-160 569.3 499 59.9
CiPaw.06G002700 Carya illinoinensis HOM05D000161 ORTHO05D005857 2.9e-160 569.3 498 60.6
Peaxi162Scf00005g00134 Petunia axillaris HOM05D000161 ORTHO05D005857 2.9e-160 569.3 497 60.4
PGSC0003DMG400011264 Solanum tuberosum HOM05D000161 ORTHO05D005857 4.9e-160 568.5 499 59.9
MSTRG.16382 Avicennia marina HOM05D000161 ORTHO05D005857 5.4e-159 565.1 498 59.6
arahy.Tifrunner.gnm1.ann1.S9CZ9A Arachis hypogaea HOM05D000161 ORTHO05D005857 2.7e-158 562.8 497 59.4
PGR044G2307 Punica granatum HOM05D000161 ORTHO05D005857 2.7e-158 562.8 498 59.2
Haze_00005 Corylus avellana HOM05D000161 ORTHO05D005857 6.0e-158 561.6 499 59.7
arahy.Tifrunner.gnm1.ann1.DVM8T3 Arachis hypogaea HOM05D000161 ORTHO05D005857 7.8e-158 561.2 497 59.2
Nitab4.5_0000075g0030 Nicotiana tabacum HOM05D000161 ORTHO05D005857 1.3e-157 560.5 504 58.5
Nitab4.5_0011255g0010 Nicotiana tabacum HOM05D000161 ORTHO05D005857 1.3e-157 560.5 498 59.0
MBI18_g38427_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D005857 3.0e-157 559.3 500 59.6
Atru.chr8.1036 Acer truncatum HOM05D000161 ORTHO05D005857 5.1e-157 558.5 497 59.0
Manes.16G000600 Manihot esculenta HOM05D000161 ORTHO05D005857 1.1e-156 557.4 497 59.2
QL04p064793 Quercus lobata HOM05D000161 ORTHO05D005857 1.1e-156 557.4 498 59.4
Nn7g38388 Nelumbo nucifera HOM05D000161 ORTHO05D005857 1.5e-156 557.0 497 59.0
DCAR_024972 Daucus carota HOM05D000161 ORTHO05D005857 4.3e-156 555.4 498 59.6
CSS0041680 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 5.6e-156 555.1 499 59.1
CANSAT64G1800 Cannabis sativa HOM05D000161 ORTHO05D005857 1.3e-155 553.9 497 59.6
Eucgr.K01354 Eucalyptus grandis HOM05D000161 ORTHO05D005857 1.3e-155 553.9 503 59.0
THA.LOC104826018 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 1.3e-155 553.9 497 59.0
Potri.011G023900 Populus trichocarpa HOM05D000161 ORTHO05D005857 1.6e-155 553.5 497 59.4
QL04p064724 Quercus lobata HOM05D000161 ORTHO05D005857 1.6e-155 553.5 500 59.0
HanXRQChr03g0090181 Helianthus annuus HOM05D000161 ORTHO05D005857 2.8e-155 552.7 502 58.6
Cfa016257 Carpinus fangiana HOM05D000161 ORTHO05D005857 3.6e-155 552.4 498 59.0
ClCG07G011020 Citrullus lanatus HOM05D000161 ORTHO05D005857 3.6e-155 552.4 498 59.4
Prupe.3G183400 Prunus persica HOM05D000161 ORTHO05D005857 3.6e-155 552.4 498 58.8
PSO017G6394 Papaver somniferum HOM05D000161 ORTHO05D005857 6.2e-155 551.6 499 58.3
FvH4_6g39170 Fragaria vesca HOM05D000161 ORTHO05D005857 8.1e-155 551.2 498 58.8
FAN09G1815 Fragaria x ananassa HOM05D000161 ORTHO05D005857 8.1e-155 551.2 498 58.8
FAN14G2022 Fragaria x ananassa HOM05D000161 ORTHO05D005857 8.1e-155 551.2 498 58.8
Migut.M02037 Erythranthe guttata HOM05D000161 ORTHO05D005857 1.1e-154 550.8 499 58.5
TWI60G0112 Tripterygium wilfordii HOM05D000161 ORTHO05D005857 1.1e-154 550.8 497 58.8
Phvul.008G289900 Phaseolus vulgaris HOM05D000161 ORTHO05D005857 1.8e-154 550.1 497 58.8
RcHm_v2.0_Chr2g0153001 Rosa chinensis HOM05D000161 ORTHO05D005857 1.8e-154 550.1 498 58.8
FAN05G2261 Fragaria x ananassa HOM05D000161 ORTHO05D005857 2.4e-154 549.7 498 58.6
PSO384G2739 Papaver somniferum HOM05D000161 ORTHO05D005857 2.4e-154 549.7 499 57.9
LjContig00081g0009344 Lotus japonicus HOM05D000161 ORTHO05D005857 3.1e-154 549.3 498 59.2
PSO478G0506 Papaver somniferum HOM05D000161 ORTHO05D005857 3.1e-154 549.3 499 58.3
TPR.G35901 Trifolium pratense HOM05D000161 ORTHO05D005857 3.1e-154 549.3 497 58.8
Sabra11G0014900 Salix brachista HOM05D000161 ORTHO05D005857 5.3e-154 548.5 497 59.0
Sc13g0008500 Simmondsia chinensis HOM05D000161 ORTHO05D005857 5.3e-154 548.5 499 58.7
FAN02G1171 Fragaria x ananassa HOM05D000161 ORTHO05D005857 6.9e-154 548.1 498 58.4
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 9.0e-154 547.7 497 58.4
Lj3g0003708 Lotus japonicus HOM05D000161 ORTHO05D005857 9.0e-154 547.7 497 59.6
MD17G1131200 Malus domestica HOM05D000161 ORTHO05D005857 9.0e-154 547.7 498 58.2
A10p02010 Brassica napus HOM05D000161 ORTHO05D005857 1.5e-153 547.0 497 58.6
ECA240G1954 Erigeron canadensis HOM05D000161 ORTHO05D005857 1.5e-153 547.0 499 58.3
Glyma.14G003200 Glycine max HOM05D000161 ORTHO05D005857 2.0e-153 546.6 497 59.4
Medtr5g098800 Medicago truncatula HOM05D000161 ORTHO05D005857 2.0e-153 546.6 499 58.5
BraA10t42474Z Brassica rapa HOM05D000161 ORTHO05D005857 2.6e-153 546.2 497 58.4
Lj6A29G59 Lonicera japonica HOM05D000161 ORTHO05D005857 2.6e-153 546.2 501 58.9
Hund11764 Selenicereus undatus HOM05D000161 ORTHO05D005857 5.8e-153 545.0 497 57.9
AL1G12980 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 7.6e-153 544.7 497 58.6
C08p52750 Brassica napus HOM05D000161 ORTHO05D005857 7.6e-153 544.7 497 58.1
Sp1g02440 Schrenkiella parvula HOM05D000161 ORTHO05D005857 7.6e-153 544.7 497 58.1
MD09G1144600 Malus domestica HOM05D000161 ORTHO05D005857 9.9e-153 544.3 498 57.8
Thhalv10007888m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 1.7e-152 543.5 497 58.6
BraA09t42165Z Brassica rapa HOM05D000161 ORTHO05D005857 2.9e-152 542.7 497 57.9
CARHR002850 Cardamine hirsuta HOM05D000161 ORTHO05D005857 2.9e-152 542.7 497 57.9
Aqoxy1G01372 Aquilegia oxysepala HOM05D000161 ORTHO05D005857 3.8e-152 542.3 497 57.9
C08p52850 Brassica napus HOM05D000161 ORTHO05D005857 3.8e-152 542.3 497 57.9
AT1G03475 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 4.9e-152 542.0 497 58.6
Hma1.2p1_0166F.1_g073470 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 4.9e-152 542.0 500 58.0
Psat2g001760 Pisum sativum HOM05D000161 ORTHO05D005857 4.9e-152 542.0 497 58.4
Thecc.01G176100 Theobroma cacao HOM05D000161 ORTHO05D005857 4.9e-152 542.0 497 57.9
Lalb_Chr04g0247041 Lupinus albus HOM05D000161 ORTHO05D005857 6.4e-152 541.6 501 57.1
HPP92_026322 Vanilla planifolia HOM05D000161 ORTHO05D005857 6.4e-152 541.6 499 56.5
A09p68290 Brassica napus HOM05D000161 ORTHO05D005857 8.4e-152 541.2 497 57.7
CsaV3_4G007220 Cucumis sativus L. HOM05D000161 ORTHO05D005857 1.1e-151 540.8 498 58.2
EL10Ac3g05707 Beta vulgaris HOM05D000161 ORTHO05D005857 1.9e-151 540.0 497 58.1
unitig_32.g11549 Utricularia gibba HOM05D000161 ORTHO05D005857 1.9e-151 540.0 497 56.7
Ah.07g209030 Amaranthus hybridus HOM05D000161 ORTHO05D005857 2.4e-151 539.7 494 58.5
BcaB02g06929 Brassica carinata HOM05D000161 ORTHO05D005857 2.4e-151 539.7 497 58.1
Carub.0006s3385 Capsella rubella HOM05D000161 ORTHO05D005857 5.4e-151 538.5 497 57.9
Ca_06491_v3 Cicer arietinum L. HOM05D000161 ORTHO05D005857 9.3e-151 537.7 498 58.2
BcaC05g24526 Brassica carinata HOM05D000161 ORTHO05D005857 1.6e-150 537.0 498 57.6
C05p01960 Brassica napus HOM05D000161 ORTHO05D005857 1.6e-150 537.0 498 57.6
BolC5t28975H Brassica oleracea HOM05D000161 ORTHO05D005857 1.6e-150 537.0 498 57.6
CDE02G0797 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 2.7e-150 536.2 499 56.3
ATR0763G015 Amborella trichopoda HOM05D000161 ORTHO05D005857 4.6e-150 535.4 503 57.1
Gorai.004G062500 Gossypium raimondii HOM05D000161 ORTHO05D005857 4.6e-150 535.4 497 57.5
Gohir.A08G050600 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.3e-149 533.9 497 57.1
GSVIVG01015906001 Vitis vinifera HOM05D000161 ORTHO05D005857 2.3e-149 533.1 466 60.5
Carub.0001s0261 Capsella rubella HOM05D000161 ORTHO05D005857 3.0e-149 532.7 502 57.2
Duzib138G0552 Durio zibethinus HOM05D000161 ORTHO05D005857 8.7e-149 531.2 497 56.9
BolC8t52801H Brassica oleracea HOM05D000161 ORTHO05D005857 9.6e-148 527.7 497 56.9
TAR624G0726 Trochodendron aralioides HOM05D000161 ORTHO05D005857 8.1e-147 524.6 480 57.9
TAR626G1695 Trochodendron aralioides HOM05D000161 ORTHO05D005857 3.8e-144 515.8 474 57.8
Gohir.A07G184900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 9.3e-143 511.1 497 55.1
Gohir.D08G060400 Gossypium hirsutum HOM05D000161 ORTHO05D005857 2.7e-142 509.6 460 58.3
AUR62016021 Chenopodium quinoa HOM05D000161 ORTHO05D005857 1.3e-141 507.3 474 58.2
Zm00001eb071140 Zea mays HOM05D000161 ORTHO05D005857 1.8e-141 506.9 505 55.0
Os04g0610800 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D005857 6.7e-141 505.0 503 55.1
AL6G49730 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 4.8e-139 498.8 468 56.6
Sed0024620 Sechium edule HOM05D000161 ORTHO05D005857 1.8e-138 496.9 475 56.8
AUR62021226 Chenopodium quinoa HOM05D000161 ORTHO05D005857 3.1e-138 496.1 474 56.3
BcaC07g42243 Brassica carinata HOM05D000161 ORTHO05D005857 2.0e-137 493.4 474 56.3
Lsat_1_v5_gn_3_111240 Lactuca sativa HOM05D000161 ORTHO05D005857 3.4e-137 492.7 504 55.6
BcaC07g42252 Brassica carinata HOM05D000161 ORTHO05D005857 1.0e-136 491.1 474 56.1
Gorai.007G172100 Gossypium raimondii HOM05D000161 ORTHO05D005857 8.7e-133 478.0 474 54.9
Cpa.g.sc417.1 Carica papaya HOM05D000161 ORTHO05D005857 9.6e-132 474.6 500 52.0
MELO3C016226.2 Cucumis melo HOM05D000161 ORTHO05D005857 4.8e-131 472.2 498 53.2
Pp3c22_5800 Physcomitrium patens HOM05D000161 ORTHO05D005857 1.1e-130 471.1 506 50.8
AagrBONN_evm.TU.Sc2ySwM_228.282 Anthoceros agrestis HOM05D000161 ORTHO05D005857 2.4e-130 469.9 498 50.4
Pp3c21_600 Physcomitrium patens HOM05D000161 ORTHO05D005857 3.4e-129 466.1 499 49.7
Mapoly0039s0053 Marchantia polymorpha HOM05D000161 ORTHO05D005857 7.6e-129 464.9 496 50.2
Sp6g03240 Schrenkiella parvula HOM05D000161 ORTHO05D005857 6.5e-128 461.8 455 54.5
SMO354G0013 Selaginella moellendorffii HOM05D000161 ORTHO05D005857 8.2e-123 444.9 461 51.2
BcaC07g42260 Brassica carinata HOM05D000161 ORTHO05D005857 7.7e-113 411.8 401 53.9
MCO07G306 Micromonas commoda HOM05D000161 ORTHO05D005857 8.8e-109 398.3 496 45.6
Gorai.001G214600 Gossypium raimondii HOM05D000161 ORTHO05D005857 1.3e-107 394.4 434 50.5
CDE05G1536 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 4.8e-107 392.5 499 46.3
Cre02.g085450 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 4.2e-103 379.4 501 42.9
PRCOL_00002331 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 4.2e-103 379.4 464 44.4
Gohir.D11G161800 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.7e-91 340.9 223 75.8
Gohir.A11G154900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 4.5e-89 332.8 227 74.4
Zm00001eb430670 Zea mays HOM05D000161 ORTHO05D005857 3.6e-86 323.2 231 71.9
Gohir.D07G191700 Gossypium hirsutum HOM05D000161 ORTHO05D005857 4.0e-85 319.7 212 74.1
CBR_g45705 Chara braunii HOM05D000161 ORTHO05D005857 6.3e-83 312.4 497 38.4
Cfa025537 Carpinus fangiana HOM05D000161 ORTHO05D005857 7.0e-82 308.9 476 38.0
Thhalv10029252m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 7.7e-81 305.4 370 47.6
THA.LOC104815952 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 7.3e-79 298.9 199 74.4
AT4G03205 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 4.0e-77 293.1 192 76.6
Haze_26605 Corylus avellana HOM05D000161 ORTHO05D005857 1.6e-73 281.2 441 36.5
PSO339G2005 Papaver somniferum HOM05D000161 ORTHO05D005857 1.1e-66 258.5 129 90.7
arahy.Tifrunner.gnm1.ann1.I5BL8A Arachis hypogaea HOM05D000161 ORTHO05D005857 8.1e-54 215.7 180 61.7
Hma1.2p1_2159F.1_g315510 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 1.1e-47 195.3 117 82.1
MCO09G037 Micromonas commoda HOM05D000161 ORTHO05D005857 1.9e-47 194.5 484 28.7
Pp3c15_4200 Physcomitrium patens HOM05D000161 ORTHO05D005857 1.4e-45 188.3 481 27.9
AagrBONN_evm.TU.Sc2ySwM_228.3299 Anthoceros agrestis HOM05D000161 ORTHO05D005857 5.2e-45 186.4 476 28.8
Mapoly0070s0075 Marchantia polymorpha HOM05D000161 ORTHO05D005857 1.5e-44 184.9 500 27.0
CBR_g23778 Chara braunii HOM05D000161 ORTHO05D005857 3.4e-44 183.7 465 29.2
arahy.Tifrunner.gnm1.ann1.0Q00UB Arachis hypogaea HOM05D000235 ORTHO05D000147 2.9e-43 180.6 157 59.2
Cre02.g092600 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 3.9e-40 170.2 479 26.7
PRCOL_00006910 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 1.9e-34 151.4 492 25.6
SEGI_02394 Sequoiadendron giganteum HOM05D000161 ORTHO05D005857 1.1e-31 142.1 377 27.9
arahy.Tifrunner.gnm1.ann1.F4AYRR Arachis hypogaea HOM05D000161 ORTHO05D005857 2.6e-28 131.0 92 69.6
SHI00986 Sapria himalayana HOM05D000161 ORTHO05D005857 2.1e-25 121.3 56 92.9
Oeu007333.2 Olea europaea HOM05D001280 ORTHO05D001125 8.1e-22 109.4 101 59.4
arahy.Tifrunner.gnm1.ann1.0Z8MR5 Arachis hypogaea HOM05D000161 ORTHO05D003903 7.6e-20 102.8 62 79.0
CAN.G129.44 Capsicum annuum HOM05D000161 ORTHO05D005857 1.4e-18 98.6 93 60.2
CARHR251640 Cardamine hirsuta HOM05D000161 ORTHO05D116224 7.1e-18 96.3 57 78.9
arahy.Tifrunner.gnm1.ann1.6HI1EE Arachis hypogaea HOM05D000161 ORTHO05D005857 3.7e-14 84.0 49 75.5
RcHm_v2.0_Chr6g0298511 Rosa chinensis HOM05D000161 ORTHO05D340689 2.4e-13 81.3 117 44.4
CARHR251650 Cardamine hirsuta HOM05D000161 ORTHO05D115956 1.5e-12 78.6 65 61.5
arahy.Tifrunner.gnm1.ann1.1EXH41 Arachis hypogaea HOM05D000161 ORTHO05D003770 2.0e-12 78.2 42 73.8
arahy.Tifrunner.gnm1.ann1.DD88BD Arachis hypogaea HOM05D000161 ORTHO05D086871 1.8e-08 65.1 39 66.7
QL05p043498 Quercus lobata HOM05D020871 ORTHO05D337541 6.7e-08 63.2 51 54.9


User provided reference genes

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