Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 3.2e-156 555.1 282 100.0
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 3.1e-87 325.9 296 59.1
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 3.1e-87 325.9 296 59.1
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 9.8e-81 304.3 294 56.1
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 1.4e-55 220.7 296 44.6
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 4.7e-51 205.7 327 41.9
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 2.9e-48 196.4 333 38.7
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 6.4e-48 195.3 332 38.6
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 3.2e-47 193.0 334 38.9
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 5.4e-47 192.2 332 38.3
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.7e-45 187.2 334 37.4
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 3.9e-45 186.0 154 60.4
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 6.6e-45 185.3 330 37.0
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 3.3e-44 183.0 157 57.3
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 1.5e-41 174.1 326 35.9
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 1.3e-40 171.0 309 38.5
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 5.4e-39 165.6 290 37.2
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 7.1e-39 165.2 296 36.8
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 1.5e-36 157.5 287 37.6
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 2.8e-35 153.3 287 39.0
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 8.1e-35 151.8 286 36.7
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 1.1e-34 151.4 294 34.0
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 1.8e-34 150.6 319 35.1
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 6.9e-34 148.7 320 34.7
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 2.0e-33 147.1 310 33.2
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 3.4e-33 146.4 302 34.4
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 4.4e-33 146.0 287 38.0
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 6.4e-32 142.1 289 36.3
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 1.4e-31 141.0 325 33.2
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 2.4e-31 140.2 311 33.8
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 1.2e-30 137.9 188 43.6
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 2.1e-30 137.1 316 33.5
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 2.1e-30 137.1 301 33.6
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 6.0e-30 135.6 316 34.5
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 7.9e-30 135.2 274 35.4
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 1.0e-29 134.8 332 31.3
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 2.3e-29 133.7 268 35.8
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 3.0e-29 133.3 275 34.9
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 3.9e-29 132.9 317 33.1
MSTRG.13926 Avicennia marina HOM05D006943 ORTHO05D008565 5.1e-29 132.5 132 53.0
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 6.6e-29 132.1 346 30.1
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 1.1e-28 131.3 307 31.6
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 1.5e-28 131.0 334 30.8
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 2.5e-28 130.2 310 33.5
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 2.5e-28 130.2 352 28.7
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 3.3e-28 129.8 283 34.3
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 4.3e-28 129.4 321 33.3
MSTRG.13939 Avicennia marina HOM05D006943 ORTHO05D008565 5.6e-28 129.0 132 52.3
MSTRG.13928 Avicennia marina HOM05D006943 ORTHO05D008565 7.4e-28 128.6 132 52.3
MSTRG.13927 Avicennia marina HOM05D006943 ORTHO05D008565 9.6e-28 128.3 132 51.5
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 1.6e-27 127.5 301 34.6
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 2.8e-27 126.7 307 31.9
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 4.8e-27 125.9 321 30.8
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 1.1e-26 124.8 301 33.9
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 1.1e-26 124.8 320 30.3
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 1.8e-26 124.0 280 33.9
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 2.4e-26 123.6 289 32.9
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 2.4e-26 123.6 289 32.9
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 1.2e-25 121.3 321 32.1
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 1.5e-25 120.9 162 43.2
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.4e-25 119.8 158 46.2
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 4.5e-25 119.4 144 47.9
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 4.5e-25 119.4 144 47.9
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 4.5e-25 119.4 325 29.8
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 7.6e-25 118.6 289 32.2
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 1.3e-24 117.9 175 40.0
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 1.7e-24 117.5 302 31.8
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 2.2e-24 117.1 188 38.3
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 2.2e-24 117.1 302 31.1
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 2.9e-24 116.7 323 29.4
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 3.8e-24 116.3 318 32.4
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 4.9e-24 115.9 322 31.1
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 4.9e-24 115.9 322 31.1
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 4.9e-24 115.9 302 31.8
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 8.4e-24 115.2 321 30.8
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 1.1e-23 114.8 161 39.8
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 3.2e-23 113.2 303 31.0
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 3.2e-23 113.2 185 37.3
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 5.5e-23 112.5 280 33.6
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 9.3e-23 111.7 281 33.8
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 2.1e-22 110.5 307 30.9
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 2.7e-22 110.2 300 30.3
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 6.0e-22 109.0 293 30.4
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 1.8e-21 107.5 217 36.4
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 7.4e-20 102.1 188 34.0
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 1.3e-19 101.3 190 37.4
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 1.3e-19 101.3 317 29.0
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 2.1e-19 100.5 74 59.5
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 3.7e-19 99.8 157 38.9
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 3.7e-19 99.8 188 35.6
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 3.7e-19 99.8 159 38.4
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 8.1e-19 98.6 135 41.5
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 1.1e-18 98.2 320 27.5
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 1.1e-18 98.2 148 40.5
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 1.8e-18 97.4 293 29.4
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 2.4e-18 97.1 178 33.7
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 2.4e-18 97.1 177 34.5
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 2.6e-17 93.6 277 25.3
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 1.0e-16 91.7 78 51.3
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 6.5e-16 89.0 312 27.6
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 5.5e-15 85.9 252 30.2
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 2.3e-13 80.5 73 47.9
Zm00001eb233350 Zea mays HOM05D006943 ORTHO05D008565 5.7e-12 75.9 306 24.5
Atru.chr6.219 Acer truncatum HOM05D006943 ORTHO05D008565 7.4e-12 75.5 62 54.8
VMungo0720G0266 Vigna mungo HOM05D006943 ORTHO05D008565 4.8e-11 72.8 134 35.8
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 1.8e-10 70.9 216 30.6
Os02g0174300 Oryza sativa ssp. japonica HOM05D006943 ORTHO05D008565 1.8e-10 70.9 313 23.0
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 2.6e-09 67.0 104 40.4
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 2.6e-09 67.0 167 32.3
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 2.5e-07 60.5 63 42.9
VMungo1215G2891 Vigna mungo HOM05D006943 ORTHO05D008565 3.2e-07 60.1 160 29.4
VMungo0540G2247 Vigna mungo HOM05D002022 ORTHO05D010195 1.2e-06 58.2 103 35.9
Nitab4.5_0003444g0010 Nicotiana tabacum HOM05D003725 ORTHO05D004294 3.5e-06 56.6 120 28.3


User provided reference genes

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