Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008737.1 Olea europaea HOM05D000161 ORTHO05D005857 0.0e+00 1116.3 551 100.0
Oeu008990.3 Olea europaea HOM05D000161 ORTHO05D005857 4.1e-184 648.7 549 65.4
vmacro11023 Vaccinium macrocarpon HOM05D000161 ORTHO05D005857 5.2e-163 578.6 561 57.8
Rhsim02G0171600 Rhododendron simsii HOM05D000161 ORTHO05D005857 1.2e-162 577.4 498 62.2
CAN.G465.6 Capsicum annuum HOM05D000161 ORTHO05D005857 4.4e-162 575.5 548 57.3
Solyc10g005110.3 Solanum lycopersicum HOM05D000161 ORTHO05D005857 5.8e-162 575.1 547 58.3
Sopen10g001130 Solanum pennellii HOM05D000161 ORTHO05D005857 4.9e-161 572.0 547 58.0
MSTRG.16382 Avicennia marina HOM05D000161 ORTHO05D005857 1.1e-160 570.9 552 57.6
SGA_v2.0_scaffold423G51450 Striga asiatica HOM05D000161 ORTHO05D005857 5.4e-160 568.5 557 56.7
CSS0003887 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 3.5e-159 565.8 509 59.3
PGSC0003DMG400011264 Solanum tuberosum HOM05D000161 ORTHO05D005857 4.6e-159 565.5 494 59.7
Cc09_g04450 Coffea canephora HOM05D000161 ORTHO05D005857 7.8e-159 564.7 583 55.1
Dinv05290 Davidia involucrata HOM05D000161 ORTHO05D005857 3.0e-158 562.8 549 57.2
Peaxi162Scf00005g00134 Petunia axillaris HOM05D000161 ORTHO05D005857 3.9e-158 562.4 556 56.7
SalBow8G0095 Salvia bowleyana HOM05D000161 ORTHO05D005857 8.1e-156 554.7 581 54.7
QL04p064793 Quercus lobata HOM05D000161 ORTHO05D005857 1.1e-155 554.3 497 59.8
Nitab4.5_0011255g0010 Nicotiana tabacum HOM05D000161 ORTHO05D005857 1.4e-155 553.9 563 56.1
DCAR_024972 Daucus carota HOM05D000161 ORTHO05D005857 5.3e-155 552.0 495 59.2
HanXRQChr03g0090181 Helianthus annuus HOM05D000161 ORTHO05D005857 6.9e-155 551.6 502 58.8
Nitab4.5_0000075g0030 Nicotiana tabacum HOM05D000161 ORTHO05D005857 9.0e-155 551.2 566 55.1
Atru.chr8.1036 Acer truncatum HOM05D000161 ORTHO05D005857 1.2e-154 550.8 549 55.9
Phvul.008G289900 Phaseolus vulgaris HOM05D000161 ORTHO05D005857 1.5e-154 550.4 545 55.8
CSS0041680 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D005857 2.0e-154 550.1 549 56.3
Ciclev10011903m.g Citrus clementina HOM05D000161 ORTHO05D005857 2.0e-154 550.1 550 55.6
Migut.M02037 Erythranthe guttata HOM05D000161 ORTHO05D005857 2.0e-154 550.1 550 54.7
CiPaw.06G002700 Carya illinoinensis HOM05D000161 ORTHO05D005857 4.5e-154 548.9 498 59.0
PGR044G2307 Punica granatum HOM05D000161 ORTHO05D005857 2.2e-153 546.6 557 55.3
PSO478G0506 Papaver somniferum HOM05D000161 ORTHO05D005857 3.8e-153 545.8 561 53.3
arahy.Tifrunner.gnm1.ann1.S9CZ9A Arachis hypogaea HOM05D000161 ORTHO05D005857 6.4e-153 545.0 557 55.3
Lj6A29G59 Lonicera japonica HOM05D000161 ORTHO05D005857 8.4e-153 544.7 498 58.4
Potri.011G023900 Populus trichocarpa HOM05D000161 ORTHO05D005857 8.4e-153 544.7 558 55.6
Sabra11G0014900 Salix brachista HOM05D000161 ORTHO05D005857 8.4e-153 544.7 501 58.3
THA.LOC104826018 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 8.4e-153 544.7 513 57.5
Hma1.2p1_0166F.1_g073470 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 1.1e-152 544.3 565 54.5
Manes.16G000600 Manihot esculenta HOM05D000161 ORTHO05D005857 1.1e-152 544.3 566 53.7
Nn7g38388 Nelumbo nucifera HOM05D000161 ORTHO05D005857 1.1e-152 544.3 546 55.3
PSO384G2739 Papaver somniferum HOM05D000161 ORTHO05D005857 1.9e-152 543.5 503 56.9
arahy.Tifrunner.gnm1.ann1.DVM8T3 Arachis hypogaea HOM05D000161 ORTHO05D005857 2.4e-152 543.1 553 55.3
Sc13g0008500 Simmondsia chinensis HOM05D000161 ORTHO05D005857 2.4e-152 543.1 498 57.8
Glyma.14G003200 Glycine max HOM05D000161 ORTHO05D005857 3.2e-152 542.7 538 56.1
MBI18_g38427_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D005857 3.2e-152 542.7 507 57.6
Hund11764 Selenicereus undatus HOM05D000161 ORTHO05D005857 3.2e-152 542.7 547 55.0
TWI60G0112 Tripterygium wilfordii HOM05D000161 ORTHO05D005857 3.2e-152 542.7 550 54.4
ECA240G1954 Erigeron canadensis HOM05D000161 ORTHO05D005857 5.4e-152 542.0 496 58.3
Eucgr.K01354 Eucalyptus grandis HOM05D000161 ORTHO05D005857 9.3e-152 541.2 564 55.1
QL04p064724 Quercus lobata HOM05D000161 ORTHO05D005857 9.3e-152 541.2 555 55.7
PSO017G6394 Papaver somniferum HOM05D000161 ORTHO05D005857 1.2e-151 540.8 560 53.2
Lj3g0003708 Lotus japonicus HOM05D000161 ORTHO05D005857 2.1e-151 540.0 550 55.8
A10p02010 Brassica napus HOM05D000161 ORTHO05D005857 3.5e-151 539.3 497 58.4
Medtr5g098800 Medicago truncatula HOM05D000161 ORTHO05D005857 3.5e-151 539.3 553 54.1
TPR.G35901 Trifolium pratense HOM05D000161 ORTHO05D005857 3.5e-151 539.3 554 54.7
BraA09t42165Z Brassica rapa HOM05D000161 ORTHO05D005857 7.9e-151 538.1 555 55.0
Haze_00005 Corylus avellana HOM05D000161 ORTHO05D005857 1.0e-150 537.7 550 55.5
C08p52750 Brassica napus HOM05D000161 ORTHO05D005857 1.3e-150 537.3 552 54.9
Psat2g001760 Pisum sativum HOM05D000161 ORTHO05D005857 1.3e-150 537.3 546 54.9
A09p68290 Brassica napus HOM05D000161 ORTHO05D005857 2.3e-150 536.6 555 54.8
CANSAT64G1800 Cannabis sativa HOM05D000161 ORTHO05D005857 2.3e-150 536.6 557 54.9
AT1G03475 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 3.0e-150 536.2 497 58.1
LjContig00081g0009344 Lotus japonicus HOM05D000161 ORTHO05D005857 3.9e-150 535.8 553 54.6
C08p52850 Brassica napus HOM05D000161 ORTHO05D005857 6.7e-150 535.0 552 54.7
MD17G1131200 Malus domestica HOM05D000161 ORTHO05D005857 6.7e-150 535.0 544 54.4
RcHm_v2.0_Chr2g0153001 Rosa chinensis HOM05D000161 ORTHO05D005857 6.7e-150 535.0 556 54.5
Sp1g02440 Schrenkiella parvula HOM05D000161 ORTHO05D005857 1.1e-149 534.3 550 55.1
EL10Ac3g05707 Beta vulgaris HOM05D000161 ORTHO05D005857 1.9e-149 533.5 538 55.6
Carub.0001s0261 Capsella rubella HOM05D000161 ORTHO05D005857 2.5e-149 533.1 500 58.4
FAN09G1815 Fragaria x ananassa HOM05D000161 ORTHO05D005857 2.5e-149 533.1 553 54.8
Thecc.01G176100 Theobroma cacao HOM05D000161 ORTHO05D005857 2.5e-149 533.1 527 55.6
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 3.3e-149 532.7 548 54.7
BcaC05g24526 Brassica carinata HOM05D000161 ORTHO05D005857 3.3e-149 532.7 497 58.1
C05p01960 Brassica napus HOM05D000161 ORTHO05D005857 3.3e-149 532.7 494 58.3
BolC5t28975H Brassica oleracea HOM05D000161 ORTHO05D005857 3.3e-149 532.7 497 58.1
BraA10t42474Z Brassica rapa HOM05D000161 ORTHO05D005857 3.3e-149 532.7 547 55.4
Thhalv10007888m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 5.6e-149 531.9 550 55.3
Lalb_Chr04g0247041 Lupinus albus HOM05D000161 ORTHO05D005857 5.6e-149 531.9 508 56.1
Gohir.A08G050600 Gossypium hirsutum HOM05D000161 ORTHO05D005857 1.3e-148 530.8 551 54.6
Cfa016257 Carpinus fangiana HOM05D000161 ORTHO05D005857 1.6e-148 530.4 557 54.0
FAN14G2022 Fragaria x ananassa HOM05D000161 ORTHO05D005857 1.6e-148 530.4 556 54.5
MD09G1144600 Malus domestica HOM05D000161 ORTHO05D005857 1.6e-148 530.4 544 54.2
Prupe.3G183400 Prunus persica HOM05D000161 ORTHO05D005857 1.6e-148 530.4 550 54.5
ClCG07G011020 Citrullus lanatus HOM05D000161 ORTHO05D005857 2.1e-148 530.0 559 54.7
FvH4_6g39170 Fragaria vesca HOM05D000161 ORTHO05D005857 2.1e-148 530.0 556 54.5
Ah.07g209030 Amaranthus hybridus HOM05D000161 ORTHO05D005857 2.8e-148 529.6 553 54.6
AL1G12980 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 3.7e-148 529.3 549 55.4
FAN05G2261 Fragaria x ananassa HOM05D000161 ORTHO05D005857 3.7e-148 529.3 553 54.6
FAN02G1171 Fragaria x ananassa HOM05D000161 ORTHO05D005857 4.8e-148 528.9 553 54.6
BcaB02g06929 Brassica carinata HOM05D000161 ORTHO05D005857 6.2e-148 528.5 545 55.2
Gorai.004G062500 Gossypium raimondii HOM05D000161 ORTHO05D005857 8.1e-148 528.1 551 54.8
CARHR002850 Cardamine hirsuta HOM05D000161 ORTHO05D005857 1.1e-147 527.7 549 54.8
Carub.0006s3385 Capsella rubella HOM05D000161 ORTHO05D005857 1.4e-147 527.3 544 54.4
Ca_06491_v3 Cicer arietinum L. HOM05D000161 ORTHO05D005857 1.8e-147 526.9 560 53.6
Aqoxy1G01372 Aquilegia oxysepala HOM05D000161 ORTHO05D005857 2.4e-147 526.6 558 54.1
CsaV3_4G007220 Cucumis sativus L. HOM05D000161 ORTHO05D005857 1.2e-146 524.2 554 53.8
Duzib138G0552 Durio zibethinus HOM05D000161 ORTHO05D005857 1.5e-146 523.9 549 53.6
CDE02G0797 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 4.5e-146 522.3 545 53.0
HPP92_026322 Vanilla planifolia HOM05D000161 ORTHO05D005857 4.5e-146 522.3 550 52.7
ATR0763G015 Amborella trichopoda HOM05D000161 ORTHO05D005857 1.3e-145 520.8 498 56.2
GSVIVG01015906001 Vitis vinifera HOM05D000161 ORTHO05D005857 2.2e-145 520.0 461 59.4
unitig_32.g11549 Utricularia gibba HOM05D000161 ORTHO05D005857 3.8e-145 519.2 551 53.0
TAR624G0726 Trochodendron aralioides HOM05D000161 ORTHO05D005857 7.1e-144 515.0 535 54.6
BolC8t52801H Brassica oleracea HOM05D000161 ORTHO05D005857 1.0e-142 511.1 556 53.2
Lsat_1_v5_gn_3_111240 Lactuca sativa HOM05D000161 ORTHO05D005857 8.7e-142 508.1 558 53.0
TAR626G1695 Trochodendron aralioides HOM05D000161 ORTHO05D005857 1.9e-141 506.9 472 57.6
Zm00001eb071140 Zea mays HOM05D000161 ORTHO05D005857 7.4e-141 505.0 528 53.4
AUR62016021 Chenopodium quinoa HOM05D000161 ORTHO05D005857 1.3e-140 504.2 528 53.2
Os04g0610800 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D005857 4.8e-140 502.3 528 53.2
Gohir.D08G060400 Gossypium hirsutum HOM05D000161 ORTHO05D005857 2.4e-139 500.0 455 58.0
BcaC07g42243 Brassica carinata HOM05D000161 ORTHO05D005857 3.1e-139 499.6 533 53.5
AL6G49730 Arabidopsis lyrata HOM05D000161 ORTHO05D005857 2.6e-138 496.5 463 57.0
BcaC07g42252 Brassica carinata HOM05D000161 ORTHO05D005857 5.8e-138 495.4 535 53.3
Gohir.A07G184900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 4.9e-137 492.3 552 50.5
AUR62021226 Chenopodium quinoa HOM05D000161 ORTHO05D005857 2.5e-136 490.0 527 52.4
Sed0024620 Sechium edule HOM05D000161 ORTHO05D005857 2.5e-136 490.0 532 53.2
Gorai.007G172100 Gossypium raimondii HOM05D000161 ORTHO05D005857 4.3e-133 479.2 523 52.2
Sp6g03240 Schrenkiella parvula HOM05D000161 ORTHO05D005857 2.0e-130 470.3 548 50.7
Cpa.g.sc417.1 Carica papaya HOM05D000161 ORTHO05D005857 5.9e-130 468.8 546 49.5
AagrBONN_evm.TU.Sc2ySwM_228.282 Anthoceros agrestis HOM05D000161 ORTHO05D005857 2.3e-126 456.8 534 48.5
MELO3C016226.2 Cucumis melo HOM05D000161 ORTHO05D005857 4.3e-125 452.6 546 49.8
Pp3c21_600 Physcomitrium patens HOM05D000161 ORTHO05D005857 3.7e-124 449.5 562 46.1
Pp3c22_5800 Physcomitrium patens HOM05D000161 ORTHO05D005857 8.2e-124 448.4 563 46.7
Mapoly0039s0053 Marchantia polymorpha HOM05D000161 ORTHO05D005857 2.6e-122 443.4 556 45.9
SMO354G0013 Selaginella moellendorffii HOM05D000161 ORTHO05D005857 4.5e-122 442.6 456 51.5
BcaC07g42260 Brassica carinata HOM05D000161 ORTHO05D005857 2.7e-111 406.8 396 53.8
Gorai.001G214600 Gossypium raimondii HOM05D000161 ORTHO05D005857 1.2e-106 391.3 438 49.5
MCO07G306 Micromonas commoda HOM05D000161 ORTHO05D005857 7.2e-104 382.1 548 43.1
CDE05G1536 Ceratophyllum demersum HOM05D000161 ORTHO05D005857 2.3e-102 377.1 545 43.7
PRCOL_00002331 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 3.7e-100 369.8 461 44.3
Cre02.g085450 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 1.3e-97 361.3 531 40.9
Gohir.D11G161800 Gossypium hirsutum HOM05D000161 ORTHO05D005857 5.0e-89 332.8 447 46.1
Thhalv10029252m.g Eutrema salsugineum HOM05D000161 ORTHO05D005857 2.1e-87 327.4 333 53.2
Gohir.A11G154900 Gossypium hirsutum HOM05D000161 ORTHO05D005857 2.8e-87 327.0 298 60.4
Zm00001eb430670 Zea mays HOM05D000161 ORTHO05D005857 8.0e-87 325.5 407 47.4
Cfa025537 Carpinus fangiana HOM05D000161 ORTHO05D005857 1.5e-80 304.7 494 37.9
Gohir.D07G191700 Gossypium hirsutum HOM05D000161 ORTHO05D005857 2.5e-80 303.9 244 63.1
CBR_g45705 Chara braunii HOM05D000161 ORTHO05D005857 8.9e-78 295.4 553 36.7
THA.LOC104815952 Tarenaya hassleriana HOM05D000161 ORTHO05D005857 2.6e-77 293.9 365 47.1
AT4G03205 Arabidopsis thaliana HOM05D000161 ORTHO05D005857 7.0e-75 285.8 222 65.8
Haze_26605 Corylus avellana HOM05D000161 ORTHO05D005857 3.0e-65 253.8 441 34.5
PSO339G2005 Papaver somniferum HOM05D000161 ORTHO05D005857 3.3e-64 250.4 129 89.9
arahy.Tifrunner.gnm1.ann1.I5BL8A Arachis hypogaea HOM05D000161 ORTHO05D005857 1.1e-54 218.8 188 60.1
CBR_g23778 Chara braunii HOM05D000161 ORTHO05D005857 5.8e-45 186.4 462 29.2
AagrBONN_evm.TU.Sc2ySwM_228.3299 Anthoceros agrestis HOM05D000161 ORTHO05D005857 7.6e-45 186.0 471 28.9
MCO09G037 Micromonas commoda HOM05D000161 ORTHO05D005857 9.9e-45 185.7 463 28.9
Mapoly0070s0075 Marchantia polymorpha HOM05D000161 ORTHO05D005857 6.4e-44 183.0 473 27.9
Hma1.2p1_2159F.1_g315510 Hydrangea macrophylla HOM05D000161 ORTHO05D005857 1.6e-42 178.3 147 64.6
Pp3c15_4200 Physcomitrium patens HOM05D000161 ORTHO05D005857 1.6e-42 178.3 476 27.5
arahy.Tifrunner.gnm1.ann1.0Q00UB Arachis hypogaea HOM05D000235 ORTHO05D000147 3.9e-41 173.7 172 55.2
Cre02.g092600 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D005857 1.5e-37 161.8 463 27.0
PRCOL_00006910 Prasinoderma coloniale HOM05D000161 ORTHO05D005857 1.2e-34 152.1 479 27.3
SEGI_02394 Sequoiadendron giganteum HOM05D000161 ORTHO05D005857 4.3e-32 143.7 339 29.2
arahy.Tifrunner.gnm1.ann1.F4AYRR Arachis hypogaea HOM05D000161 ORTHO05D005857 2.4e-27 127.9 90 66.7
SHI00986 Sapria himalayana HOM05D000161 ORTHO05D005857 5.5e-27 126.7 74 78.4
arahy.Tifrunner.gnm1.ann1.0Z8MR5 Arachis hypogaea HOM05D000161 ORTHO05D003903 9.3e-19 99.4 61 75.4
CARHR251640 Cardamine hirsuta HOM05D000161 ORTHO05D116224 1.6e-15 88.6 80 56.2
arahy.Tifrunner.gnm1.ann1.6HI1EE Arachis hypogaea HOM05D000161 ORTHO05D005857 8.2e-15 86.3 49 77.6
CAN.G129.44 Capsicum annuum HOM05D000161 ORTHO05D005857 2.4e-14 84.7 69 68.1
RcHm_v2.0_Chr6g0298511 Rosa chinensis HOM05D000161 ORTHO05D340689 5.0e-12 77.0 166 37.3
CARHR251650 Cardamine hirsuta HOM05D000161 ORTHO05D115956 4.2e-11 73.9 70 57.1
arahy.Tifrunner.gnm1.ann1.1EXH41 Arachis hypogaea HOM05D000161 ORTHO05D003770 1.6e-10 72.0 33 87.9
arahy.Tifrunner.gnm1.ann1.DD88BD Arachis hypogaea HOM05D000161 ORTHO05D086871 2.0e-08 65.1 34 76.5
QL05p043498 Quercus lobata HOM05D020871 ORTHO05D337541 1.3e-07 62.4 31 80.6
HanXRQChr08g0215991 Helianthus annuus HOM05D033391 ORTHO05D220840 5.3e-06 57.0 27 85.2
HanXRQChr11g0343191 Helianthus annuus HOM05D033391 ORTHO05D220967 9.1e-06 56.2 25 92.0


User provided reference genes

Program Settings