Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006731.1 Olea europaea HOM05D001392 ORTHO05D014305 2.6e-53 211.8 113 100.0
Oeu006734.3 Olea europaea HOM05D001392 ORTHO05D003370 3.1e-46 188.3 103 98.1
MSTRG.26714 Avicennia marina HOM05D001392 ORTHO05D003370 3.2e-35 151.8 99 79.8
Oeu022370.1 Olea europaea HOM05D001392 ORTHO05D003370 5.7e-32 141.0 106 76.4
Actinidia34544 Actinidia chinensis HOM05D001392 ORTHO05D003370 1.7e-31 139.4 98 72.4
Dinv36391 Davidia involucrata HOM05D001392 ORTHO05D003370 1.1e-30 136.7 111 67.6
Migut.J00558 Erythranthe guttata HOM05D001392 ORTHO05D003370 7.0e-30 134.0 99 72.7
GSVIVG01010632001 Vitis vinifera HOM05D001392 ORTHO05D003370 9.2e-30 133.7 98 70.4
SGA_v2.0_scaffold35G14149 Striga asiatica HOM05D001392 ORTHO05D003370 2.0e-29 132.5 103 68.9
Actinidia34075 Actinidia chinensis HOM05D001392 ORTHO05D003370 3.5e-29 131.7 98 67.3
CSS0006913 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D003370 3.5e-29 131.7 111 64.0
CSS0026523 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D003370 3.5e-29 131.7 111 64.0
CSS0030571 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D003370 3.5e-29 131.7 111 64.0
unitig_744.g24676 Utricularia gibba HOM05D001392 ORTHO05D003370 3.5e-29 131.7 99 69.7
Cc06_g03770 Coffea canephora HOM05D001392 ORTHO05D003370 6.6e-28 127.5 98 67.3
vmacro06729 Vaccinium macrocarpon HOM05D001392 ORTHO05D014305 8.6e-28 127.1 98 66.3
QL09p015520 Quercus lobata HOM05D001392 ORTHO05D003370 9.5e-27 123.6 105 57.1
Sc07g0001630 Simmondsia chinensis HOM05D001392 ORTHO05D003370 1.2e-26 123.2 97 66.0
Dinv31233 Davidia involucrata HOM05D001392 ORTHO05D003370 8.0e-26 120.6 97 63.9
DCAR_020225 Daucus carota HOM05D001392 ORTHO05D003370 1.0e-25 120.2 105 57.1
CiPaw.04G068200 Carya illinoinensis HOM05D001392 ORTHO05D003370 2.3e-25 119.0 104 55.8
HanXRQChr14g0461381 Helianthus annuus HOM05D001392 ORTHO05D003370 3.0e-25 118.6 103 60.2
Cfa008272 Carpinus fangiana HOM05D001392 ORTHO05D003370 1.5e-24 116.3 104 57.7
Haze_13765 Corylus avellana HOM05D001392 ORTHO05D014305 1.5e-24 116.3 103 58.3
Lsat_1_v5_gn_7_60741 Lactuca sativa HOM05D001392 ORTHO05D003370 1.5e-24 116.3 100 60.0
Lsat_1_v5_gn_5_61861 Lactuca sativa HOM05D001392 ORTHO05D003370 2.6e-24 115.5 100 59.0
Lj9C302G3 Lonicera japonica HOM05D001392 ORTHO05D003370 2.6e-24 115.5 98 63.3
HanXRQChr03g0071441 Helianthus annuus HOM05D001392 ORTHO05D003370 3.4e-24 115.2 103 60.2
SGA_v2.0_scaffold452G51847 Striga asiatica HOM05D001392 ORTHO05D014305 4.4e-24 114.8 77 74.0
Lsat_1_v5_gn_7_60720 Lactuca sativa HOM05D001392 ORTHO05D003370 5.7e-24 114.4 100 59.0
MBI18_g01867_MAGBIO Magnolia biondii HOM05D001392 ORTHO05D003370 1.7e-23 112.8 99 57.6
Gohir.A08G018000 Gossypium hirsutum HOM05D001392 ORTHO05D003370 1.1e-22 110.2 104 54.8
Sed0018333 Sechium edule HOM05D001392 ORTHO05D003370 1.4e-22 109.8 97 56.7
Ah.03g134560 Amaranthus hybridus HOM05D001392 ORTHO05D003370 1.8e-22 109.4 97 56.7
Gohir.D08G028600 Gossypium hirsutum HOM05D001392 ORTHO05D003370 4.1e-22 108.2 104 53.8
Gorai.004G025700 Gossypium raimondii HOM05D001392 ORTHO05D003370 4.1e-22 108.2 104 53.8
CsaV3_5G005900 Cucumis sativus L. HOM05D001392 ORTHO05D003370 7.0e-22 107.5 92 60.9
TAR375G1057 Trochodendron aralioides HOM05D001392 ORTHO05D003370 7.0e-22 107.5 98 58.2
MELO3C005366.2 Cucumis melo HOM05D001392 ORTHO05D003370 9.2e-22 107.1 97 56.7
CANSAT56G1922 Cannabis sativa HOM05D001392 ORTHO05D003370 2.7e-21 105.5 97 56.7
Duzib170G0790 Durio zibethinus HOM05D001392 ORTHO05D003370 2.7e-21 105.5 97 53.6
COL.COLO4_31125 Corchorus olitorius HOM05D001392 ORTHO05D003370 3.5e-21 105.1 97 54.6
Hund20713 Selenicereus undatus HOM05D001392 ORTHO05D003370 3.5e-21 105.1 85 62.4
COL.COLO4_25471 Corchorus olitorius HOM05D001392 ORTHO05D003370 5.9e-21 104.4 97 52.6
Eucgr.F04425 Eucalyptus grandis HOM05D001392 ORTHO05D003370 5.9e-21 104.4 103 51.5
Thecc.09G180600 Theobroma cacao HOM05D001392 ORTHO05D003370 7.8e-21 104.0 97 54.6
Cpa.g.sc2.74 Carica papaya HOM05D001392 ORTHO05D003370 1.7e-20 102.8 97 50.5
ECA240G2105 Erigeron canadensis HOM05D001392 ORTHO05D003370 1.7e-20 102.8 105 53.3
Potri.007G004100 Populus trichocarpa HOM05D001392 ORTHO05D003370 1.7e-20 102.8 97 50.5
CANSAT56G2795 Cannabis sativa HOM05D001392 ORTHO05D014305 2.3e-20 102.4 97 55.7
ATR0782G056 Amborella trichopoda HOM05D001392 ORTHO05D003370 8.6e-20 100.5 104 51.9
EL10Ac8g19565 Beta vulgaris HOM05D001392 ORTHO05D003370 8.6e-20 100.5 97 54.6
MD07G1262800 Malus domestica HOM05D001392 ORTHO05D003370 8.6e-20 100.5 105 51.4
ClCG01G005680 Citrullus lanatus HOM05D001392 ORTHO05D003370 1.1e-19 100.1 97 53.6
FvH4_7g28940 Fragaria vesca HOM05D001392 ORTHO05D003370 1.5e-19 99.8 107 50.5
FAN06G3456 Fragaria x ananassa HOM05D001392 ORTHO05D003370 1.5e-19 99.8 107 50.5
FAN06G3412 Fragaria x ananassa HOM05D001392 ORTHO05D003370 1.9e-19 99.4 107 50.5
Prupe.2G289400 Prunus persica HOM05D001392 ORTHO05D003370 1.9e-19 99.4 97 53.6
RcHm_v2.0_Chr1g0376611 Rosa chinensis HOM05D001392 ORTHO05D003370 3.3e-19 98.6 104 48.1
FAN03G1076 Fragaria x ananassa HOM05D001392 ORTHO05D003370 4.3e-19 98.2 107 49.5
FAN03G1857 Fragaria x ananassa HOM05D001392 ORTHO05D003370 4.3e-19 98.2 107 49.5
FAN10G1869 Fragaria x ananassa HOM05D001392 ORTHO05D003370 4.3e-19 98.2 107 49.5
MD01G1196000 Malus domestica HOM05D001392 ORTHO05D003370 4.3e-19 98.2 106 49.1
Eucgr.E01106 Eucalyptus grandis HOM05D001392 ORTHO05D003370 1.2e-18 96.7 97 50.5
BolC3t19544H Brassica oleracea HOM05D001392 ORTHO05D003370 3.6e-18 95.1 97 50.5
Sp1g12970 Schrenkiella parvula HOM05D001392 ORTHO05D003370 4.7e-18 94.7 99 49.5
THA.LOC104824111 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 4.7e-18 94.7 94 52.1
BcaC07g41556 Brassica carinata HOM05D001392 ORTHO05D003370 6.2e-18 94.4 97 49.5
C08p45570 Brassica napus HOM05D001392 ORTHO05D003370 6.2e-18 94.4 97 49.5
BolC8t52110H Brassica oleracea HOM05D001392 ORTHO05D003370 6.2e-18 94.4 97 49.5
Os03g0694900 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D003370 6.2e-18 94.4 103 45.6
SEGI_04262 Sequoiadendron giganteum HOM05D001392 ORTHO05D003370 1.1e-17 93.6 104 47.1
A09p61990 Brassica napus HOM05D001392 ORTHO05D003370 1.4e-17 93.2 97 48.5
BraA09t41562Z Brassica rapa HOM05D001392 ORTHO05D003370 1.4e-17 93.2 95 49.5
BraA08t35113Z Brassica rapa HOM05D001392 ORTHO05D003370 1.8e-17 92.8 106 47.2
Carub.0001s1437 Capsella rubella HOM05D001392 ORTHO05D003370 1.8e-17 92.8 98 50.0
AUR62002803 Chenopodium quinoa HOM05D001392 ORTHO05D003370 1.8e-17 92.8 98 49.0
AUR62014110 Chenopodium quinoa HOM05D001392 ORTHO05D003370 2.3e-17 92.4 98 49.0
AUR62014114 Chenopodium quinoa HOM05D001392 ORTHO05D003370 2.3e-17 92.4 98 51.0
Thhalv10006628m.g Eutrema salsugineum HOM05D001392 ORTHO05D003370 2.3e-17 92.4 97 48.5
Peaxi162Scf00254g00012 Petunia axillaris HOM05D001392 ORTHO05D003370 2.3e-17 92.4 99 53.5
THA.LOC104805109 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 2.3e-17 92.4 97 48.5
BcaB02g06531 Brassica carinata HOM05D001392 ORTHO05D003370 5.2e-17 91.3 96 49.0
A06p10670 Brassica napus HOM05D001392 ORTHO05D003370 6.8e-17 90.9 98 48.0
BraA06t24247Z Brassica rapa HOM05D001392 ORTHO05D003370 6.8e-17 90.9 98 48.0
CAN.G1091.5 Capsicum annuum HOM05D001392 ORTHO05D003370 6.8e-17 90.9 99 55.6
BcaC07g38749 Brassica carinata HOM05D001392 ORTHO05D003370 1.2e-16 90.1 104 48.1
BcaNung05660 Brassica carinata HOM05D001392 ORTHO05D003370 1.2e-16 90.1 104 48.1
Manes.09G005800 Manihot esculenta HOM05D001392 ORTHO05D003370 1.2e-16 90.1 97 44.3
BcaC05g25377 Brassica carinata HOM05D001392 ORTHO05D003370 1.5e-16 89.7 100 48.0
C08p16790 Brassica napus HOM05D001392 ORTHO05D003370 1.5e-16 89.7 104 48.1
BolC8t49300H Brassica oleracea HOM05D001392 ORTHO05D003370 1.5e-16 89.7 104 48.1
TWI81G0741 Tripterygium wilfordii HOM05D001392 ORTHO05D003370 1.5e-16 89.7 104 45.2
Peaxi162Scf00182g00085 Petunia axillaris HOM05D001392 ORTHO05D003370 2.0e-16 89.4 98 51.0
CARHR015110 Cardamine hirsuta HOM05D001392 ORTHO05D003370 2.6e-16 89.0 102 44.1
C05p12580 Brassica napus HOM05D001392 ORTHO05D003370 3.4e-16 88.6 100 48.0
BolC5t30002H Brassica oleracea HOM05D001392 ORTHO05D003370 3.4e-16 88.6 100 48.0
PGR031G3606 Punica granatum HOM05D001392 ORTHO05D003370 3.4e-16 88.6 97 46.4
AL1G26580 Arabidopsis lyrata HOM05D001392 ORTHO05D003370 5.8e-16 87.8 98 46.9
AT1G14610 Arabidopsis thaliana HOM05D001392 ORTHO05D003370 5.8e-16 87.8 98 46.9
Nitab4.5_0000669g0060 Nicotiana tabacum HOM05D001392 ORTHO05D003370 5.8e-16 87.8 99 51.5
BcaB03g13091 Brassica carinata HOM05D001392 ORTHO05D003370 9.8e-16 87.0 102 46.1
A08p31910 Brassica napus HOM05D001392 ORTHO05D003370 1.3e-15 86.7 99 48.5
Os10g0506200 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D003370 1.3e-15 86.7 97 44.3
Carub.0001s3391 Capsella rubella HOM05D001392 ORTHO05D003370 2.2e-15 85.9 89 50.6
CDE08G1587 Ceratophyllum demersum HOM05D001392 ORTHO05D003370 2.2e-15 85.9 86 47.7
Nitab4.5_0008025g0020 Nicotiana tabacum HOM05D001392 ORTHO05D003370 2.2e-15 85.9 99 50.5
Potri.005G087850 Populus trichocarpa HOM05D001392 ORTHO05D003370 2.2e-15 85.9 97 46.4
TWI15G0272 Tripterygium wilfordii HOM05D001392 ORTHO05D003370 2.2e-15 85.9 104 42.3
Zm00001eb415220 Zea mays HOM05D001392 ORTHO05D003370 2.2e-15 85.9 97 43.3
Zm00001eb104290 Zea mays HOM05D001392 ORTHO05D003370 2.9e-15 85.5 97 43.3
Aa31LG1G460 Aethionema arabicum HOM05D001392 ORTHO05D003370 6.4e-15 84.3 97 43.3
Thhalv10006653m.g Eutrema salsugineum HOM05D001392 ORTHO05D003370 8.3e-15 84.0 79 57.0
Mapoly0132s0012 Marchantia polymorpha HOM05D001392 ORTHO05D003370 8.3e-15 84.0 98 41.8
PSO478G1977 Papaver somniferum HOM05D001392 ORTHO05D003370 8.3e-15 84.0 101 45.5
PSO782G2668 Papaver somniferum HOM05D001392 ORTHO05D003370 8.3e-15 84.0 101 46.5
Solyc09g007540.3 Solanum lycopersicum HOM05D001392 ORTHO05D003370 8.3e-15 84.0 99 50.5
Sopen09g002410 Solanum pennellii HOM05D001392 ORTHO05D003370 8.3e-15 84.0 99 50.5
Aqoxy7G00465 Aquilegia oxysepala HOM05D001392 ORTHO05D003370 1.1e-14 83.6 104 45.2
EL10Ac5g11700 Beta vulgaris HOM05D001392 ORTHO05D003370 1.1e-14 83.6 135 40.0
Sabra07G0003000 Salix brachista HOM05D001392 ORTHO05D003370 2.4e-14 82.4 138 35.5
Aqoxy2G03097 Aquilegia oxysepala HOM05D001392 ORTHO05D003370 4.1e-14 81.6 104 44.2
A08p27330 Brassica napus HOM05D001392 ORTHO05D003370 5.4e-14 81.3 97 45.4
BraA08t34676Z Brassica rapa HOM05D001392 ORTHO05D003370 5.4e-14 81.3 97 45.4
Pp3c2_9830 Physcomitrium patens HOM05D001392 ORTHO05D003370 5.4e-14 81.3 98 41.8
Peaxi162Scf00079g00089 Petunia axillaris HOM05D001392 ORTHO05D003370 3.5e-13 78.6 92 47.8
SHI28861 Sapria himalayana HOM05D001392 ORTHO05D003370 3.5e-13 78.6 103 40.8
BcaC06g34238 Brassica carinata HOM05D001392 ORTHO05D032327 6.0e-13 77.8 88 45.5
Migut.L01675 Erythranthe guttata HOM05D001392 ORTHO05D003370 6.0e-13 77.8 49 77.6
CARHR024700 Cardamine hirsuta HOM05D001392 ORTHO05D003370 1.0e-12 77.0 88 46.6
arahy.Tifrunner.gnm1.ann1.R98RGQ Arachis hypogaea HOM05D001392 ORTHO05D003370 1.7e-12 76.3 92 51.1
AagrBONN_evm.TU.Sc2ySwM_228.4580 Anthoceros agrestis HOM05D001392 ORTHO05D003370 2.3e-12 75.9 97 42.3
arahy.Tifrunner.gnm1.ann1.K04UQ8 Arachis hypogaea HOM05D001392 ORTHO05D003370 2.3e-12 75.9 92 51.1
Psat6g201440 Pisum sativum HOM05D001392 ORTHO05D003370 3.0e-12 75.5 92 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3387 Anthoceros agrestis HOM05D001392 ORTHO05D003370 5.0e-12 74.7 97 42.3
Haze_10572 Corylus avellana HOM05D001392 ORTHO05D014305 5.0e-12 74.7 65 56.9
BolC4t25700H Brassica oleracea HOM05D003550 ORTHO05D032327 6.6e-12 74.3 98 41.8
CARHR260940 Cardamine hirsuta HOM05D001392 ORTHO05D003370 6.6e-12 74.3 104 41.3
BcaC06g35086 Brassica carinata HOM05D001392 ORTHO05D003370 1.5e-11 73.2 80 50.0
C04p41180 Brassica napus HOM05D003550 ORTHO05D032327 1.5e-11 73.2 88 45.5
C07p20010 Brassica napus HOM05D001392 ORTHO05D003370 1.5e-11 73.2 96 46.9
BolC7t42520H Brassica oleracea HOM05D001392 ORTHO05D003370 1.5e-11 73.2 80 50.0
HPP92_001074 Vanilla planifolia HOM05D001392 ORTHO05D003370 1.9e-11 72.8 102 41.2
VMungo0720G1540 Vigna mungo HOM05D001392 ORTHO05D003370 2.5e-11 72.4 96 46.9
MCO07G752 Micromonas commoda HOM05D001392 ORTHO05D003370 3.3e-11 72.0 99 39.4
Phvul.007G066400 Phaseolus vulgaris HOM05D001392 ORTHO05D003370 3.3e-11 72.0 92 47.8
Ciclev10004208m.g Citrus clementina HOM05D001392 ORTHO05D003370 9.5e-11 70.5 96 44.8
Lalb_Chr12g0210011 Lupinus albus HOM05D001392 ORTHO05D003370 9.5e-11 70.5 93 48.4
Zm00001eb345100 Zea mays HOM05D000325 ORTHO05D014305 1.2e-10 70.1 91 44.0
Ca_10801_v3 Cicer arietinum L. HOM05D001392 ORTHO05D003370 2.1e-10 69.3 96 44.8
A07p13390 Brassica napus HOM05D001392 ORTHO05D003370 2.8e-10 68.9 73 50.7
CBR_g31285 Chara braunii HOM05D001392 ORTHO05D003370 3.6e-10 68.6 82 43.9
Hund20715 Selenicereus undatus HOM05D001392 ORTHO05D003370 3.6e-10 68.6 49 67.3
Glyma.10G239500 Glycine max HOM05D001392 ORTHO05D003370 1.4e-09 66.6 82 50.0
LjContig00238g0000416 Lotus japonicus HOM05D001392 ORTHO05D003370 8.9e-09 63.9 95 45.3
TPR.G34728 Trifolium pratense HOM05D001392 ORTHO05D003370 3.4e-08 62.0 93 44.1
Migut.J00692 Erythranthe guttata HOM05D001392 ORTHO05D003370 5.8e-08 61.2 52 59.6
QL06p044842 Quercus lobata HOM05D001392 ORTHO05D014305 9.9e-08 60.5 82 46.3
Prupe.1G576900 Prunus persica HOM05D001392 ORTHO05D003370 1.7e-07 59.7 95 43.2
RcHm_v2.0_Chr7g0218411 Rosa chinensis HOM05D001392 ORTHO05D003370 6.4e-07 57.8 86 38.4
SMO358G0706 Selaginella moellendorffii HOM05D001392 ORTHO05D003370 1.9e-06 56.2 99 30.3
MD17G1256800 Malus domestica HOM05D001392 ORTHO05D003370 2.4e-06 55.8 91 38.5


User provided reference genes

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