Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006718.2 Olea europaea HOM05D003979 ORTHO05D005530 1.4e-81 306.2 155 100.0
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 3.3e-46 188.7 252 49.2
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 7.3e-46 187.6 252 48.8
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 9.6e-46 187.2 252 48.4
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 9.6e-46 187.2 249 49.0
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 4.8e-45 184.9 252 48.4
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 8.1e-45 184.1 252 47.6
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 8.1e-45 184.1 251 48.6
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 8.1e-45 184.1 252 47.6
unitig_899.g15534 Utricularia gibba HOM05D003979 ORTHO05D005530 1.4e-44 183.3 106 87.7
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.8e-44 183.0 251 47.8
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.8e-44 183.0 251 47.8
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 1.8e-44 183.0 252 47.6
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 2.4e-44 182.6 251 47.8
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 2.4e-44 182.6 251 47.8
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 3.1e-44 182.2 252 47.2
SGA_v2.0_scaffold31G12595 Striga asiatica HOM05D003979 ORTHO05D005530 4.0e-44 181.8 106 88.7
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 5.3e-44 181.4 228 49.6
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 1.2e-43 180.3 106 86.8
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 1.2e-43 180.3 251 46.2
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 1.2e-43 180.3 238 48.7
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 1.2e-43 180.3 252 47.6
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 1.2e-43 180.3 252 47.6
CDE04G1626 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 1.5e-43 179.9 252 46.8
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 1.5e-43 179.9 252 46.4
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 2.0e-43 179.5 109 84.4
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 2.6e-43 179.1 109 84.4
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 2.6e-43 179.1 252 46.0
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 3.4e-43 178.7 109 84.4
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 3.4e-43 178.7 112 83.0
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 3.4e-43 178.7 109 84.4
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 3.4e-43 178.7 109 84.4
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 4.4e-43 178.3 251 45.8
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 5.8e-43 177.9 251 46.2
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 5.8e-43 177.9 252 47.2
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 7.6e-43 177.6 249 46.6
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 9.9e-43 177.2 249 46.6
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 9.9e-43 177.2 249 46.6
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 9.9e-43 177.2 249 46.6
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 9.9e-43 177.2 252 46.8
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 9.9e-43 177.2 252 46.8
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 1.3e-42 176.8 252 46.4
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 1.7e-42 176.4 252 46.4
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 1.7e-42 176.4 104 85.6
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 1.7e-42 176.4 105 85.7
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 2.2e-42 176.0 251 45.8
GSVIVG01029073001 Vitis vinifera HOM05D003979 ORTHO05D005530 2.2e-42 176.0 252 46.8
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 2.9e-42 175.6 252 46.8
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 2.9e-42 175.6 251 46.2
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 2.9e-42 175.6 105 83.8
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 2.9e-42 175.6 251 45.8
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 3.8e-42 175.3 251 46.6
Gohir.A10G121600 Gossypium hirsutum HOM05D003979 ORTHO05D005530 3.8e-42 175.3 252 46.4
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 3.8e-42 175.3 251 45.8
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 4.9e-42 174.9 107 83.2
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 4.9e-42 174.9 251 45.4
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 6.4e-42 174.5 251 46.6
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 6.4e-42 174.5 250 46.8
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 6.4e-42 174.5 251 46.6
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 6.4e-42 174.5 251 46.2
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 6.4e-42 174.5 251 46.2
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 6.4e-42 174.5 105 84.8
HPP92_025731 Vanilla planifolia HOM05D003979 ORTHO05D005530 6.4e-42 174.5 241 46.5
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 8.4e-42 174.1 111 81.1
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 8.4e-42 174.1 111 81.1
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 8.4e-42 174.1 251 45.8
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 8.4e-42 174.1 251 45.8
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 8.4e-42 174.1 252 46.0
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 8.4e-42 174.1 251 46.2
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 8.4e-42 174.1 111 81.1
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 8.4e-42 174.1 106 84.0
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 8.4e-42 174.1 106 84.0
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 1.1e-41 173.7 106 83.0
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 1.1e-41 173.7 252 46.0
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 1.4e-41 173.3 106 82.1
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 1.4e-41 173.3 105 83.8
HPP92_025735 Vanilla planifolia HOM05D003979 ORTHO05D005530 1.9e-41 172.9 240 46.2
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 2.4e-41 172.6 104 85.6
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 2.4e-41 172.6 251 44.6
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 2.4e-41 172.6 252 45.6
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 2.4e-41 172.6 108 82.4
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 2.4e-41 172.6 251 45.0
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 3.2e-41 172.2 251 45.4
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 3.2e-41 172.2 250 45.6
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 3.2e-41 172.2 252 45.2
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 3.2e-41 172.2 105 83.8
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 4.2e-41 171.8 107 81.3
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 4.2e-41 171.8 105 82.9
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 4.2e-41 171.8 250 45.6
THA.LOC104809102 Tarenaya hassleriana HOM05D003979 ORTHO05D049433 5.4e-41 171.4 103 85.4
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 7.1e-41 171.0 250 45.2
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 7.1e-41 171.0 250 45.2
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 7.1e-41 171.0 107 82.2
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 9.3e-41 170.6 250 45.2
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 9.3e-41 170.6 251 46.2
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 9.3e-41 170.6 251 45.8
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 1.2e-40 170.2 251 45.4
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 1.2e-40 170.2 251 44.6
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 1.2e-40 170.2 105 81.9
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 1.6e-40 169.9 250 45.2
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 1.6e-40 169.9 105 81.9
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 1.6e-40 169.9 106 82.1
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 2.7e-40 169.1 107 81.3
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 2.7e-40 169.1 251 45.0
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 3.5e-40 168.7 107 80.4
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 3.5e-40 168.7 111 78.4
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 3.5e-40 168.7 250 44.8
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 3.5e-40 168.7 251 45.4
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 4.6e-40 168.3 108 80.6
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 6.0e-40 167.9 252 45.2
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 6.0e-40 167.9 108 79.6
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 6.0e-40 167.9 108 79.6
HPP92_025762 Vanilla planifolia HOM05D003979 ORTHO05D005530 6.0e-40 167.9 250 44.4
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 7.8e-40 167.5 104 81.7
Eucgr.H02826 Eucalyptus grandis HOM05D003979 ORTHO05D005530 7.8e-40 167.5 105 81.9
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 7.8e-40 167.5 107 80.4
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 7.8e-40 167.5 107 80.4
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 7.8e-40 167.5 251 44.6
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.0e-39 167.2 252 44.8
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 1.0e-39 167.2 251 45.0
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 2.3e-39 166.0 106 79.2
SEGI_04002 Sequoiadendron giganteum HOM05D003979 ORTHO05D005530 5.1e-39 164.9 252 44.0
Oeu022341.1 Olea europaea HOM05D003979 ORTHO05D049433 8.7e-39 164.1 115 76.5
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 1.5e-38 163.3 252 42.9
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 1.5e-38 163.3 252 42.9
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 1.9e-38 162.9 252 43.3
Atru.chr4.1774 Acer truncatum HOM05D003979 ORTHO05D005530 3.3e-38 162.2 105 81.0
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 3.3e-38 162.2 251 43.8
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 9.6e-38 160.6 231 44.6
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 1.2e-35 153.7 250 40.8
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 1.5e-35 153.3 106 70.8
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 2.9e-34 149.1 104 71.2
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 1.8e-31 139.8 106 67.9
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 2.5e-30 136.0 105 65.7
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 1.3e-26 123.6 218 41.7
Cfa024863 Carpinus fangiana HOM05D003979 ORTHO05D005530 5.5e-25 118.2 102 58.8
Eucgr.C02488 Eucalyptus grandis HOM05D003979 ORTHO05D005530 1.1e-22 110.5 74 78.4
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 9.0e-20 100.9 101 52.5
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 4.2e-17 92.0 184 37.0
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 3.9e-15 85.5 48 83.3
Cfa023448 Carpinus fangiana HOM05D003979 ORTHO05D123299 1.8e-07 60.1 102 39.2


User provided reference genes

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