Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 0.0e+00 1075.8 534 100.0
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 5.8e-292 1006.9 607 85.5
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 3.6e-278 961.1 532 88.2
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 4.6e-273 944.1 522 86.8
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 5.1e-272 940.6 525 87.6
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 7.4e-271 936.8 530 84.9
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 2.1e-270 935.3 531 85.5
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 8.1e-270 933.3 532 85.7
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 1.1e-269 932.9 532 84.4
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 1.1e-269 932.9 531 85.3
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 4.0e-269 931.0 527 85.8
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 1.2e-268 929.5 525 85.1
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 1.5e-268 929.1 532 84.6
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 7.6e-268 926.8 527 85.6
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 1.3e-267 926.0 525 85.0
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 3.8e-267 924.5 532 84.6
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 4.9e-267 924.1 517 85.9
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 1.1e-266 922.9 532 84.4
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 7.1e-266 920.2 541 83.5
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 1.2e-265 919.5 526 84.8
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 6.0e-265 917.1 532 83.3
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 1.0e-264 916.4 533 82.6
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 1.3e-264 916.0 531 83.8
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 6.7e-264 913.7 532 84.0
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 2.5e-263 911.8 532 82.9
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 5.6e-263 910.6 536 83.6
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 5.6e-263 910.6 532 83.5
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 7.4e-263 910.2 510 86.3
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 1.6e-262 909.1 533 83.3
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 1.6e-262 909.1 530 83.8
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 1.6e-262 909.1 534 83.0
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 3.7e-262 907.9 527 83.7
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 4.8e-262 907.5 530 83.8
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 4.8e-262 907.5 530 81.9
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 1.4e-261 906.0 536 83.0
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 2.4e-261 905.2 527 83.1
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 4.0e-261 904.4 533 82.4
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 5.3e-261 904.0 530 83.2
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 6.9e-261 903.7 532 83.3
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 9.0e-261 903.3 513 85.4
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 1.5e-260 902.5 531 82.9
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 2.6e-260 901.7 532 82.5
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 2.6e-260 901.7 533 82.2
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 5.8e-260 900.6 528 83.9
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 1.0e-259 899.8 507 85.4
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 1.7e-259 899.0 513 85.2
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 2.2e-259 898.7 532 82.1
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 3.8e-259 897.9 531 81.2
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 8.4e-259 896.7 552 80.4
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 8.4e-259 896.7 566 78.6
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 2.5e-258 895.2 532 81.4
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 7.1e-258 893.6 562 78.8
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 7.1e-258 893.6 504 86.1
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 9.3e-258 893.3 519 82.9
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 2.1e-257 892.1 530 82.1
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 7.9e-257 890.2 513 85.0
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 1.0e-256 889.8 526 81.2
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 1.3e-256 889.4 523 82.2
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 1.3e-256 889.4 567 78.7
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 3.0e-256 888.3 526 82.1
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 8.7e-256 886.7 562 78.3
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 3.3e-255 884.8 523 81.8
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 4.3e-255 884.4 562 78.3
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 9.7e-255 883.2 526 81.4
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 9.7e-255 883.2 501 85.0
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 1.3e-254 882.9 526 81.6
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 1.3e-254 882.9 532 81.6
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 3.7e-254 881.3 519 81.7
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 6.3e-254 880.6 571 77.6
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 1.1e-253 879.8 534 81.3
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 1.1e-253 879.8 534 81.3
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 1.1e-253 879.8 532 81.0
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 1.4e-253 879.4 526 80.8
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 1.4e-253 879.4 519 82.1
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 9.0e-253 876.7 526 80.8
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 7.6e-252 873.6 530 79.6
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 2.2e-251 872.1 544 78.9
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 2.2e-251 872.1 520 81.2
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 1.1e-250 869.8 519 80.7
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 1.9e-250 869.0 586 74.2
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 1.9e-250 869.0 586 74.2
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 2.7e-249 865.1 516 82.6
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 1.8e-248 862.4 524 78.6
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 3.9e-248 861.3 534 78.7
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 1.0e-243 846.7 539 78.7
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 2.8e-238 828.6 530 77.0
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 5.2e-232 807.7 532 75.2
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 2.8e-230 802.0 530 75.8
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 1.8e-224 782.7 505 75.0
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 2.8e-222 775.4 588 68.5
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 1.2e-220 770.0 468 81.2
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 4.5e-220 768.1 502 73.1
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 7.5e-215 750.7 504 75.0
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 1.8e-213 746.1 503 72.6
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 7.5e-207 724.2 482 72.4
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 1.3e-195 686.8 504 67.5
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 5.0e-195 684.9 365 90.4
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 7.3e-194 681.0 370 88.6
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.6e-191 672.5 365 87.9
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 2.7e-188 662.5 537 62.4
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 1.7e-182 643.3 398 79.6
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 4.6e-180 635.2 408 76.0
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 1.2e-177 627.1 516 62.2
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 1.2e-177 627.1 352 85.8
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 1.9e-170 603.2 308 92.5
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 1.8e-168 596.7 401 72.8
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.1e-165 587.4 308 90.6
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 1.4e-136 490.7 447 60.2
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 1.7e-129 467.2 266 83.5
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 4.2e-125 452.6 267 83.9
BolC8t48115H Brassica oleracea HOM05D005018 ORTHO05D006786 2.9e-110 403.3 379 58.3
Haze_25310 Corylus avellana HOM05D005018 ORTHO05D006786 5.0e-110 402.5 371 60.6
BcaC07g37734 Brassica carinata HOM05D005018 ORTHO05D006786 8.3e-97 358.6 334 57.8
Ciclev10002140m.g Citrus clementina HOM05D005018 ORTHO05D006786 1.3e-94 351.3 227 77.1
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 1.9e-93 347.4 509 38.9
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 5.5e-93 345.9 465 41.1
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 2.1e-84 317.4 161 90.7
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 1.7e-81 307.8 532 38.9
Cpa.g.sc1441.1 Carica papaya HOM05D005018 ORTHO05D006786 1.2e-76 291.6 169 85.8
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 2.9e-73 280.4 161 81.4
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 7.8e-71 272.3 330 46.7
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 2.6e-58 230.7 162 66.7
SEGI_07875 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 3.5e-55 220.3 214 51.4
Haze_25306 Corylus avellana HOM05D005018 ORTHO05D000965 4.5e-42 176.8 114 76.3
Zm00001eb292630 Zea mays HOM05D005018 ORTHO05D006786 2.6e-34 151.0 112 63.4
Zm00001eb074000 Zea mays HOM05D005018 ORTHO05D006786 6.5e-33 146.4 95 70.5
Lsat_1_v5_gn_8_7740 Lactuca sativa HOM05D005018 ORTHO05D006786 6.0e-31 139.8 71 84.5
Cpa.g.sc1441.2 Carica papaya HOM05D005018 ORTHO05D006786 7.4e-29 132.9 95 72.6
Haze_18314 Corylus avellana HOM05D005018 ORTHO05D006786 7.4e-29 132.9 139 53.2
CDE08G0903 Ceratophyllum demersum HOM05D005018 ORTHO05D006786 5.8e-26 123.2 88 71.6
Ah.06g190940 Amaranthus hybridus HOM05D005018 ORTHO05D006786 1.0e-25 122.5 94 64.9
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 3.1e-19 100.9 146 43.8
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 2.6e-18 97.8 73 63.0
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 7.7e-18 96.3 63 73.0
HanXRQChr09g0246051 Helianthus annuus HOM05D005018 ORTHO05D006171 1.9e-16 91.7 47 78.7
HanXRQChr10g0278491 Helianthus annuus HOM05D005018 ORTHO05D006786 4.6e-15 87.0 48 77.1
C09p47090 Brassica napus HOM05D036241 ORTHO05D032846 1.1e-13 82.4 77 54.5


User provided reference genes

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