Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001605.1 Olea europaea HOM05D003481 ORTHO05D004001 2.9e-64 248.4 129 100.0
Oeu008973.2 Olea europaea HOM05D003481 ORTHO05D004001 4.0e-29 131.7 129 61.2
Migut.H01305 Erythranthe guttata HOM05D003481 ORTHO05D004001 1.3e-24 116.7 158 48.7
SalBow7G3129 Salvia bowleyana HOM05D003481 ORTHO05D004001 1.6e-22 109.8 160 48.8
SGA_v2.0_scaffold341G49384 Striga asiatica HOM05D003481 ORTHO05D004001 4.7e-22 108.2 158 46.2
Peaxi162Scf00267g00817 Petunia axillaris HOM05D003481 ORTHO05D004001 5.2e-21 104.8 135 48.1
CAN.G306.7 Capsicum annuum HOM05D003481 ORTHO05D004001 2.6e-20 102.4 134 47.8
Sopen02g018780 Solanum pennellii HOM05D003481 ORTHO05D004001 3.4e-20 102.1 132 48.5
Lj1A1155G48 Lonicera japonica HOM05D003481 ORTHO05D004001 5.7e-20 101.3 135 50.4
Solyc02g030110.2 Solanum lycopersicum HOM05D003481 ORTHO05D004001 1.7e-19 99.8 134 46.3
Sopen02g009430 Solanum pennellii HOM05D003481 ORTHO05D004001 2.2e-19 99.4 134 46.3
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 1.4e-18 96.7 155 44.5
CSS0014471 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 7.0e-18 94.4 128 46.9
CAN.G954.8 Capsicum annuum HOM05D003481 ORTHO05D004001 7.0e-18 94.4 133 47.4
Nitab4.5_0000378g0100 Nicotiana tabacum HOM05D003481 ORTHO05D004001 7.0e-18 94.4 135 43.7
Dinv03119 Davidia involucrata HOM05D003481 ORTHO05D004001 3.5e-17 92.0 157 41.4
MD04G1237800 Malus domestica HOM05D003481 ORTHO05D004001 5.9e-17 91.3 141 41.1
MELO3C007016.2 Cucumis melo HOM05D003481 ORTHO05D004001 1.7e-16 89.7 149 40.9
Cc09_g07300 Coffea canephora HOM05D003481 ORTHO05D004001 2.3e-16 89.4 144 41.7
Prupe.6G356900 Prunus persica HOM05D003481 ORTHO05D004001 3.0e-16 89.0 160 40.6
Thecc.06G002800 Theobroma cacao HOM05D003481 ORTHO05D004001 3.0e-16 89.0 151 39.7
Nitab4.5_0001298g0070 Nicotiana tabacum HOM05D003481 ORTHO05D004001 3.9e-16 88.6 132 43.2
CsaV3_6G052920 Cucumis sativus L. HOM05D003481 ORTHO05D004001 1.1e-15 87.0 151 41.1
Gohir.A10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 1.1e-15 87.0 141 41.1
Actinidia02453 Actinidia chinensis HOM05D003481 ORTHO05D004001 1.9e-15 86.3 127 44.9
ClCG01G025690 Citrullus lanatus HOM05D003481 ORTHO05D004001 1.9e-15 86.3 155 39.4
Eucgr.K01948 Eucalyptus grandis HOM05D003481 ORTHO05D004001 1.9e-15 86.3 154 39.6
Sabra11G0145500 Salix brachista HOM05D003481 ORTHO05D004001 2.5e-15 85.9 152 40.1
Gohir.D10G004400 Gossypium hirsutum HOM05D003481 ORTHO05D004001 4.3e-15 85.1 141 41.1
Gorai.011G004800 Gossypium raimondii HOM05D003481 ORTHO05D004001 4.3e-15 85.1 141 41.1
Nitab4.5_0010415g0040 Nicotiana tabacum HOM05D003481 ORTHO05D004001 4.3e-15 85.1 129 46.5
Ah.13g071230 Amaranthus hybridus HOM05D003481 ORTHO05D004001 5.6e-15 84.7 143 42.7
AUR62028144 Chenopodium quinoa HOM05D003481 ORTHO05D004001 5.6e-15 84.7 152 37.5
Sed0003597 Sechium edule HOM05D003481 ORTHO05D004001 7.3e-15 84.3 158 36.7
Hma1.2p1_0410F.1_g147020 Hydrangea macrophylla HOM05D003481 ORTHO05D004001 9.5e-15 84.0 137 43.1
AUR62005919 Chenopodium quinoa HOM05D003481 ORTHO05D004001 1.2e-14 83.6 152 38.2
FvH4_6g01010 Fragaria vesca HOM05D003481 ORTHO05D004001 1.2e-14 83.6 155 39.4
Nitab4.5_0002444g0030 Nicotiana tabacum HOM05D003481 ORTHO05D004001 1.2e-14 83.6 132 42.4
Sed0000926 Sechium edule HOM05D003481 ORTHO05D004001 2.1e-14 82.8 155 36.8
Rhsim13G0126800 Rhododendron simsii HOM05D003481 ORTHO05D004001 2.8e-14 82.4 153 40.5
Atru.chr8.321 Acer truncatum HOM05D003481 ORTHO05D004001 4.7e-14 81.6 156 34.6
Manes.03G069500 Manihot esculenta HOM05D003481 ORTHO05D004001 4.7e-14 81.6 160 36.2
PSO170G3331 Papaver somniferum HOM05D003481 ORTHO05D004001 4.7e-14 81.6 135 40.7
RcHm_v2.0_Chr3g0448451 Rosa chinensis HOM05D003481 ORTHO05D004001 4.7e-14 81.6 146 38.4
vmacro03482 Vaccinium macrocarpon HOM05D003481 ORTHO05D004001 4.7e-14 81.6 148 40.5
GSVIVG01037972001 Vitis vinifera HOM05D003481 ORTHO05D004001 4.7e-14 81.6 133 43.6
Duzib235G1444 Durio zibethinus HOM05D003481 ORTHO05D004001 6.2e-14 81.3 152 36.8
PSO063G1971 Papaver somniferum HOM05D003481 ORTHO05D004001 6.2e-14 81.3 135 40.0
TAR624G0033 Trochodendron aralioides HOM05D003481 ORTHO05D004001 6.2e-14 81.3 160 38.8
COL.COLO4_26841 Corchorus olitorius HOM05D003481 ORTHO05D004001 1.4e-13 80.1 152 36.8
QL05p065371 Quercus lobata HOM05D003481 ORTHO05D004001 1.4e-13 80.1 131 38.2
QL08p057617 Quercus lobata HOM05D003481 ORTHO05D004001 1.4e-13 80.1 131 38.2
Aa31LG6G2100 Aethionema arabicum HOM05D003481 ORTHO05D004001 1.8e-13 79.7 152 37.5
Potri.011G154000 Populus trichocarpa HOM05D003481 ORTHO05D004001 1.8e-13 79.7 154 38.3
TAR626G0933 Trochodendron aralioides HOM05D003481 ORTHO05D004001 1.8e-13 79.7 160 36.9
FAN02G3168 Fragaria x ananassa HOM05D003481 ORTHO05D004001 2.3e-13 79.3 155 38.1
Ciclev10014122m.g Citrus clementina HOM05D003481 ORTHO05D004001 3.1e-13 79.0 157 36.9
HanXRQChr06g0183401 Helianthus annuus HOM05D003481 ORTHO05D004001 3.1e-13 79.0 130 40.8
Sc13g0010770 Simmondsia chinensis HOM05D003481 ORTHO05D004001 3.1e-13 79.0 157 37.6
TPR.G22668 Trifolium pratense HOM05D003481 ORTHO05D004001 4.0e-13 78.6 141 39.0
Glyma.09G083800 Glycine max HOM05D003481 ORTHO05D004001 5.2e-13 78.2 157 36.3
Glyma.15G192300 Glycine max HOM05D003481 ORTHO05D004001 5.2e-13 78.2 157 36.9
Lalb_Chr08g0233181 Lupinus albus HOM05D003481 ORTHO05D004001 5.2e-13 78.2 147 38.8
MD12G1256000 Malus domestica HOM05D003481 ORTHO05D004001 5.2e-13 78.2 164 35.4
A03p51930 Brassica napus HOM05D003481 ORTHO05D004001 6.8e-13 77.8 143 37.1
Lj6g0004300 Lotus japonicus HOM05D003481 ORTHO05D004001 6.8e-13 77.8 149 38.9
Psat0s4071g0040 Pisum sativum HOM05D003481 ORTHO05D004001 6.8e-13 77.8 139 37.4
ECA236G0663 Erigeron canadensis HOM05D003481 ORTHO05D004001 2.0e-12 76.3 128 39.1
Phvul.009G217900 Phaseolus vulgaris HOM05D003481 ORTHO05D004001 2.0e-12 76.3 157 36.3
EL10Ac3g05104 Beta vulgaris HOM05D003481 ORTHO05D004001 2.6e-12 75.9 155 36.1
Cfa000748 Carpinus fangiana HOM05D003481 ORTHO05D004001 2.6e-12 75.9 156 35.3
HanXRQChr04g0119881 Helianthus annuus HOM05D003481 ORTHO05D004001 2.6e-12 75.9 126 41.3
Nn4g25046 Nelumbo nucifera HOM05D003481 ORTHO05D004001 2.6e-12 75.9 153 34.0
C07p50430 Brassica napus HOM05D003481 ORTHO05D004001 5.8e-12 74.7 143 35.0
BolC7t45545H Brassica oleracea HOM05D003481 ORTHO05D004001 5.8e-12 74.7 143 35.0
BraA03t14280Z Brassica rapa HOM05D003481 ORTHO05D004001 5.8e-12 74.7 141 35.5
arahy.Tifrunner.gnm1.ann1.0SF8RD Arachis hypogaea HOM05D003481 ORTHO05D004001 7.5e-12 74.3 148 36.5
Potri.001G442900 Populus trichocarpa HOM05D003481 ORTHO05D004001 7.5e-12 74.3 157 36.3
THA.LOC104812894 Tarenaya hassleriana HOM05D003481 ORTHO05D004001 7.5e-12 74.3 143 35.7
TWI15G0246 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 7.5e-12 74.3 157 35.0
CiPaw.09G149800 Carya illinoinensis HOM05D003481 ORTHO05D004001 9.8e-12 73.9 157 36.9
Ca_02512_v3 Cicer arietinum L. HOM05D003481 ORTHO05D004001 9.8e-12 73.9 149 38.3
arahy.Tifrunner.gnm1.ann1.D6X22R Arachis hypogaea HOM05D003481 ORTHO05D004001 1.3e-11 73.6 147 36.1
Haze_05982 Corylus avellana HOM05D003481 ORTHO05D004001 1.3e-11 73.6 156 34.0
Hund09767 Selenicereus undatus HOM05D003481 ORTHO05D004001 1.7e-11 73.2 150 36.7
CARHR226290 Cardamine hirsuta HOM05D003481 ORTHO05D004001 2.2e-11 72.8 152 36.2
SHI31589 Sapria himalayana HOM05D003481 ORTHO05D004001 2.2e-11 72.8 129 39.5
BcaNung07226 Brassica carinata HOM05D003481 ORTHO05D004001 2.9e-11 72.4 152 32.2
Lsat_1_v5_gn_7_35621 Lactuca sativa HOM05D003481 ORTHO05D004001 2.9e-11 72.4 127 40.2
Zm00001eb419780 Zea mays HOM05D003481 ORTHO05D004001 6.4e-11 71.2 132 36.4
CDE09G0686 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 1.4e-10 70.1 129 35.7
Sabra16G0299600 Salix brachista HOM05D003481 ORTHO05D004001 1.4e-10 70.1 157 35.0
AL7G34630 Arabidopsis lyrata HOM05D003481 ORTHO05D004001 2.4e-10 69.3 152 32.2
BcaNung02560 Brassica carinata HOM05D003481 ORTHO05D004001 3.2e-10 68.9 153 34.0
CDE02G2268 Ceratophyllum demersum HOM05D003481 ORTHO05D004001 3.2e-10 68.9 133 35.3
TWI38G1754 Tripterygium wilfordii HOM05D003481 ORTHO05D004001 3.2e-10 68.9 156 33.3
AT4G19490 Arabidopsis thaliana HOM05D003481 ORTHO05D004001 5.4e-10 68.2 152 34.9
Thhalv10024300m.g Eutrema salsugineum HOM05D003481 ORTHO05D004001 5.4e-10 68.2 152 30.9
Aqoxy7G02779 Aquilegia oxysepala HOM05D003481 ORTHO05D004001 9.2e-10 67.4 113 39.8
BcaNung01774 Brassica carinata HOM05D003481 ORTHO05D004001 1.6e-09 66.6 150 33.3
Carub.0007s2172 Capsella rubella HOM05D003481 ORTHO05D004001 1.6e-09 66.6 59 54.2
Zm00001eb088370 Zea mays HOM05D003481 ORTHO05D004001 2.0e-09 66.2 132 35.6
BcaC09g51402 Brassica carinata HOM05D003481 ORTHO05D004001 4.6e-09 65.1 152 35.5
C01p13480 Brassica napus HOM05D003481 ORTHO05D004001 6.0e-09 64.7 152 30.3
BolC1t01321H Brassica oleracea HOM05D003481 ORTHO05D004001 6.0e-09 64.7 152 30.3
SEGI_29135 Sequoiadendron giganteum HOM05D003481 ORTHO05D004001 6.0e-09 64.7 144 34.7
CSS0035493 Camellia sinensis var. sinensis HOM05D003481 ORTHO05D004001 7.8e-09 64.3 59 52.5
DCAR_001341 Daucus carota HOM05D003481 ORTHO05D004001 1.0e-08 63.9 150 32.7
Medtr2g047908 Medicago truncatula HOM05D003481 ORTHO05D004001 1.0e-08 63.9 141 33.3
BraA01t01089Z Brassica rapa HOM05D003481 ORTHO05D004001 1.7e-08 63.2 144 31.9
A01p11430 Brassica napus HOM05D003481 ORTHO05D004001 3.0e-08 62.4 145 32.4
Sp7g18100 Schrenkiella parvula HOM05D003481 ORTHO05D004001 3.0e-08 62.4 152 33.6
ATR1132G011 Amborella trichopoda HOM05D003481 ORTHO05D004001 2.5e-07 59.3 154 30.5
Pp3c11_18680 Physcomitrium patens HOM05D003481 ORTHO05D004001 5.6e-07 58.2 54 50.0
RcHm_v2.0_Chr7g0240301 Rosa chinensis HOM05D003481 ORTHO05D004001 5.6e-07 58.2 144 35.4
arahy.Tifrunner.gnm1.ann1.16LSI5 Arachis hypogaea HOM05D003481 ORTHO05D004001 9.5e-07 57.4 110 33.6
DCAR_004311 Daucus carota HOM05D003481 ORTHO05D004001 2.8e-06 55.8 149 30.9


User provided reference genes

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