Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001602.1 Olea europaea HOM05D000912 ORTHO05D001232 3.4e-164 581.6 299 100.0
Oeu054518.1 Olea europaea HOM05D000912 ORTHO05D001232 9.3e-98 360.9 354 62.7
Oeu011002.1 Olea europaea HOM05D000912 ORTHO05D001232 1.1e-74 284.3 339 55.2
Dinv37769 Davidia involucrata HOM05D000912 ORTHO05D001232 4.4e-47 192.6 356 41.0
CSS0005184 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.3e-46 191.0 355 39.7
CSS0006911 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.3e-46 191.0 355 39.7
Oeu036757.1 Olea europaea HOM05D000912 ORTHO05D001232 3.1e-45 186.4 331 42.9
Dinv20312 Davidia involucrata HOM05D000912 ORTHO05D001232 2.0e-44 183.7 356 39.6
GSVIVG01029442001 Vitis vinifera HOM05D000912 ORTHO05D001232 2.7e-44 183.3 327 40.1
Nitab4.5_0010895g0020 Nicotiana tabacum HOM05D000912 ORTHO05D001232 1.7e-43 180.6 354 39.5
Oeu035306.2 Olea europaea HOM05D000912 ORTHO05D001232 2.3e-43 180.3 313 43.1
Oeu027255.1 Olea europaea HOM05D000912 ORTHO05D001232 8.6e-43 178.3 351 41.9
Oeu061990.1 Olea europaea HOM05D000912 ORTHO05D001232 8.6e-43 178.3 325 40.9
Nitab4.5_0000129g0360 Nicotiana tabacum HOM05D000912 ORTHO05D001232 1.5e-42 177.6 361 39.1
Cc11_g00260 Coffea canephora HOM05D000912 ORTHO05D001232 4.0e-40 169.5 358 37.7
Manes.14G000600 Manihot esculenta HOM05D000912 ORTHO05D001232 5.2e-40 169.1 356 36.5
Nitab4.5_0000069g0570 Nicotiana tabacum HOM05D000912 ORTHO05D001232 3.4e-39 166.4 352 38.1
Nitab4.5_0003699g0060 Nicotiana tabacum HOM05D000912 ORTHO05D001232 7.5e-39 165.2 353 37.4
Peaxi162Scf00329g00813 Petunia axillaris HOM05D000912 ORTHO05D001232 9.8e-39 164.9 358 38.0
CAN.G282.75 Capsicum annuum HOM05D000912 ORTHO05D001232 2.2e-38 163.7 368 35.3
MSTRG.6589 Avicennia marina HOM05D000912 ORTHO05D001232 3.7e-38 162.9 355 37.5
CiPaw.02G050600 Carya illinoinensis HOM05D000912 ORTHO05D001232 3.7e-38 162.9 350 38.3
Potri.014G000500 Populus trichocarpa HOM05D000912 ORTHO05D001232 6.4e-38 162.2 354 35.9
QL05p085111 Quercus lobata HOM05D000912 ORTHO05D001232 8.3e-38 161.8 356 36.8
Sopen01g003670 Solanum pennellii HOM05D000912 ORTHO05D001232 8.3e-38 161.8 363 36.4
Sabra14G0003100 Salix brachista HOM05D000912 ORTHO05D001232 1.1e-37 161.4 354 36.7
Migut.M00129 Erythranthe guttata HOM05D000912 ORTHO05D001232 1.9e-37 160.6 339 38.3
Solyc01g008120.4 Solanum lycopersicum HOM05D000912 ORTHO05D001232 1.9e-37 160.6 369 35.8
Migut.H01257 Erythranthe guttata HOM05D000912 ORTHO05D001232 1.2e-36 157.9 325 39.1
Cpa.g.sc10.17 Carica papaya HOM05D000912 ORTHO05D001232 1.6e-36 157.5 351 37.6
CiPaw.02G051600 Carya illinoinensis HOM05D000912 ORTHO05D001232 3.9e-35 152.9 353 36.8
CSS0008849 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 5.0e-35 152.5 360 35.6
Lj7C414G2 Lonicera japonica HOM05D000912 ORTHO05D001232 5.0e-35 152.5 341 37.8
Hma1.2p1_0108F.1_g051710 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 3.3e-34 149.8 349 35.2
vmacro21728 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 4.3e-34 149.4 353 34.0
Manes.14G000700 Manihot esculenta HOM05D000912 ORTHO05D001232 7.3e-34 148.7 354 34.7
Haze_16248 Corylus avellana HOM05D000912 ORTHO05D001232 1.2e-33 147.9 356 34.6
Thecc.06G049100 Theobroma cacao HOM05D000912 ORTHO05D001232 3.6e-33 146.4 355 36.1
Actinidia00648 Actinidia chinensis HOM05D000912 ORTHO05D001232 1.1e-32 144.8 328 36.3
Rhsim03G0000100 Rhododendron simsii HOM05D000912 ORTHO05D001232 1.8e-32 144.1 346 35.0
vmacro12581 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 5.2e-32 142.5 350 34.6
SGA_v2.0_scaffold49G18366 Striga asiatica HOM05D000912 ORTHO05D001232 6.8e-32 142.1 348 37.6
Actinidia21902 Actinidia chinensis HOM05D000912 ORTHO05D001232 1.5e-31 141.0 348 35.9
Sabra07G0002500 Salix brachista HOM05D000912 ORTHO05D001232 2.0e-31 140.6 352 34.7
Duzib192G0163 Durio zibethinus HOM05D000912 ORTHO05D001232 4.9e-30 136.0 355 35.2
TWI12G0824 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 1.1e-29 134.8 350 34.6
Gorai.011G001400 Gossypium raimondii HOM05D000912 ORTHO05D001232 1.9e-29 134.0 358 34.4
Rhsim08G0252700 Rhododendron simsii HOM05D000912 ORTHO05D001232 3.2e-29 133.3 347 33.4
Gohir.D06G189400 Gossypium hirsutum HOM05D000912 ORTHO05D001232 4.1e-29 132.9 360 33.6
Prupe.3G028200 Prunus persica HOM05D000912 ORTHO05D001232 4.1e-29 132.9 358 31.3
COL.COLO4_26805 Corchorus olitorius HOM05D000912 ORTHO05D001232 7.0e-29 132.1 350 34.0
TWI18G1361 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 9.2e-29 131.7 356 35.1
Atru.chr3.4082 Acer truncatum HOM05D000912 ORTHO05D001232 1.2e-28 131.3 354 34.5
Ciclev10027674m.g Citrus clementina HOM05D000912 ORTHO05D001232 1.2e-28 131.3 355 36.1
Psat7g264600 Pisum sativum HOM05D000912 ORTHO05D001232 1.2e-28 131.3 359 33.7
Gohir.D10G001100 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.6e-28 131.0 358 34.1
Ca_03788_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 2.1e-28 130.6 361 33.8
MD09G1170000 Malus domestica HOM05D000912 ORTHO05D001232 2.7e-28 130.2 355 32.4
Gorai.010G222100 Gossypium raimondii HOM05D000912 ORTHO05D001232 4.6e-28 129.4 361 34.3
TWI75G1589 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 4.6e-28 129.4 351 34.2
Gohir.A06G182500 Gossypium hirsutum HOM05D000912 ORTHO05D001232 6.0e-28 129.0 361 34.1
Actinidia38823 Actinidia chinensis HOM05D000912 ORTHO05D001232 7.8e-28 128.6 358 33.8
arahy.Tifrunner.gnm1.ann1.DM6RAW Arachis hypogaea HOM05D000912 ORTHO05D001232 7.8e-28 128.6 355 33.8
Duzib235G0834 Durio zibethinus HOM05D000912 ORTHO05D001232 1.3e-27 127.9 329 35.0
Gohir.D06G118100 Gossypium hirsutum HOM05D000912 ORTHO05D001232 2.3e-27 127.1 350 34.3
arahy.Tifrunner.gnm1.ann1.PZ05LS Arachis hypogaea HOM05D000912 ORTHO05D001232 3.0e-27 126.7 355 33.2
RcHm_v2.0_Chr2g0148331 Rosa chinensis HOM05D000912 ORTHO05D001232 6.6e-27 125.6 357 33.1
Nn2g12790 Nelumbo nucifera HOM05D000912 ORTHO05D001232 1.9e-26 124.0 377 31.3
Medtr4g005050 Medicago truncatula HOM05D000912 ORTHO05D001232 3.3e-26 123.2 376 32.7
Nn8g41285 Nelumbo nucifera HOM05D000912 ORTHO05D001232 3.3e-26 123.2 349 33.2
Gorai.009G121700 Gossypium raimondii HOM05D000912 ORTHO05D001232 5.6e-26 122.5 349 31.8
FAN05G3420 Fragaria x ananassa HOM05D000912 ORTHO05D001232 7.3e-26 122.1 358 32.1
Peaxi162Scf00097g01412 Petunia axillaris HOM05D000912 ORTHO05D001232 7.3e-26 122.1 331 33.2
FAN09G3798 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.6e-25 120.9 358 32.1
FvH4_6g36320 Fragaria vesca HOM05D000912 ORTHO05D001232 2.8e-25 120.2 357 31.9
Cfa014793 Carpinus fangiana HOM05D000912 ORTHO05D001232 4.7e-25 119.4 332 34.0
FAN02G2903 Fragaria x ananassa HOM05D000912 ORTHO05D001232 4.7e-25 119.4 358 32.7
Lalb_Chr19g0140521 Lupinus albus HOM05D000912 ORTHO05D001232 4.7e-25 119.4 351 32.5
FAN14G0321 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.1e-24 118.2 359 32.3
FAN14G4043 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.1e-24 118.2 359 32.3
CANSAT01G3172 Cannabis sativa HOM05D000912 ORTHO05D001232 2.3e-24 117.1 377 32.9
Phvul.010G165900 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 6.8e-24 115.5 352 31.8
Gohir.A05G116900 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.2e-23 114.8 348 32.2
Glyma.08G226700 Glycine max HOM05D000912 ORTHO05D001232 1.5e-23 114.4 345 32.8
Gohir.A10G000900 Gossypium hirsutum HOM05D000912 ORTHO05D001232 2.0e-23 114.0 358 32.7
Glyma.07G000400 Glycine max HOM05D000912 ORTHO05D001232 3.4e-23 113.2 349 32.1
Gorai.010G135700 Gossypium raimondii HOM05D000912 ORTHO05D001232 3.4e-23 113.2 350 33.1
ECA247G1226 Erigeron canadensis HOM05D000912 ORTHO05D001232 5.8e-23 112.5 239 35.6
Prupe.7G030400 Prunus persica HOM05D000912 ORTHO05D001232 5.8e-23 112.5 357 30.3
VMungo0331G0786 Vigna mungo HOM05D000912 ORTHO05D001232 7.5e-23 112.1 349 31.5
Potri.007G003400 Populus trichocarpa HOM05D000912 ORTHO05D001232 1.7e-22 110.9 213 38.5
Hma1.2p1_0960F.1_g241630 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 4.9e-22 109.4 353 31.2
Gohir.D05G117800 Gossypium hirsutum HOM05D000912 ORTHO05D001232 6.4e-22 109.0 349 30.7
Solyc04g008610.3 Solanum lycopersicum HOM05D000912 ORTHO05D001232 8.3e-22 108.6 349 32.4
CAN.G880.12 Capsicum annuum HOM05D000912 ORTHO05D001232 1.4e-21 107.8 332 33.7
SGA_v2.0_scaffold73G24406 Striga asiatica HOM05D000912 ORTHO05D001232 5.4e-21 105.9 333 33.9
Actinidia31119 Actinidia chinensis HOM05D000912 ORTHO05D001232 7.1e-21 105.5 214 36.0
VMungo1080G1388 Vigna mungo HOM05D000912 ORTHO05D001232 7.1e-21 105.5 358 30.4
Lj3g0006194 Lotus japonicus HOM05D000912 ORTHO05D001232 1.2e-20 104.8 334 30.2
Sopen04g003770 Solanum pennellii HOM05D000912 ORTHO05D001232 1.2e-20 104.8 347 31.7
ECA246G3011 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.6e-20 104.4 298 32.9
Lalb_Chr04g0264771 Lupinus albus HOM05D000912 ORTHO05D001232 2.1e-20 104.0 349 32.1
TPR.G38732 Trifolium pratense HOM05D000912 ORTHO05D001232 1.3e-19 101.3 250 34.8
THA.LOC104813621 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 2.5e-18 97.1 302 29.5
HanXRQChr05g0150621 Helianthus annuus HOM05D000912 ORTHO05D001232 7.3e-18 95.5 320 31.9
Aqoxy7G02531 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 2.1e-17 94.0 326 30.7
Lsat_1_v5_gn_4_131340 Lactuca sativa HOM05D000912 ORTHO05D001232 2.1e-17 94.0 330 32.7
CsaV3_3G000040 Cucumis sativus L. HOM05D000912 ORTHO05D001232 3.6e-17 93.2 360 30.3
AUR62025681 Chenopodium quinoa HOM05D000912 ORTHO05D001232 6.2e-17 92.4 342 29.5
THA.LOC104812346 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 6.2e-17 92.4 316 30.4
Phvul.005G082300 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 1.4e-16 91.3 341 30.8
unitig_62.g23240 Utricularia gibba HOM05D000912 ORTHO05D001232 1.4e-16 91.3 304 30.6
Aa31LG4G1980 Aethionema arabicum HOM05D000912 ORTHO05D001232 2.4e-16 90.5 315 30.8
Ah.15g094210 Amaranthus hybridus HOM05D000912 ORTHO05D001232 2.4e-16 90.5 345 29.0
Glyma.15G000300 Glycine max HOM05D000912 ORTHO05D001232 3.1e-16 90.1 346 30.3
THA.LOC104808111 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 5.2e-16 89.4 316 29.1
Carub.0002s2587 Capsella rubella HOM05D000912 ORTHO05D001232 6.8e-16 89.0 325 30.5
Ah.08g218030 Amaranthus hybridus HOM05D000912 ORTHO05D001232 8.9e-16 88.6 336 28.0
Sc23g0006050 Simmondsia chinensis HOM05D000912 ORTHO05D001232 8.9e-16 88.6 338 29.0
PSO017G2537 Papaver somniferum HOM05D000912 ORTHO05D001232 1.2e-15 88.2 259 32.8
MELO3C013698.2 Cucumis melo HOM05D000912 ORTHO05D001232 4.4e-15 86.3 325 29.5
Hund18548 Selenicereus undatus HOM05D000912 ORTHO05D001232 4.4e-15 86.3 338 29.3
EL10Ac7g18098 Beta vulgaris HOM05D000912 ORTHO05D001232 9.9e-15 85.1 322 29.8
TAR626G1203 Trochodendron aralioides HOM05D000912 ORTHO05D001232 1.3e-14 84.7 344 29.7
DCAR_013192 Daucus carota HOM05D000912 ORTHO05D001232 1.7e-14 84.3 331 30.8
HanXRQChr09g0266961 Helianthus annuus HOM05D000912 ORTHO05D001232 1.7e-14 84.3 297 29.3
HanXRQChr11g0326491 Helianthus annuus HOM05D000912 ORTHO05D001232 1.7e-14 84.3 313 30.4
MD17G1157100 Malus domestica HOM05D000912 ORTHO05D001232 2.9e-14 83.6 102 45.1
PSO170G3675 Papaver somniferum HOM05D000912 ORTHO05D001232 2.9e-14 83.6 349 28.1
AUR62001296 Chenopodium quinoa HOM05D000912 ORTHO05D001232 3.8e-14 83.2 342 28.7
AT1G79000 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 6.4e-14 82.4 315 28.3
Hund05659 Selenicereus undatus HOM05D000912 ORTHO05D001232 6.4e-14 82.4 328 29.3
CARHR072670 Cardamine hirsuta HOM05D000912 ORTHO05D001232 1.1e-13 81.6 321 28.0
ClCG10G000030 Citrullus lanatus HOM05D000912 ORTHO05D001232 1.9e-13 80.9 256 32.0
ECA232G2502 Erigeron canadensis HOM05D000912 ORTHO05D001232 5.4e-13 79.3 261 31.0
TAR636G0354 Trochodendron aralioides HOM05D000912 ORTHO05D001232 5.4e-13 79.3 330 32.1
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 7.1e-13 79.0 302 28.5
Actinidia21665 Actinidia chinensis HOM05D000912 ORTHO05D013129 9.2e-13 78.6 87 49.4
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 6.0e-12 75.9 247 30.8
Sed0017344 Sechium edule HOM05D000912 ORTHO05D001232 7.8e-12 75.5 279 31.2
SGA_v2.0_scaffold181G39745 Striga asiatica HOM05D000912 ORTHO05D001232 1.3e-11 74.7 346 29.5
AL2G39460 Arabidopsis lyrata HOM05D000912 ORTHO05D001232 1.1e-10 71.6 331 26.9
PGR102G0551 Punica granatum HOM05D000912 ORTHO05D001232 2.5e-10 70.5 328 23.5
Sp5g34050 Schrenkiella parvula HOM05D000912 ORTHO05D001232 7.3e-10 68.9 314 26.4
A07p44140 Brassica napus HOM05D000912 ORTHO05D001232 2.1e-09 67.4 326 26.7
BcaC08g47464 Brassica carinata HOM05D000912 ORTHO05D001232 1.4e-08 64.7 323 26.6
C06p52870 Brassica napus HOM05D000912 ORTHO05D001232 1.4e-08 64.7 323 26.6
Aa31LG7G1170 Aethionema arabicum HOM05D000912 ORTHO05D001232 1.8e-08 64.3 306 25.8
Thhalv10006544m.g Eutrema salsugineum HOM05D000912 ORTHO05D001232 6.9e-08 62.4 296 28.0
Sed0017205 Sechium edule HOM05D000912 ORTHO05D001232 5.8e-07 59.3 310 29.7
unitig_0.g720 Utricularia gibba HOM05D000912 ORTHO05D001232 9.9e-07 58.5 295 28.1
Potri.007G003301 Populus trichocarpa HOM05D000912 ORTHO05D011835 2.2e-06 57.4 91 47.3
Zm00001eb209230 Zea mays HOM05D000912 ORTHO05D001232 3.8e-06 56.6 259 26.6
A02p22450 Brassica napus HOM05D000912 ORTHO05D001232 6.4e-06 55.8 304 27.0
BraA02t07249Z Brassica rapa HOM05D000912 ORTHO05D001232 6.4e-06 55.8 304 27.0


User provided reference genes

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