Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001536.1 Olea europaea HOM05D001470 ORTHO05D006430 1.2e-46 189.5 93 100.0
TAR381G1563 Trochodendron aralioides HOM05D001470 ORTHO05D006430 1.1e-31 139.8 101 70.3
MSTRG.1421 Avicennia marina HOM05D001470 ORTHO05D006430 1.4e-31 139.4 103 68.0
Eucgr.F04332 Eucalyptus grandis HOM05D001470 ORTHO05D006430 1.4e-31 139.4 101 71.3
Haze_17520 Corylus avellana HOM05D001470 ORTHO05D006430 2.3e-31 138.7 100 70.0
CiPaw.16G025200 Carya illinoinensis HOM05D001470 ORTHO05D006430 5.2e-31 137.5 101 68.3
CiPaw.16G025300 Carya illinoinensis HOM05D001470 ORTHO05D006430 5.2e-31 137.5 101 68.3
CSS0002859 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006430 6.8e-31 137.1 101 68.3
COL.COLO4_03955 Corchorus olitorius HOM05D001470 ORTHO05D006430 6.8e-31 137.1 101 70.3
Gohir.A06G046900 Gossypium hirsutum HOM05D001470 ORTHO05D006430 6.8e-31 137.1 101 70.3
Gorai.010G052800 Gossypium raimondii HOM05D001470 ORTHO05D006430 6.8e-31 137.1 101 70.3
Solyc11g012820.2 Solanum lycopersicum HOM05D001470 ORTHO05D006430 6.8e-31 137.1 101 68.3
Sopen11g007560 Solanum pennellii HOM05D001470 ORTHO05D006430 6.8e-31 137.1 101 68.3
Cfa018559 Carpinus fangiana HOM05D001470 ORTHO05D006430 8.9e-31 136.7 100 70.0
PGSC0003DMG400006047 Solanum tuberosum HOM05D001470 ORTHO05D006430 8.9e-31 136.7 101 68.3
Peaxi162Scf00310g00416 Petunia axillaris HOM05D001470 ORTHO05D006430 1.2e-30 136.3 101 68.3
Thecc.08G130500 Theobroma cacao HOM05D001470 ORTHO05D006430 1.2e-30 136.3 100 71.0
Nitab4.5_0000111g0110 Nicotiana tabacum HOM05D001470 ORTHO05D006430 1.5e-30 136.0 101 67.3
QL09p033191 Quercus lobata HOM05D001470 ORTHO05D006430 1.5e-30 136.0 101 68.3
Manes.02G166700 Manihot esculenta HOM05D001470 ORTHO05D006430 2.0e-30 135.6 101 68.3
PGR044G0726 Punica granatum HOM05D001470 ORTHO05D006430 2.0e-30 135.6 101 69.3
CANSAT56G2008 Cannabis sativa HOM05D001470 ORTHO05D006430 2.6e-30 135.2 101 67.3
Aqoxy5G02375 Aquilegia oxysepala HOM05D001470 ORTHO05D006430 3.4e-30 134.8 101 69.3
CAN.G1486.1 Capsicum annuum HOM05D001470 ORTHO05D006430 3.4e-30 134.8 99 69.7
Duzib093G1303 Durio zibethinus HOM05D001470 ORTHO05D006430 4.4e-30 134.4 101 70.3
TWI60G0500 Tripterygium wilfordii HOM05D001470 ORTHO05D006430 1.3e-29 132.9 101 66.3
Hma1.2p1_0542F.1_g175030 Hydrangea macrophylla HOM05D001470 ORTHO05D006430 1.7e-29 132.5 101 66.3
Sc02g0005030 Simmondsia chinensis HOM05D001470 ORTHO05D006430 1.7e-29 132.5 100 66.0
Gohir.D06G047200 Gossypium hirsutum HOM05D001470 ORTHO05D006430 2.2e-29 132.1 101 68.3
Hund26791 Selenicereus undatus HOM05D001470 ORTHO05D006430 2.2e-29 132.1 101 65.3
Cc10_g12440 Coffea canephora HOM05D001470 ORTHO05D006430 2.9e-29 131.7 101 65.3
MBI06_g45440_MAGBIO Magnolia biondii HOM05D001470 ORTHO05D006430 3.7e-29 131.3 98 68.4
GSVIVG01008825001 Vitis vinifera HOM05D001470 ORTHO05D006430 3.7e-29 131.3 100 69.0
Nn1g08900 Nelumbo nucifera HOM05D001470 ORTHO05D006430 8.3e-29 130.2 101 63.4
FAN15G1662 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.1e-28 129.8 101 65.3
FAN20G2509 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.1e-28 129.8 101 65.3
FAN27G2248 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.4e-28 129.4 101 64.4
Potri.005G181300 Populus trichocarpa HOM05D001470 ORTHO05D006430 1.4e-28 129.4 100 64.0
MBI06_g33105_MAGBIO Magnolia biondii HOM05D001470 ORTHO05D006430 1.9e-28 129.0 98 68.4
Lj7C346G4 Lonicera japonica HOM05D001470 ORTHO05D006430 3.2e-28 128.3 101 63.4
SGA_v2.0_scaffold52G18933 Striga asiatica HOM05D001470 ORTHO05D006430 3.2e-28 128.3 103 64.1
Atru.chr13.1538 Acer truncatum HOM05D001470 ORTHO05D006430 4.1e-28 127.9 101 63.4
FvH4_2g27570 Fragaria vesca HOM05D001470 ORTHO05D006430 9.2e-28 126.7 101 64.4
SalBow7G0673 Salvia bowleyana HOM05D001470 ORTHO05D006430 9.2e-28 126.7 103 62.1
Nitab4.5_0006720g0030 Nicotiana tabacum HOM05D001470 ORTHO05D006430 1.2e-27 126.3 93 67.7
DCAR_018873 Daucus carota HOM05D001470 ORTHO05D006430 1.6e-27 125.9 105 62.9
arahy.Tifrunner.gnm1.ann1.R82D2M Arachis hypogaea HOM05D001470 ORTHO05D006430 2.1e-27 125.6 86 67.4
EL10Ac2g03027 Beta vulgaris HOM05D001470 ORTHO05D006430 2.1e-27 125.6 102 61.8
CDE07G1761 Ceratophyllum demersum HOM05D001470 ORTHO05D006430 2.7e-27 125.2 101 62.4
MD15G1344500 Malus domestica HOM05D001470 ORTHO05D006430 2.7e-27 125.2 101 62.4
vmacro12378 Vaccinium macrocarpon HOM05D001470 ORTHO05D006430 2.7e-27 125.2 101 63.4
PSO541G1645 Papaver somniferum HOM05D001470 ORTHO05D006430 4.6e-27 124.4 101 63.4
Sabra05G0137300 Salix brachista HOM05D001470 ORTHO05D006430 6.0e-27 124.0 100 63.0
AUR62008715 Chenopodium quinoa HOM05D001470 ORTHO05D006430 7.8e-27 123.6 102 61.8
AUR62025519 Chenopodium quinoa HOM05D001470 ORTHO05D006430 7.8e-27 123.6 102 61.8
AUR62043484 Chenopodium quinoa HOM05D001470 ORTHO05D006430 7.8e-27 123.6 102 61.8
PSO675G8498 Papaver somniferum HOM05D001470 ORTHO05D006430 7.8e-27 123.6 101 63.4
Ciclev10001485m.g Citrus clementina HOM05D001470 ORTHO05D006430 1.0e-26 123.2 100 61.0
Ah.01g003720 Amaranthus hybridus HOM05D001470 ORTHO05D006430 1.3e-26 122.9 99 63.6
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.3e-26 122.9 101 67.3
Medtr3g088380 Medicago truncatula HOM05D001470 ORTHO05D006430 1.3e-26 122.9 101 59.4
Potri.002G080100 Populus trichocarpa HOM05D001470 ORTHO05D006430 1.3e-26 122.9 98 64.3
Migut.L00248 Erythranthe guttata HOM05D001470 ORTHO05D006430 5.1e-26 120.9 97 62.9
RcHm_v2.0_Chr6g0296411 Rosa chinensis HOM05D001470 ORTHO05D006430 5.1e-26 120.9 101 60.4
Ca_16595_v3 Cicer arietinum L. HOM05D001470 ORTHO05D006430 8.6e-26 120.2 101 59.4
TPR.G13461 Trifolium pratense HOM05D001470 ORTHO05D006430 1.1e-25 119.8 101 59.4
Rhsim06G0130900 Rhododendron simsii HOM05D001470 ORTHO05D006430 1.9e-25 119.0 101 60.4
HPP92_021531 Vanilla planifolia HOM05D010164 ORTHO05D006430 1.9e-25 119.0 99 58.6
SEGI_33622 Sequoiadendron giganteum HOM05D001470 ORTHO05D006430 3.3e-25 118.2 99 60.6
Psat5g085800 Pisum sativum HOM05D001470 ORTHO05D006430 4.3e-25 117.9 101 58.4
Lalb_Chr08g0241231 Lupinus albus HOM05D001470 ORTHO05D006430 7.3e-25 117.1 101 59.4
THA.LOC104800216 Tarenaya hassleriana HOM05D001470 ORTHO05D006430 7.3e-25 117.1 99 60.6
arahy.Tifrunner.gnm1.ann1.EB568G Arachis hypogaea HOM05D001470 ORTHO05D006430 9.5e-25 116.7 102 56.9
arahy.Tifrunner.gnm1.ann1.N36HW8 Arachis hypogaea HOM05D001470 ORTHO05D006430 9.5e-25 116.7 102 56.9
Phvul.009G128066 Phaseolus vulgaris HOM05D001470 ORTHO05D006430 9.5e-25 116.7 101 58.4
Phvul.009G128132 Phaseolus vulgaris HOM05D001470 ORTHO05D006430 9.5e-25 116.7 101 58.4
Lj1g0021925 Lotus japonicus HOM05D001470 ORTHO05D006430 1.2e-24 116.3 101 57.4
Glyma.04G246800 Glycine max HOM05D001470 ORTHO05D006430 2.1e-24 115.5 101 57.4
Sed0019306 Sechium edule HOM05D001470 ORTHO05D006430 2.1e-24 115.5 96 62.5
VMungo1309G0926 Vigna mungo HOM05D001470 ORTHO05D006430 2.8e-24 115.2 101 55.4
ATR1001G012 Amborella trichopoda HOM05D001470 ORTHO05D006430 4.7e-24 114.4 102 58.8
MELO3C010507.2 Cucumis melo HOM05D001470 ORTHO05D006430 1.1e-23 113.2 96 60.4
MD00G1201700 Malus domestica HOM05D001470 ORTHO05D006430 1.1e-23 113.2 91 60.4
Os12g0176500 Oryza sativa ssp. japonica HOM05D001470 ORTHO05D006430 1.4e-23 112.8 97 59.8
HanXRQChr11g0326191 Helianthus annuus HOM05D001470 ORTHO05D006430 1.8e-23 112.5 102 56.9
Thhalv10008129m.g Eutrema salsugineum HOM05D001470 ORTHO05D006430 2.3e-23 112.1 101 60.4
BraA08t34817Z Brassica rapa HOM05D001470 ORTHO05D006430 3.1e-23 111.7 101 59.4
CARHR022040 Cardamine hirsuta HOM05D001470 ORTHO05D006430 3.1e-23 111.7 101 61.4
unitig_52.g17218 Utricularia gibba HOM05D001470 ORTHO05D006430 4.0e-23 111.3 97 57.7
FAN24G2905 Fragaria x ananassa HOM05D001470 ORTHO05D006430 5.2e-23 110.9 139 47.5
ClCG11G015940 Citrullus lanatus HOM05D001470 ORTHO05D006430 8.9e-23 110.2 96 58.3
CsaV3_4G028050 Cucumis sativus L. HOM05D001470 ORTHO05D006430 8.9e-23 110.2 93 59.1
Carub.0001s2112 Capsella rubella HOM05D001470 ORTHO05D006430 1.2e-22 109.8 101 60.4
SMO308G0051 Selaginella moellendorffii HOM05D001470 ORTHO05D006430 1.2e-22 109.8 101 57.4
Aa31LG7G5660 Aethionema arabicum HOM05D001470 ORTHO05D006430 2.0e-22 109.0 100 60.0
ECA232G1439 Erigeron canadensis HOM05D001470 ORTHO05D006430 3.4e-22 108.2 102 52.9
BolC8t49737H Brassica oleracea HOM05D001470 ORTHO05D006430 4.4e-22 107.8 101 57.4
CsaV3_UNG115920 Cucumis sativus L. HOM05D001470 ORTHO05D006430 5.8e-22 107.5 92 58.7
Sp1g19230 Schrenkiella parvula HOM05D001470 ORTHO05D006430 5.8e-22 107.5 101 57.4
AL1G34850 Arabidopsis lyrata HOM05D001470 ORTHO05D006430 9.9e-22 106.7 101 58.4
A08p28860 Brassica napus HOM05D001470 ORTHO05D006430 9.9e-22 106.7 101 56.4
Pp3c3_37360 Physcomitrium patens HOM05D001470 ORTHO05D006430 9.9e-22 106.7 99 54.5
C08p21000 Brassica napus HOM05D001470 ORTHO05D006430 1.3e-21 106.3 101 57.4
BcaB07g32165 Brassica carinata HOM05D001470 ORTHO05D006430 1.7e-21 105.9 101 56.4
A06p17770 Brassica napus HOM05D001470 ORTHO05D006430 1.7e-21 105.9 101 56.4
BraA06t24869Z Brassica rapa HOM05D001470 ORTHO05D006430 1.7e-21 105.9 101 56.4
Glyma.06G116000 Glycine max HOM05D001470 ORTHO05D006430 2.9e-21 105.1 86 60.5
AT1G21690 Arabidopsis thaliana HOM05D001470 ORTHO05D006430 4.9e-21 104.4 101 57.4
CBR_g49986 Chara braunii HOM05D001470 ORTHO05D006430 8.4e-21 103.6 103 54.4
BcaC07g39111 Brassica carinata HOM05D001470 ORTHO05D006430 3.2e-20 101.7 92 58.7
BcaC05g26087 Brassica carinata HOM05D001470 ORTHO05D006430 9.2e-20 100.1 97 56.7
C05p20660 Brassica napus HOM05D001470 ORTHO05D006430 9.2e-20 100.1 97 56.7
BolC5t30765H Brassica oleracea HOM05D001470 ORTHO05D006430 9.2e-20 100.1 97 56.7
Mapoly0014s0096 Marchantia polymorpha HOM05D001470 ORTHO05D006430 1.6e-19 99.4 102 48.0
Cpa.g.sc64.131 Carica papaya HOM05D001470 ORTHO05D006430 2.3e-18 95.5 79 64.6
Lsat_1_v5_gn_9_71120 Lactuca sativa HOM05D001470 ORTHO05D006430 2.6e-14 82.0 78 52.6
Thecc.08G130000 Theobroma cacao HOM05D001470 ORTHO05D006430 4.4e-14 81.3 73 60.3
Oeu032206.1 Olea europaea HOM05D001470 ORTHO05D006430 7.6e-14 80.5 76 56.6
CSS0035008 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006430 2.2e-13 79.0 70 60.0
Actinidia15224 Actinidia chinensis HOM05D001470 ORTHO05D006430 1.1e-12 76.6 70 61.4
Prupe.1G492200 Prunus persica HOM05D001470 ORTHO05D006430 1.9e-12 75.9 85 50.6
HPP92_021488 Vanilla planifolia HOM05D001470 ORTHO05D006430 3.6e-08 61.6 71 46.5
SHI06331 Sapria himalayana HOM05D001470 ORTHO05D006430 4.8e-08 61.2 70 48.6
PRCOL_00005755 Prasinoderma coloniale HOM05D001470 ORTHO05D006430 2.0e-06 55.8 61 45.9


User provided reference genes

Program Settings