Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 3.5e-163 579.3 308 100.0
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 2.7e-115 420.2 265 84.9
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 1.1e-111 408.3 312 71.2
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 1.6e-110 404.4 314 68.8
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 1.6e-110 404.4 320 70.6
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 1.6e-107 394.4 327 65.4
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 2.1e-107 394.0 324 67.3
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 1.0e-106 391.7 337 63.8
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 2.3e-106 390.6 324 67.6
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 1.5e-105 387.9 337 65.6
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 2.0e-105 387.5 264 76.5
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 4.4e-105 386.3 260 79.6
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 9.7e-105 385.2 312 70.2
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 9.7e-105 385.2 312 70.2
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 9.7e-105 385.2 264 76.1
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 2.4e-103 380.6 328 65.5
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 2.4e-103 380.6 300 69.7
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 5.3e-103 379.4 313 64.5
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 9.1e-103 378.6 328 65.9
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 1.6e-102 377.9 321 64.8
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 2.7e-102 377.1 318 64.8
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 3.5e-102 376.7 328 65.5
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 7.7e-102 375.6 324 64.8
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 1.3e-101 374.8 319 67.1
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 2.5e-100 370.5 314 64.6
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 4.2e-100 369.8 332 63.0
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 7.2e-100 369.0 314 65.0
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 7.2e-100 369.0 261 76.6
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 2.1e-99 367.5 256 73.0
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 2.1e-99 367.5 319 63.0
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 2.7e-99 367.1 329 62.3
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 5.2e-98 362.8 282 69.1
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 5.2e-98 362.8 309 62.5
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 6.8e-98 362.5 313 63.9
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 8.8e-98 362.1 255 73.3
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 8.8e-98 362.1 255 73.3
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 2.6e-97 360.5 327 61.8
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 2.6e-97 360.5 307 64.8
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 4.4e-97 359.8 259 71.4
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 4.4e-97 359.8 326 65.3
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 7.5e-97 359.0 272 68.8
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 1.7e-96 357.8 272 70.2
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 1.7e-96 357.8 328 64.6
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 1.7e-96 357.8 255 73.3
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 2.2e-96 357.5 309 64.4
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 2.8e-96 357.1 315 63.2
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 4.8e-96 356.3 317 61.5
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 4.8e-96 356.3 306 63.4
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 1.8e-95 354.4 253 71.5
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 3.1e-95 353.6 329 58.1
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 3.1e-95 353.6 245 73.9
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 5.4e-95 352.8 326 63.5
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 7.0e-95 352.4 292 64.7
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 7.0e-95 352.4 256 70.3
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 2.7e-94 350.5 309 64.1
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 3.5e-94 350.1 323 61.3
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 4.5e-94 349.7 312 62.2
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 7.7e-94 349.0 304 65.1
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 3.8e-93 346.7 261 68.2
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 8.6e-93 345.5 252 68.7
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 9.5e-92 342.0 265 67.2
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 9.5e-92 342.0 245 72.2
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 1.2e-91 341.7 264 71.6
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 2.1e-91 340.9 289 65.1
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 4.7e-91 339.7 292 63.4
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 4.7e-91 339.7 293 61.8
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 8.0e-91 339.0 301 61.5
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 6.8e-90 335.9 289 64.4
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 7.5e-89 332.4 302 61.3
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 7.5e-89 332.4 302 61.3
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 1.3e-88 331.6 291 61.9
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 1.3e-88 331.6 305 60.3
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 1.3e-88 331.6 305 60.3
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 1.3e-88 331.6 305 60.3
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 1.3e-88 331.6 295 65.8
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.7e-88 331.3 313 60.1
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 2.2e-88 330.9 244 70.9
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 2.8e-88 330.5 244 70.9
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 3.7e-88 330.1 306 59.2
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 8.3e-88 328.9 241 70.5
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 9.2e-87 325.5 329 57.8
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 1.6e-86 324.7 305 58.4
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 1.6e-86 324.7 255 65.5
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 4.5e-86 323.2 332 56.0
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 1.3e-85 321.6 248 66.9
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 1.3e-85 321.6 255 67.8
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 2.9e-85 320.5 297 59.6
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 2.9e-85 320.5 235 68.5
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 6.6e-85 319.3 313 58.1
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 8.6e-85 318.9 309 57.9
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 1.9e-84 317.8 308 56.8
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 4.3e-84 316.6 289 62.6
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 2.1e-83 314.3 306 57.2
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 2.8e-83 313.9 241 71.4
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 2.2e-80 304.3 304 56.2
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 3.7e-80 303.5 315 56.2
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 5.6e-76 289.7 291 58.4
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 7.3e-76 289.3 324 50.6
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 1.5e-73 281.6 172 81.4
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 2.4e-58 231.1 167 70.7
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 3.4e-57 227.3 315 47.9
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 9.9e-57 225.7 169 71.0
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 3.0e-53 214.2 305 43.9
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 3.3e-44 184.1 214 47.7
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 1.1e-36 159.1 219 42.5
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 9.6e-36 156.0 185 47.6
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 2.1e-30 138.3 312 34.9
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 1.6e-27 128.6 313 33.2
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 1.1e-23 115.9 180 36.7
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 4.2e-23 114.0 172 38.4
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 2.5e-20 104.8 76 71.1
Pp3c11_21930 Physcomitrium patens HOM05D006705 ORTHO05D008179 9.1e-10 69.7 298 25.5
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 3.4e-09 67.8 37 83.8
Nitab4.5_0002710g0130 Nicotiana tabacum HOM05D006705 ORTHO05D008179 5.9e-09 67.0 37 78.4
Gohir.D06G036701 Gossypium hirsutum HOM05D006705 ORTHO05D008179 5.0e-08 63.9 36 77.8
Gorai.010G041000 Gossypium raimondii HOM05D006705 ORTHO05D008179 5.0e-08 63.9 36 77.8
Gohir.D05G336850 Gossypium hirsutum HOM05D006705 ORTHO05D008179 1.1e-07 62.8 36 75.0
CDE02G4098 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.9e-07 62.0 36 75.0
Medtr7g056613 Medicago truncatula HOM05D001779 ORTHO05D001753 7.2e-07 60.1 171 31.0
MBI13_g23885_MAGBIO Magnolia biondii HOM05D007456 ORTHO05D009411 1.2e-06 59.3 70 40.0
TAR626G0960 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.1e-06 58.5 196 29.6
EL10Ac9g20676 Beta vulgaris HOM05D002479 ORTHO05D002675 2.7e-06 58.2 104 31.7
Gohir.D06G157800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 2.7e-06 58.2 36 72.2
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 6.1e-06 57.0 111 32.4
QL03p001061 Quercus lobata HOM05D000001 ORTHO05D000003 7.9e-06 56.6 155 25.8
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 7.9e-06 56.6 88 37.5


User provided reference genes

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