Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 8.0e-76 287.3 182 100.0
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 1.6e-71 273.1 136 100.0
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 7.5e-66 254.2 136 90.4
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 2.9e-62 242.3 136 84.6
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 3.8e-62 241.9 136 86.8
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 5.0e-62 241.5 135 87.4
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 1.5e-61 240.0 136 84.6
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 5.6e-61 238.0 176 85.2
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 9.5e-61 237.3 136 83.1
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 1.6e-60 236.5 135 82.2
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 1.6e-60 236.5 136 83.1
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 2.1e-60 236.1 134 83.6
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 2.1e-60 236.1 134 83.6
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 3.6e-60 235.3 135 83.7
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 3.6e-60 235.3 136 83.1
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 6.1e-60 234.6 136 81.6
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 1.8e-59 233.0 135 81.5
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 1.8e-59 233.0 134 82.1
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 2.3e-59 232.6 136 80.1
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 5.2e-59 231.5 136 80.1
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 5.2e-59 231.5 133 82.0
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 5.2e-59 231.5 134 81.3
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 5.2e-59 231.5 134 81.3
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 6.8e-59 231.1 134 80.6
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 1.2e-58 230.3 136 82.4
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 1.5e-58 229.9 134 80.6
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 2.0e-58 229.6 135 80.0
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 5.7e-58 228.0 136 78.7
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 7.5e-58 227.6 136 79.4
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 1.3e-57 226.9 131 82.4
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 1.3e-57 226.9 136 78.7
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 2.2e-57 226.1 136 77.2
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 2.2e-57 226.1 136 78.7
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 2.9e-57 225.7 136 77.2
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 2.9e-57 225.7 136 76.5
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 3.7e-57 225.3 135 79.3
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 3.7e-57 225.3 135 78.5
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 3.7e-57 225.3 136 77.2
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 6.4e-57 224.6 135 77.0
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 8.3e-57 224.2 177 80.8
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 1.1e-56 223.8 136 76.5
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.4e-56 223.4 136 76.5
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 1.8e-56 223.0 136 76.5
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 2.4e-56 222.6 136 78.7
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 3.2e-56 222.2 136 77.2
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 3.2e-56 222.2 136 79.4
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 1.2e-55 220.3 136 75.7
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 2.0e-55 219.5 136 78.7
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 2.7e-55 219.2 135 78.5
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 4.6e-55 218.4 137 79.6
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 4.6e-55 218.4 136 75.7
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 5.9e-55 218.0 136 74.3
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 1.0e-54 217.2 177 79.7
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 1.0e-54 217.2 134 73.9
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 1.3e-54 216.9 136 76.5
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 1.7e-54 216.5 134 76.1
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 1.7e-54 216.5 136 74.3
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 2.3e-54 216.1 136 74.3
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 2.3e-54 216.1 136 77.2
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 2.3e-54 216.1 131 77.1
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 2.3e-54 216.1 135 73.3
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 3.0e-54 215.7 133 74.4
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 6.6e-54 214.5 136 73.5
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 8.6e-54 214.2 135 74.1
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 9.5e-53 210.7 136 73.5
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 2.1e-52 209.5 136 72.8
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 1.0e-51 207.2 136 72.1
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 1.0e-51 207.2 136 72.8
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 1.0e-51 207.2 136 72.1
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 3.1e-51 205.7 136 70.6
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 4.0e-51 205.3 134 72.4
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 5.2e-51 204.9 135 71.9
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 5.2e-51 204.9 136 68.4
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 5.2e-51 204.9 132 72.7
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 8.9e-51 204.1 136 68.4
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 1.2e-50 203.8 136 69.1
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 1.5e-50 203.4 136 69.1
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 2.0e-50 203.0 136 69.1
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 4.4e-50 201.8 136 75.0
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 4.4e-50 201.8 134 68.7
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 9.8e-50 200.7 136 75.0
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 1.3e-49 200.3 136 74.3
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 1.3e-49 200.3 136 74.3
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 1.3e-49 200.3 136 68.4
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 1.7e-49 199.9 136 75.0
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 1.7e-49 199.9 136 74.3
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 2.2e-49 199.5 136 74.3
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 2.2e-49 199.5 136 74.3
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 4.9e-49 198.4 115 80.0
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 8.3e-49 197.6 136 73.5
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 8.3e-49 197.6 137 73.0
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 1.1e-48 197.2 148 65.5
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 2.4e-48 196.1 136 66.9
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 3.2e-48 195.7 134 73.1
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 1.2e-47 193.7 135 72.6
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 2.7e-47 192.6 134 68.7
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 6.0e-47 191.4 134 68.7
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 2.3e-46 189.5 136 65.4
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 1.2e-44 183.7 132 68.2
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 1.5e-42 176.8 129 66.7
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 1.9e-40 169.9 115 73.9
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 8.1e-28 127.9 79 74.7
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 2.0e-26 123.2 82 73.2
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 1.2e-23 114.0 78 71.8
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 1.8e-19 100.1 108 42.6
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 9.0e-19 97.8 57 78.9
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 4.5e-18 95.5 111 43.2
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 6.2e-12 75.1 109 31.2
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 7.6e-10 68.2 151 33.1
Lj5g0013792 Lotus japonicus HOM05D006642 ORTHO05D008856 8.4e-09 64.7 48 60.4
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 7.1e-08 61.6 42 71.4


User provided reference genes

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