Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15551 Nelumbo nucifera HOM05D001169 ORTHO05D001002 7.4e-58 226.9 105 100.0
Nn2g15554 Nelumbo nucifera HOM05D001169 ORTHO05D001002 4.8e-49 197.6 94 96.8
Nn2g15559 Nelumbo nucifera HOM05D001169 ORTHO05D001002 2.4e-40 168.7 85 91.8
Nn2g15557 Nelumbo nucifera HOM05D001169 ORTHO05D001002 2.6e-26 122.1 95 67.4
Nn2g15565 Nelumbo nucifera HOM05D001169 ORTHO05D001002 2.1e-12 75.9 94 43.6
Nn2g14499 Nelumbo nucifera HOM05D001169 ORTHO05D001002 4.7e-12 74.7 90 47.8
Nn2g15569 Nelumbo nucifera HOM05D001169 ORTHO05D001002 6.1e-12 74.3 89 49.4
Nn2g15623 Nelumbo nucifera HOM05D001169 ORTHO05D001002 8.0e-12 73.9 90 52.2
Nn2g15549 Nelumbo nucifera HOM05D001169 ORTHO05D001002 1.4e-11 73.2 80 50.0
Nn8g40636 Nelumbo nucifera HOM05D001169 ORTHO05D001002 4.0e-11 71.6 87 49.4
Nn2g15541 Nelumbo nucifera HOM05D001169 ORTHO05D001002 5.2e-11 71.2 84 47.6
Nn7g36070 Nelumbo nucifera HOM05D001169 ORTHO05D001002 5.2e-11 71.2 95 43.2
Nn6g31633 Nelumbo nucifera HOM05D001169 ORTHO05D001002 8.8e-11 70.5 85 48.2
Lj2A373T41 Lonicera japonica HOM05D001169 ORTHO05D001002 1.2e-10 70.1 82 46.3
Nn2g15546 Nelumbo nucifera HOM05D001169 ORTHO05D001002 2.0e-10 69.3 82 46.3
Nn2g15547 Nelumbo nucifera HOM05D001169 ORTHO05D001002 2.6e-10 68.9 83 54.2
SGA_v2.0_scaffold79G25629 Striga asiatica HOM05D001169 ORTHO05D001002 4.4e-10 68.2 77 37.7
Nn2g15562 Nelumbo nucifera HOM05D001169 ORTHO05D001002 5.7e-10 67.8 83 53.0
Nn7g36069 Nelumbo nucifera HOM05D001169 ORTHO05D001002 7.5e-10 67.4 78 48.7
MBI01_g15745_MAGBIO Magnolia biondii HOM05D001169 ORTHO05D001002 9.8e-10 67.0 76 47.4
Nn2g15553 Nelumbo nucifera HOM05D001169 ORTHO05D001002 9.8e-10 67.0 83 53.0
Nn2g15556 Nelumbo nucifera HOM05D001169 ORTHO05D001002 9.8e-10 67.0 83 53.0
Nn2g15538 Nelumbo nucifera HOM05D001169 ORTHO05D001002 1.3e-09 66.6 81 46.9
Nn2g15544 Nelumbo nucifera HOM05D001169 ORTHO05D001002 1.3e-09 66.6 73 50.7
Nn2g15545 Nelumbo nucifera HOM05D001169 ORTHO05D001002 1.7e-09 66.2 85 44.7
Nn7g37946 Nelumbo nucifera HOM05D001169 ORTHO05D001002 2.8e-09 65.5 73 52.1
Hma1.2p1_1575F.1_g291590 Hydrangea macrophylla HOM05D001169 ORTHO05D001002 3.7e-09 65.1 78 47.4
PSO675G6661 Papaver somniferum HOM05D001169 ORTHO05D001002 3.7e-09 65.1 77 45.5
Ciclev10032086m.g Citrus clementina HOM05D001169 ORTHO05D001002 4.9e-09 64.7 74 44.6
Nn4g23944 Nelumbo nucifera HOM05D001169 ORTHO05D001002 8.3e-09 63.9 85 47.1
Nn2g15543 Nelumbo nucifera HOM05D001169 ORTHO05D001002 1.4e-08 63.2 80 47.5
PSO063G5344 Papaver somniferum HOM05D001169 ORTHO05D001002 1.4e-08 63.2 89 38.2
PSO170G0427 Papaver somniferum HOM05D001169 ORTHO05D001002 1.4e-08 63.2 77 44.2
PSO017G6595 Papaver somniferum HOM05D001169 ORTHO05D001002 2.4e-08 62.4 89 39.3
Thecc.05G167300 Theobroma cacao HOM05D001169 ORTHO05D001002 2.4e-08 62.4 75 42.7
Ca_08500_v3 Cicer arietinum L. HOM05D001169 ORTHO05D001002 4.1e-08 61.6 79 38.0
Nn7g37947 Nelumbo nucifera HOM05D001169 ORTHO05D001002 4.1e-08 61.6 75 49.3
GSVIVG01033370001 Vitis vinifera HOM05D001169 ORTHO05D001002 4.1e-08 61.6 78 42.3
Aa31LG11G7730 Aethionema arabicum HOM05D001169 ORTHO05D001002 5.4e-08 61.2 81 42.0
CARHR206310 Cardamine hirsuta HOM05D001169 ORTHO05D001002 5.4e-08 61.2 80 40.0
Haze_19943 Corylus avellana HOM05D001169 ORTHO05D001002 5.4e-08 61.2 83 37.3
Carub.0006s0577 Capsella rubella HOM05D001169 ORTHO05D001002 9.2e-08 60.5 80 42.5
DCAR_013563 Daucus carota HOM05D001169 ORTHO05D001002 9.2e-08 60.5 77 40.3
Ah.04g152210 Amaranthus hybridus HOM05D001169 ORTHO05D001002 1.2e-07 60.1 85 36.5
Ca_08499_v3 Cicer arietinum L. HOM05D001169 ORTHO05D001002 1.2e-07 60.1 75 38.7
Nitab4.5_0000016g0160 Nicotiana tabacum HOM05D001169 ORTHO05D001002 1.6e-07 59.7 81 39.5
Cpa.g.sc16.41 Carica papaya HOM05D001169 ORTHO05D001002 2.0e-07 59.3 85 37.6
Hund24765 Selenicereus undatus HOM05D001169 ORTHO05D001002 2.0e-07 59.3 89 36.0
AL6G17000 Arabidopsis lyrata HOM05D001169 ORTHO05D001002 2.7e-07 58.9 74 41.9
PSO017G5062 Papaver somniferum HOM05D001169 ORTHO05D001002 2.7e-07 58.9 87 40.2
TAR623G0099 Trochodendron aralioides HOM05D001169 ORTHO05D001002 3.5e-07 58.5 79 41.8
TAR623G1144 Trochodendron aralioides HOM05D001169 ORTHO05D001002 3.5e-07 58.5 79 41.8
AL6G16980 Arabidopsis lyrata HOM05D001169 ORTHO05D001002 4.5e-07 58.2 80 38.8
MELO3C016384.2 Cucumis melo HOM05D001169 ORTHO05D001002 4.5e-07 58.2 65 40.0
vmacro07941 Vaccinium macrocarpon HOM05D001169 ORTHO05D001002 4.5e-07 58.2 78 39.7
AT5G06870 Arabidopsis thaliana HOM05D001169 ORTHO05D001002 5.9e-07 57.8 74 41.9
A03p02990 Brassica napus HOM05D001169 ORTHO05D001002 5.9e-07 57.8 79 40.5
BraA03t09658Z Brassica rapa HOM05D001169 ORTHO05D001002 5.9e-07 57.8 79 40.5
arahy.Tifrunner.gnm1.ann1.IATE2P Arachis hypogaea HOM05D001169 ORTHO05D001002 7.7e-07 57.4 81 39.5
BcaC06g32534 Brassica carinata HOM05D001169 ORTHO05D001002 7.7e-07 57.4 80 36.2
Thhalv10014077m.g Eutrema salsugineum HOM05D001169 ORTHO05D001002 1.0e-06 57.0 80 38.8
Medtr7g092740 Medicago truncatula HOM05D001169 ORTHO05D001002 1.0e-06 57.0 85 41.2
Nn2g15540 Nelumbo nucifera HOM05D001169 ORTHO05D001002 1.0e-06 57.0 82 41.5
Lsat_1_v5_gn_9_28061 Lactuca sativa HOM05D001169 ORTHO05D001002 1.7e-06 56.2 80 36.2
Nitab4.5_0005438g0010 Nicotiana tabacum HOM05D001169 ORTHO05D001002 1.7e-06 56.2 81 37.0
Carub.0006s0579 Capsella rubella HOM05D001169 ORTHO05D001002 2.3e-06 55.8 74 41.9
Psat3g069920 Pisum sativum HOM05D001169 ORTHO05D001002 2.3e-06 55.8 77 40.3
AT5G06860 Arabidopsis thaliana HOM05D001169 ORTHO05D001002 2.9e-06 55.5 81 37.0
CANSAT64G2511 Cannabis sativa HOM05D001169 ORTHO05D001002 2.9e-06 55.5 77 39.0
FAN14G2294 Fragaria x ananassa HOM05D001169 ORTHO05D001002 2.9e-06 55.5 85 38.8
Lalb_Chr18g0047631 Lupinus albus HOM05D001169 ORTHO05D001002 2.9e-06 55.5 79 38.0
Sed0010185 Sechium edule HOM05D001169 ORTHO05D001002 2.9e-06 55.5 60 45.0
A10p29470 Brassica napus HOM05D001169 ORTHO05D001002 3.8e-06 55.1 74 36.5
Cpa.g.sc85.96 Carica papaya HOM05D001169 ORTHO05D001002 3.8e-06 55.1 81 37.0
Cfa016889 Carpinus fangiana HOM05D001169 ORTHO05D001002 3.8e-06 55.1 72 38.9
Medtr7g092730 Medicago truncatula HOM05D001169 ORTHO05D001002 3.8e-06 55.1 59 44.1
Sc19g0006920 Simmondsia chinensis HOM05D001169 ORTHO05D001002 3.8e-06 55.1 55 43.6
THA.LOC104826763 Tarenaya hassleriana HOM05D001169 ORTHO05D001002 3.8e-06 55.1 58 48.3
TPR.G23150 Trifolium pratense HOM05D001169 ORTHO05D001002 3.8e-06 55.1 74 40.5
BcaB01g06010 Brassica carinata HOM05D001169 ORTHO05D001002 5.0e-06 54.7 73 41.1
A10p29490 Brassica napus HOM05D001169 ORTHO05D001002 5.0e-06 54.7 80 37.5
A10p29500 Brassica napus HOM05D001169 ORTHO05D001002 5.0e-06 54.7 80 37.5
C09p69850 Brassica napus HOM05D001169 ORTHO05D001002 5.0e-06 54.7 68 39.7
BolC9t59729H Brassica oleracea HOM05D001169 ORTHO05D001002 5.0e-06 54.7 68 39.7
BraA10t44993Z Brassica rapa HOM05D001169 ORTHO05D001002 5.0e-06 54.7 80 37.5
BraA10t44994Z Brassica rapa HOM05D001169 ORTHO05D001002 5.0e-06 54.7 80 37.5
Migut.J01805 Erythranthe guttata HOM05D000016 ORTHO05D000433 5.0e-06 54.7 86 40.7
THA.LOC104809922 Tarenaya hassleriana HOM05D001169 ORTHO05D001002 5.0e-06 54.7 72 47.2
C09p69870 Brassica napus HOM05D001169 ORTHO05D001002 6.6e-06 54.3 80 37.5
BolC9t59731H Brassica oleracea HOM05D001169 ORTHO05D001002 6.6e-06 54.3 80 37.5
BraA10t44991Z Brassica rapa HOM05D001169 ORTHO05D001002 6.6e-06 54.3 74 36.5
CARHR206290 Cardamine hirsuta HOM05D001169 ORTHO05D001002 6.6e-06 54.3 89 39.3
Duzib106G1437 Durio zibethinus HOM05D001169 ORTHO05D001002 6.6e-06 54.3 80 38.8
Thhalv10021132m.g Eutrema salsugineum HOM05D001169 ORTHO05D001002 6.6e-06 54.3 76 46.1
Lsat_1_v5_gn_9_28081 Lactuca sativa HOM05D001169 ORTHO05D001002 6.6e-06 54.3 80 37.5
Psat3g047600 Pisum sativum HOM05D001169 ORTHO05D001002 6.6e-06 54.3 66 39.4
THA.LOC104826764 Tarenaya hassleriana HOM05D001169 ORTHO05D001002 6.6e-06 54.3 79 34.2
BcaB01g06016 Brassica carinata HOM05D001169 ORTHO05D001002 8.6e-06 53.9 74 40.5
C03p03400 Brassica napus HOM05D001169 ORTHO05D001002 8.6e-06 53.9 74 40.5
Lalb_Chr01g0010751 Lupinus albus HOM05D001169 ORTHO05D001002 8.6e-06 53.9 74 37.8
Medtr2g461310 Medicago truncatula HOM05D001169 ORTHO05D001002 8.6e-06 53.9 89 36.0


User provided reference genes

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