Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001169', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001169' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001169' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001169' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001169' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001169', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001169' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001169' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001169' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001169' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001169', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001169' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001169' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001169' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001169' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001169', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001169' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001169', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '530', 'num_species' => '88' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' ) ), 'genes' => array( 'A03p02980' => 'bna', 'A03p02990' => 'bna', 'A03p03020' => 'bna', 'A05p37160' => 'bna', 'A05p37170' => 'bna', 'A05p37180' => 'bna', 'A05p37190' => 'bna', 'A10p29460' => 'bna', 'A10p29470' => 'bna', 'A10p29480' => 'bna', 'A10p29490' => 'bna', 'A10p29500' => 'bna', 'Aa31LG11G7730' => 'aar', 'Aa31LG3G6350' => 'aar', 'Actinidia39875' => 'ach', 'Ah.04g152160' => 'amhyb', 'Ah.04g152180' => 'amhyb', 'Ah.04g152190' => 'amhyb', 'Ah.04g152210' => 'amhyb', 'Ah.04g152220' => 'amhyb', 'Ah.04g152230' => 'amhyb', 'Ah.04g162780' => 'amhyb', 'Ah.13g076120' => 'amhyb', 'AL3G23810' => 'aly', 'AL3G23820' => 'aly', 'AL6G16980' => 'aly', 'AL6G17000' => 'aly', 'arahy.Tifrunner.gnm1.ann1.0WT4Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.291MZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.81VLYB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X1AFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ENB4BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G4Y2Y5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IATE2P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JK6VL5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L0RB90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L5HZ8F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U8XEFG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UI4LUT' => 'arhy', 'AT3G12145' => 'ath', 'AT5G06860' => 'ath', 'AT5G06870' => 'ath', 'ATR0605G049' => 'atr', 'ATR0605G105' => 'atr', 'ATR0605G238' => 'atr', 'AUR62000026' => 'cqu', 'AUR62012077' => 'cqu', 'AUR62012078' => 'cqu', 'AUR62019197' => 'cqu', 'AUR62019219' => 'cqu', 'AUR62024339' => 'cqu', 'AUR62024340' => 'cqu', 'AUR62024341' => 'cqu', 'AUR62024342' => 'cqu', 'AUR62024344' => 'cqu', 'AUR62024345' => 'cqu', 'AUR62024346' => 'cqu', 'AUR62024347' => 'cqu', 'AUR62024350' => 'cqu', 'AUR62024352' => 'cqu', 'AUR62024353' => 'cqu', 'AUR62024354' => 'cqu', 'AUR62024355' => 'cqu', 'AUR62024807' => 'cqu', 'AUR62025948' => 'cqu', 'AUR62025949' => 'cqu', 'AUR62025950' => 'cqu', 'AUR62025951' => 'cqu', 'AUR62025954' => 'cqu', 'AUR62025955' => 'cqu', 'AUR62025957' => 'cqu', 'BcaB01g05707' => 'bca', 'BcaB01g06010' => 'bca', 'BcaB01g06016' => 'bca', 'BcaB01g06017' => 'bca', 'BcaB04g21093' => 'bca', 'BcaB05g21642' => 'bca', 'BcaC03g13950' => 'bca', 'BcaC05g29278' => 'bca', 'BcaC05g29280' => 'bca', 'BcaC05g29281' => 'bca', 'BcaC05g29282' => 'bca', 'BcaC05g29284' => 'bca', 'BcaC06g32403' => 'bca', 'BcaC06g32404' => 'bca', 'BcaC06g32405' => 'bca', 'BcaC06g32406' => 'bca', 'BcaC06g32533' => 'bca', 'BcaC06g32534' => 'bca', 'BcaC06g32535' => 'bca', 'BcaC09g48218' => 'bca', 'BolC1t05260H' => 'bol', 'BolC2t06252H' => 'bol', 'BolC2t07234H' => 'bol', 'BolC3t12880H' => 'bol', 'BolC3t12881H' => 'bol', 'BolC5t34228H' => 'bol', 'BolC5t34229H' => 'bol', 'BolC5t34230H' => 'bol', 'BolC5t34232H' => 'bol', 'BolC9t59728H' => 'bol', 'BolC9t59729H' => 'bol', 'BolC9t59730H' => 'bol', 'BolC9t59731H' => 'bol', 'BraA02t04896Z' => 'bra', 'BraA03t09657Z' => 'bra', 'BraA03t09658Z' => 'bra', 'BraA03t09659Z' => 'bra', 'BraA03t09660Z' => 'bra', 'BraA05t22514Z' => 'bra', 'BraA05t22515Z' => 'bra', 'BraA05t22516Z' => 'bra', 'BraA10t44990Z' => 'bra', 'BraA10t44991Z' => 'bra', 'BraA10t44992Z' => 'bra', 'BraA10t44993Z' => 'bra', 'BraA10t44994Z' => 'bra', 'C01p53140' => 'bna', 'C02p02880' => 'bna', 'C03p03390' => 'bna', 'C03p03400' => 'bna', 'C05p55590' => 'bna', 'C05p55600' => 'bna', 'C05p55610' => 'bna', 'C05p55630' => 'bna', 'C09p69840' => 'bna', 'C09p69850' => 'bna', 'C09p69860' => 'bna', 'C09p69870' => 'bna', 'CAN.G1424.8' => 'can', 'CAN.G206.138' => 'can', 'CAN.G608.14' => 'can', 'CAN.G65.144' => 'can', 'CANSAT64G0555' => 'cansat', 'CANSAT64G0604' => 'cansat', 'CANSAT64G0730' => 'cansat', 'CANSAT64G1672' => 'cansat', 'CANSAT64G1993' => 'cansat', 'CANSAT64G2309' => 'cansat', 'CANSAT64G2511' => 'cansat', 'CANSAT64G2554' => 'cansat', 'CARHR086720' => 'chi', 'CARHR206270' => 'chi', 'CARHR206280' => 'chi', 'CARHR206290' => 'chi', 'CARHR206300' => 'chi', 'CARHR206310' => 'chi', 'Carub.0003s1150' => 'cru', 'Carub.0003s1151' => 'cru', 'Carub.0006s0575' => 'cru', 'Carub.0006s0577' => 'cru', 'Carub.0006s0579' => 'cru', 'Carub.0006s0580' => 'cru', 'Ca_08499_v3' => 'car', 'Ca_08500_v3' => 'car', 'Ca_13250_v3' => 'car', 'Ca_18307_v3' => 'car', 'Ca_18308_v3' => 'car', 'Cc06_g16270' => 'ccan', 'Cc06_g16280' => 'ccan', 'Cc06_g16290' => 'ccan', 'Cc06_g16300' => 'ccan', 'CDE07G1181' => 'cde', 'Cfa016889' => 'cfa', 'Ciclev10032086m.g' => 'ccl', 'CiPaw.10G028600' => 'cil', 'ClCG04G000300' => 'cla', 'ClCG04G000320' => 'cla', 'COL.COLO4_36120' => 'col', 'Cpa.g.sc16.41' => 'cpa', 'Cpa.g.sc85.96' => 'cpa', 'CsaV3_4G005640' => 'csa', 'CsaV3_4G010610' => 'csa', 'CSS0004886' => 'camsi', 'CSS0006553' => 'camsi', 'CSS0025282' => 'camsi', 'CSS0025407' => 'camsi', 'CSS0029233' => 'camsi', 'DCAR_013562' => 'dca', 'DCAR_013563' => 'dca', 'DCAR_017029' => 'dca', 'DCAR_017030' => 'dca', 'DCAR_029627' => 'dca', 'Dinv24097' => 'din', 'Duzib106G1437' => 'dzi', 'ECA236G3995' => 'eca', 'EL10Ac3g06960' => 'bvu', 'EL10Ac3g06961' => 'bvu', 'EL10Ac3g06964' => 'bvu', 'EL10Ac3g06966' => 'bvu', 'EL10Ac3g06968' => 'bvu', 'EL10Ac3g06970' => 'bvu', 'EL10Ac3g06973' => 'bvu', 'EL10Ac4g07807' => 'bvu', 'EL10Ac4g07808' => 'bvu', 'EL10Ac4g07809' => 'bvu', 'EL10Ac4g09891' => 'bvu', 'Eucgr.A02426' => 'egr', 'Eucgr.A02430' => 'egr', 'Eucgr.A02432' => 'egr', 'Eucgr.A02433' => 'egr', 'Eucgr.L03719' => 'egr', 'FAN02G2473' => 'fan', 'FAN02G4408' => 'fan', 'FAN05G4501' => 'fan', 'FAN14G1472' => 'fan', 'FAN14G2294' => 'fan', 'FvH4_6g22790' => 'fve', 'FvH4_6g22810' => 'fve', 'FvH4_7g14120' => 'fve', 'Glyma.05G123700' => 'gma', 'Glyma.05G123900' => 'gma', 'Glyma.05G124000' => 'gma', 'Glyma.08G078800' => 'gma', 'Glyma.08G078900' => 'gma', 'Glyma.08G079100' => 'gma', 'Glyma.08G079200' => 'gma', 'Glyma.15G209200' => 'gma', 'Glyma.15G209300' => 'gma', 'Glyma.19G145200' => 'gma', 'Gohir.A09G126200' => 'ghi', 'Gorai.002G264800' => 'gra', 'Gorai.006G140800' => 'gra', 'GSVIVG01032044001' => 'vvi', 'GSVIVG01033370001' => 'vvi', 'HanXRQChr01g0018621' => 'han', 'HanXRQChr05g0132801' => 'han', 'HanXRQChr10g0291371' => 'han', 'HanXRQChr10g0298271' => 'han', 'Haze_19943' => 'cav', 'Hma1.2p1_0812F.1_g222210' => 'hma', 'Hma1.2p1_1575F.1_g291570' => 'hma', 'Hma1.2p1_1575F.1_g291590' => 'hma', 'Hma1.2p1_1575F.1_g291600' => 'hma', 'Hma1.2p1_1575F.1_g291610' => 'hma', 'Hma1.2p1_1745F.1_g300270' => 'hma', 'HPP92_007467' => 'vpl', 'HPP92_015471' => 'vpl', 'HPP92_015672' => 'vpl', 'HPP92_015762' => 'vpl', 'Hund09541' => 'sun', 'Hund19181' => 'sun', 'Hund19182' => 'sun', 'Hund19183' => 'sun', 'Hund19184' => 'sun', 'Hund24754' => 'sun', 'Hund24762' => 'sun', 'Hund24763' => 'sun', 'Hund24765' => 'sun', 'Hund24769' => 'sun', 'Hund24770' => 'sun', 'Hund24771' => 'sun', 'Hund24772' => 'sun', 'Hund24776' => 'sun', 'Hund24778' => 'sun', 'Hund24801' => 'sun', 'Hund24802' => 'sun', 'Hund24803' => 'sun', 'Lalb_Chr01g0010751' => 'lal', 'Lalb_Chr03g0036591' => 'lal', 'Lalb_Chr07g0189131' => 'lal', 'Lalb_Chr18g0047631' => 'lal', 'Lj1g0017845' => 'lja', 'Lj1g0020283' => 'lja', 'Lj1g0027066' => 'lja', 'Lj1g0027856' => 'lja', 'Lj2A373T41' => 'lonja', 'Lj4g0004655' => 'lja', 'Lj4g0005105' => 'lja', 'Lj4g0010742' => 'lja', 'Lj9A628T61' => 'lonja', 'Lsat_1_v5_gn_1_71580' => 'lsa', 'Lsat_1_v5_gn_1_71600' => 'lsa', 'Lsat_1_v5_gn_4_140521' => 'lsa', 'Lsat_1_v5_gn_8_79221' => 'lsa', 'Lsat_1_v5_gn_9_28061' => 'lsa', 'Lsat_1_v5_gn_9_28081' => 'lsa', 'Manes.09G031400' => 'mes', 'Manes.09G031500' => 'mes', 'MBI01_g15745_MAGBIO' => 'mbi', 'MBI04_g14270_MAGBIO' => 'mbi', 'MD14G1062500' => 'mdo', 'MD14G1062600' => 'mdo', 'Medtr1g047950' => 'mtr', 'Medtr1g047960' => 'mtr', 'Medtr2g461310' => 'mtr', 'Medtr3g437820' => 'mtr', 'Medtr4g094310' => 'mtr', 'Medtr4g094435' => 'mtr', 'Medtr4g094440' => 'mtr', 'Medtr4g094450' => 'mtr', 'Medtr7g006870' => 'mtr', 'Medtr7g023590' => 'mtr', 'Medtr7g023630' => 'mtr', 'Medtr7g023670' => 'mtr', 'Medtr7g023690' => 'mtr', 'Medtr7g023730' => 'mtr', 'Medtr7g023740' => 'mtr', 'Medtr7g033445' => 'mtr', 'Medtr7g033475' => 'mtr', 'Medtr7g092730' => 'mtr', 'Medtr7g092740' => 'mtr', 'Medtr8g466220' => 'mtr', 'MELO3C016384.2' => 'cme', 'MELO3C023163.2' => 'cme', 'Migut.B01340' => 'egut', 'Migut.I00482' => 'egut', 'Migut.I00483' => 'egut', 'Migut.I00484' => 'egut', 'Migut.I00485' => 'egut', 'Migut.J01807' => 'egut', 'Migut.J01808' => 'egut', 'Migut.J01809' => 'egut', 'Migut.J01810' => 'egut', 'Migut.J01811' => 'egut', 'Migut.J01812' => 'egut', 'Migut.J01813' => 'egut', 'Migut.J01814' => 'egut', 'Migut.K00056' => 'egut', 'Migut.N00245' => 'egut', 'MSTRG.4103' => 'ama', 'Nitab4.5_0000016g0160' => 'nta', 'Nitab4.5_0000016g0170' => 'nta', 'Nitab4.5_0000016g0180' => 'nta', 'Nitab4.5_0000871g0030' => 'nta', 'Nitab4.5_0002703g0050' => 'nta', 'Nitab4.5_0005395g0010' => 'nta', 'Nitab4.5_0005438g0010' => 'nta', 'Nn1g08133' => 'nnu', 'Nn2g14499' => 'nnu', 'Nn2g15538' => 'nnu', 'Nn2g15540' => 'nnu', 'Nn2g15541' => 'nnu', 'Nn2g15542' => 'nnu', 'Nn2g15543' => 'nnu', 'Nn2g15544' => 'nnu', 'Nn2g15545' => 'nnu', 'Nn2g15546' => 'nnu', 'Nn2g15547' => 'nnu', 'Nn2g15548' => 'nnu', 'Nn2g15549' => 'nnu', 'Nn2g15551' => 'nnu', 'Nn2g15552' => 'nnu', 'Nn2g15553' => 'nnu', 'Nn2g15554' => 'nnu', 'Nn2g15555' => 'nnu', 'Nn2g15556' => 'nnu', 'Nn2g15557' => 'nnu', 'Nn2g15558' => 'nnu', 'Nn2g15559' => 'nnu', 'Nn2g15561' => 'nnu', 'Nn2g15562' => 'nnu', 'Nn2g15565' => 'nnu', 'Nn2g15567' => 'nnu', 'Nn2g15568' => 'nnu', 'Nn2g15569' => 'nnu', 'Nn2g15623' => 'nnu', 'Nn3g17689' => 'nnu', 'Nn4g23944' => 'nnu', 'Nn4g25951' => 'nnu', 'Nn6g31633' => 'nnu', 'Nn7g36068' => 'nnu', 'Nn7g36069' => 'nnu', 'Nn7g36070' => 'nnu', 'Nn7g36071' => 'nnu', 'Nn7g36072' => 'nnu', 'Nn7g36073' => 'nnu', 'Nn7g37588' => 'nnu', 'Nn7g37946' => 'nnu', 'Nn7g37947' => 'nnu', 'Nn7g37948' => 'nnu', 'Nn7g37949' => 'nnu', 'Nn8g40636' => 'nnu', 'Oeu029218.1' => 'oeu', 'Oeu029219.1' => 'oeu', 'Oeu039099.1' => 'oeu', 'Os03g0436600' => 'osa', 'Os05g0104150' => 'osa', 'Os05g0104200' => 'osa', 'Os05g0104600' => 'osa', 'Os05g0104700' => 'osa', 'Os07g0568700' => 'osa', 'Os08g0510101' => 'osa', 'Os09g0491612' => 'osa', 'Peaxi162Scf00285g00046' => 'pax', 'Peaxi162Scf00285g00047' => 'pax', 'Peaxi162Scf00285g00049' => 'pax', 'Peaxi162Scf00285g00055' => 'pax', 'Peaxi162Scf00285g00422' => 'pax', 'Peaxi162Scf00285g00512' => 'pax', 'PGR004G0059' => 'pgr', 'PGR004G1139' => 'pgr', 'PGR004G1342' => 'pgr', 'PGR004G2349' => 'pgr', 'PGR004G2812' => 'pgr', 'PGSC0003DMG400008492' => 'stu', 'PGSC0003DMG401022197' => 'stu', 'Phvul.001G140000' => 'pvu', 'Phvul.002G201600' => 'pvu', 'Phvul.002G201700' => 'pvu', 'Phvul.002G201800' => 'pvu', 'Phvul.002G201900' => 'pvu', 'Phvul.009G180501' => 'pvu', 'Phvul.011G028800' => 'pvu', 'Potri.006G058500' => 'ptr', 'Potri.006G058600' => 'ptr', 'Potri.016G049400' => 'ptr', 'Potri.016G049600' => 'ptr', 'Prupe.7G072600' => 'ppe', 'Prupe.7G072700' => 'ppe', 'Psat2g098920' => 'psa', 'Psat3g047600' => 'psa', 'Psat3g069920' => 'psa', 'Psat3g153320' => 'psa', 'Psat4g136200' => 'psa', 'Psat6g048520' => 'psa', 'Psat6g048560' => 'psa', 'Psat7g094320' => 'psa', 'Psat7g094360' => 'psa', 'Psat7g094840' => 'psa', 'Psat7g095440' => 'psa', 'PSO017G2084' => 'pso', 'PSO017G5062' => 'pso', 'PSO017G6595' => 'pso', 'PSO049G0001' => 'pso', 'PSO063G1550' => 'pso', 'PSO063G4455' => 'pso', 'PSO063G5344' => 'pso', 'PSO063G6013' => 'pso', 'PSO170G0427' => 'pso', 'PSO170G4921' => 'pso', 'PSO662G0001' => 'pso', 'PSO675G4849' => 'pso', 'PSO675G6661' => 'pso', 'QL07p022693' => 'qlo', 'QL07p022730' => 'qlo', 'QL93p2022_0035' => 'qlo', 'QL93p2022_0173' => 'qlo', 'RcHm_v2.0_Chr3g0480401' => 'rch', 'RcHm_v2.0_Chr3g0480411' => 'rch', 'Rhsim03G0009900' => 'rsi', 'Rhsim03G0010000' => 'rsi', 'Rhsim03G0010100' => 'rsi', 'Rhsim03G0010300' => 'rsi', 'Rhsim03G0010400' => 'rsi', 'Sabra06G0041800' => 'sbr', 'Sabra06G0041900' => 'sbr', 'Sabra16G0053400' => 'sbr', 'SalBow1G2822' => 'sbo', 'SalBow1G5450' => 'sbo', 'SalBow3G0086' => 'sbo', 'SalBow3G0878' => 'sbo', 'SalBow5G1478' => 'sbo', 'SalBow5G3433' => 'sbo', 'SalBow5G3620' => 'sbo', 'SalBow5G4953' => 'sbo', 'SalBow5G5116' => 'sbo', 'SalBow6G0177' => 'sbo', 'SalBow6G0499' => 'sbo', 'SalBow6G2420' => 'sbo', 'SalBow6G3930' => 'sbo', 'SalBow7G3835' => 'sbo', 'Sc19g0006910' => 'sci', 'Sc19g0006920' => 'sci', 'Sc19g0006930' => 'sci', 'Sc21g0000240' => 'sci', 'Sed0009305' => 'sed', 'Sed0010185' => 'sed', 'Sed0015437' => 'sed', 'Sed0015486' => 'sed', 'Sed0017610' => 'sed', 'Sed0025152' => 'sed', 'Sed0027277' => 'sed', 'SEGI_14089' => 'sgi', 'SGA_v2.0_scaffold79G25629' => 'sas', 'Solyc07g065090.2' => 'sly', 'Solyc09g014480.3' => 'sly', 'Solyc09g014590.3' => 'sly', 'Sopen07g033300' => 'spe', 'Sopen09g007290' => 'spe', 'Sopen09g007440' => 'spe', 'Sp3g10380' => 'spa', 'Sp6g35990' => 'spa', 'Sp6g36000' => 'spa', 'TAR623G0099' => 'tar', 'TAR623G1144' => 'tar', 'TAR623G1249' => 'tar', 'TAR633G0395' => 'tar', 'THA.LOC104809922' => 'tha', 'THA.LOC104826763' => 'tha', 'THA.LOC104826764' => 'tha', 'Thecc.05G167200' => 'tca', 'Thecc.05G167300' => 'tca', 'Thhalv10014071m.g' => 'esa', 'Thhalv10014077m.g' => 'esa', 'Thhalv10014115m.g' => 'esa', 'Thhalv10021132m.g' => 'esa', 'TPR.G10371' => 'tpr', 'TPR.G13706' => 'tpr', 'TPR.G19792' => 'tpr', 'TPR.G19812' => 'tpr', 'TPR.G23143' => 'tpr', 'TPR.G23146' => 'tpr', 'TPR.G23150' => 'tpr', 'TPR.G23785' => 'tpr', 'TPR.G23788' => 'tpr', 'TPR.G23793' => 'tpr', 'TPR.G23802' => 'tpr', 'TPR.G23816' => 'tpr', 'TPR.G23837' => 'tpr', 'TPR.G27564' => 'tpr', 'TPR.G31484' => 'tpr', 'TPR.G35407' => 'tpr', 'TPR.G39861' => 'tpr', 'TWI77G0439' => 'twi', 'vmacro07939' => 'vma', 'vmacro07940' => 'vma', 'vmacro07941' => 'vma', 'VMungo0251G0095' => 'vmu', 'VMungo0251G1247' => 'vmu', 'VMungo1309G1909' => 'vmu', 'VMungo1309G2727' => 'vmu', 'VMungo1383G1226' => 'vmu', 'Zm00001eb020600' => 'zma', 'Zm00001eb079860' => 'zma', 'Zm00001eb185380' => 'zma', 'Zm00001eb199890' => 'zma', 'Zm00001eb267480' => 'zma', 'Zm00001eb316780' => 'zma', 'Zm00001eb324700' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001169' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001169' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001169' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001169' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151