Gene: AT5G06870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G06870
  • Transcript Identifier AT5G06870.1
  • Gene Type Coding gene
  • Location Chr5 : 2133941-2135016 : positive

Gene Family Information

  • ID HOM05D001169
  • #Genes/#Species 530/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G06870.1
  • symbol PGIP2
  • Alias ATPGIP2,ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2
  • uniprot Q9M5J8

Descriptions

  • Description polygalacturonase inhibiting protein 2
  • Computational description polygalacturonase inhibiting protein 2 (PGIP2); FUNCTIONS IN: polygalacturonase inhibitor activity; INVOLVED IN: response to salt stress, signal transduction, defense response; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: polygalacturonase inhibiting protein 1 (TAIR:AT5G06860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity
GO:0048833
ISO
PLAZA Integrative Orthologyspecification of floral organ number Os07g0568700
GO:0007165
IC
Gene Ontologysignal transduction1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004857
ISO
PLAZA Integrative Orthologyenzyme inhibitor activity Os07g0568700
GO:0005515
IEA
InterProprotein binding
GO:0090353
IDA
Gene Ontologypolygalacturonase inhibitor activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
Gene Ontologyplant-type cell wall4
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IDA, HDA
Gene Ontologycell wall5 6
GO:0016020
IEA
GOA Databasemembrane
GO:0005829
RCA
Gene Ontologycytosol7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013210 Leucine-rich repeat-containing N-terminal, plant-type
IPR032675 Leucine-rich repeat domain superfamily
IPR001611 Leucine-rich repeat
Mapman id Description
26.9.3.4 External stimuli response.pathogen.defense mechanisms.pathogen polygalacturonase inhibitor (PGIP)