Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13621 Nelumbo nucifera HOM05D000181 ORTHO05D005757 8.6e-109 397.1 218 100.0
Nn2g11391 Nelumbo nucifera HOM05D000181 ORTHO05D005757 3.8e-72 275.4 213 76.5
TAR633G0153 Trochodendron aralioides HOM05D000181 ORTHO05D005757 6.9e-58 228.0 211 68.7
Dinv14464 Davidia involucrata HOM05D000181 ORTHO05D005757 8.1e-51 204.5 206 51.5
CSS0008554 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D005757 2.9e-48 196.1 217 58.1
Lj2A1078G39 Lonicera japonica HOM05D000181 ORTHO05D005757 2.7e-46 189.5 223 57.4
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 7.9e-46 188.0 159 64.8
Aqoxy4G02662 Aquilegia oxysepala HOM05D000181 ORTHO05D005757 2.5e-44 183.0 215 55.8
Cpa.g.sc112.54 Carica papaya HOM05D000181 ORTHO05D005757 5.9e-41 171.8 209 49.8
MBI05_g03462_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D005757 1.3e-40 170.6 205 58.0
Sc12g0000870 Simmondsia chinensis HOM05D000181 ORTHO05D005757 2.2e-40 169.9 209 49.3
CSS0046009 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D005757 5.0e-40 168.7 207 54.1
CiPaw.13G080800 Carya illinoinensis HOM05D000181 ORTHO05D005757 1.4e-39 167.2 209 47.4
ATR0618G289 Amborella trichopoda HOM05D000181 ORTHO05D005757 3.6e-38 162.5 218 42.2
CDE04G0235 Ceratophyllum demersum HOM05D000181 ORTHO05D005757 6.1e-38 161.8 212 55.2
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 9.7e-36 154.5 215 50.7
TWI31G1099 Tripterygium wilfordii HOM05D000181 ORTHO05D005757 1.6e-35 153.7 217 55.3
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 4.8e-35 152.1 196 45.9
Thecc.09G305500 Theobroma cacao HOM05D000181 ORTHO05D005757 1.1e-34 151.0 216 58.3
CANSAT54G2135 Cannabis sativa HOM05D000181 ORTHO05D005757 1.8e-34 150.2 208 48.6
THA.LOC104810725 Tarenaya hassleriana HOM05D000181 ORTHO05D005757 1.0e-32 144.4 211 43.6
vmacro02988 Vaccinium macrocarpon HOM05D000181 ORTHO05D005757 1.3e-32 144.1 233 49.8
Cc01_g13940 Coffea canephora HOM05D000181 ORTHO05D005757 1.7e-32 143.7 209 56.0
Sed0008141 Sechium edule HOM05D000181 ORTHO05D005757 1.1e-31 141.0 211 46.9
CARHR272800 Cardamine hirsuta HOM05D000181 ORTHO05D005757 1.9e-31 140.2 217 41.0
Cfa011653 Carpinus fangiana HOM05D000181 ORTHO05D005757 2.5e-31 139.8 218 53.7
Gohir.D03G117900 Gossypium hirsutum HOM05D000181 ORTHO05D005757 2.5e-31 139.8 216 44.9
Gorai.003G124400 Gossypium raimondii HOM05D000181 ORTHO05D005757 2.5e-31 139.8 216 44.9
Manes.02G121800 Manihot esculenta HOM05D000181 ORTHO05D005757 3.2e-31 139.4 208 49.0
Gohir.A03G049400 Gossypium hirsutum HOM05D000181 ORTHO05D005757 4.2e-31 139.0 216 44.9
AUR62001684 Chenopodium quinoa HOM05D000181 ORTHO05D005757 7.2e-31 138.3 166 64.5
COL.COLO4_19109 Corchorus olitorius HOM05D000181 ORTHO05D005757 7.2e-31 138.3 150 54.7
Oeu009382.1 Olea europaea HOM05D000181 ORTHO05D005757 7.2e-31 138.3 197 45.7
Haze_24257 Corylus avellana HOM05D000181 ORTHO05D005757 9.4e-31 137.9 213 53.1
CsaV3_1G036040 Cucumis sativus L. HOM05D000181 ORTHO05D005757 1.6e-30 137.1 211 45.0
Sopen06g001920 Solanum pennellii HOM05D000181 ORTHO05D005757 1.6e-30 137.1 210 44.8
ClCG03G000890 Citrullus lanatus HOM05D000181 ORTHO05D005757 2.1e-30 136.7 211 44.5
EL10Ac7g16127 Beta vulgaris HOM05D000181 ORTHO05D005757 2.7e-30 136.3 162 64.8
Solyc06g005950.3 Solanum lycopersicum HOM05D000181 ORTHO05D005757 2.7e-30 136.3 210 43.3
PSO339G2545 Papaver somniferum HOM05D000181 ORTHO05D005757 3.6e-30 136.0 213 51.2
Sp5g14670 Schrenkiella parvula HOM05D000181 ORTHO05D005757 3.6e-30 136.0 178 48.3
Prupe.6G060800 Prunus persica HOM05D000181 ORTHO05D005757 4.6e-30 135.6 211 47.4
SGA_v2.0_scaffold39G15251 Striga asiatica HOM05D000181 ORTHO05D005757 4.6e-30 135.6 167 49.7
arahy.Tifrunner.gnm1.ann1.70SKLQ Arachis hypogaea HOM05D000181 ORTHO05D005757 1.4e-29 134.0 218 50.0
Carub.0008s1951 Capsella rubella HOM05D000181 ORTHO05D005757 1.4e-29 134.0 179 45.8
Manes.01G164300 Manihot esculenta HOM05D000181 ORTHO05D005757 1.4e-29 134.0 206 48.1
Aa31LG1G18900 Aethionema arabicum HOM05D000181 ORTHO05D005757 1.8e-29 133.7 180 48.3
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 1.8e-29 133.7 212 45.3
PSO384G0122 Papaver somniferum HOM05D000181 ORTHO05D005757 1.8e-29 133.7 210 52.4
CAN.G483.1 Capsicum annuum HOM05D000181 ORTHO05D005757 2.3e-29 133.3 156 49.4
Gohir.A05G089900 Gossypium hirsutum HOM05D000181 ORTHO05D005757 2.3e-29 133.3 150 53.3
Gohir.D05G090800 Gossypium hirsutum HOM05D000181 ORTHO05D005757 2.3e-29 133.3 80 81.2
Gorai.009G093300 Gossypium raimondii HOM05D000181 ORTHO05D005757 2.3e-29 133.3 80 81.2
Duzib150G0876 Durio zibethinus HOM05D000181 ORTHO05D005757 3.0e-29 132.9 216 43.1
SalBow2G0286 Salvia bowleyana HOM05D000181 ORTHO05D005757 5.1e-29 132.1 204 43.6
Migut.N00882 Erythranthe guttata HOM05D000181 ORTHO05D005757 6.7e-29 131.7 127 63.0
FvH4_3g38190 Fragaria vesca HOM05D000181 ORTHO05D005757 6.7e-29 131.7 80 77.5
FAN11G0623 Fragaria x ananassa HOM05D000181 ORTHO05D005757 6.7e-29 131.7 80 77.5
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 6.7e-29 131.7 80 77.5
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 6.7e-29 131.7 80 77.5
AL8G35200 Arabidopsis lyrata HOM05D000181 ORTHO05D005757 8.8e-29 131.3 211 41.2
HanXRQChr05g0135651 Helianthus annuus HOM05D000181 ORTHO05D005757 8.8e-29 131.3 215 40.9
MD03G1074100 Malus domestica HOM05D000181 ORTHO05D005757 8.8e-29 131.3 219 48.4
Oeu049273.1 Olea europaea HOM05D000181 ORTHO05D005757 8.8e-29 131.3 214 42.1
AL3G40320 Arabidopsis lyrata HOM05D000181 ORTHO05D005757 1.5e-28 130.6 211 41.2
FAN25G0837 Fragaria x ananassa HOM05D000181 ORTHO05D005757 1.5e-28 130.6 80 76.2
DCAR_007391 Daucus carota HOM05D000181 ORTHO05D005757 2.0e-28 130.2 207 50.7
Ah.08g220730 Amaranthus hybridus HOM05D000181 ORTHO05D005757 2.6e-28 129.8 217 49.3
CARHR155660 Cardamine hirsuta HOM05D000181 ORTHO05D005757 2.6e-28 129.8 179 55.9
Thhalv10010128m.g Eutrema salsugineum HOM05D000181 ORTHO05D005757 2.6e-28 129.8 182 55.5
MD11G1080400 Malus domestica HOM05D000181 ORTHO05D005757 4.4e-28 129.0 69 85.5
Atru.chr3.4273 Acer truncatum HOM05D000181 ORTHO05D005757 9.7e-28 127.9 219 51.6
AT5G58870 Arabidopsis thaliana HOM05D000181 ORTHO05D005757 9.7e-28 127.9 211 41.2
Carub.0005s1330 Capsella rubella HOM05D000181 ORTHO05D005757 9.7e-28 127.9 183 45.4
Glyma.02G225300 Glycine max HOM05D000181 ORTHO05D005757 1.3e-27 127.5 81 74.1
RcHm_v2.0_Chr5g0068621 Rosa chinensis HOM05D000181 ORTHO05D005757 1.3e-27 127.5 209 41.6
Peaxi162Scf00216g00037 Petunia axillaris HOM05D000181 ORTHO05D005757 1.7e-27 127.1 80 73.8
arahy.Tifrunner.gnm1.ann1.ND684V Arachis hypogaea HOM05D000181 ORTHO05D005757 2.2e-27 126.7 226 49.1
MSTRG.12663 Avicennia marina HOM05D000181 ORTHO05D005757 2.2e-27 126.7 135 54.1
Nitab4.5_0000102g0170 Nicotiana tabacum HOM05D000181 ORTHO05D005757 2.8e-27 126.3 118 55.1
Sabra09G0030500 Salix brachista HOM05D000181 ORTHO05D005757 2.8e-27 126.3 80 76.2
CiPaw.14G061100 Carya illinoinensis HOM05D000181 ORTHO05D005757 4.8e-27 125.6 211 50.7
Hund04887 Selenicereus undatus HOM05D000181 ORTHO05D005757 1.1e-26 124.4 213 43.2
Glyma.14G192100 Glycine max HOM05D000181 ORTHO05D005757 1.4e-26 124.0 80 73.8
Sp6g20570 Schrenkiella parvula HOM05D000181 ORTHO05D005757 1.4e-26 124.0 181 45.9
Potri.001G249100 Populus trichocarpa HOM05D000181 ORTHO05D005757 1.8e-26 123.6 133 65.4
Nitab4.5_0001970g0080 Nicotiana tabacum HOM05D000181 ORTHO05D005757 2.4e-26 123.2 118 64.4
Ciclev10027831m.g Citrus clementina HOM05D000181 ORTHO05D005757 3.1e-26 122.9 81 77.8
Potri.009G043100 Populus trichocarpa HOM05D000181 ORTHO05D005757 3.1e-26 122.9 79 74.7
unitig_8.g3694 Utricularia gibba HOM05D000181 ORTHO05D005757 3.1e-26 122.9 80 72.5
ECA236G3476 Erigeron canadensis HOM05D000181 ORTHO05D005757 4.1e-26 122.5 120 56.7
Sabra16G0151200 Salix brachista HOM05D000181 ORTHO05D005757 4.1e-26 122.5 133 60.9
QL01p026829 Quercus lobata HOM05D000181 ORTHO05D005757 5.3e-26 122.1 65 87.7
AL5G26300 Arabidopsis lyrata HOM05D000181 ORTHO05D005757 1.5e-25 120.6 69 81.2
BcaC04g19854 Brassica carinata HOM05D000181 ORTHO05D005757 1.5e-25 120.6 213 40.8
LjContig00155g0009316 Lotus japonicus HOM05D000181 ORTHO05D005757 2.0e-25 120.2 83 71.1
Phvul.008G262300 Phaseolus vulgaris HOM05D000181 ORTHO05D005757 2.0e-25 120.2 69 78.3
A06p20470 Brassica napus HOM05D000181 ORTHO05D005757 3.4e-25 119.4 178 57.3
BraA06t25122Z Brassica rapa HOM05D000181 ORTHO05D005757 3.4e-25 119.4 178 57.3
Eucgr.B02274 Eucalyptus grandis HOM05D000181 ORTHO05D005757 3.4e-25 119.4 69 78.3
AT3G47060 Arabidopsis thaliana HOM05D000181 ORTHO05D005757 5.9e-25 118.6 69 81.2
A10p15460 Brassica napus HOM05D000181 ORTHO05D005757 5.9e-25 118.6 81 70.4
C09p51030 Brassica napus HOM05D000181 ORTHO05D005757 7.7e-25 118.2 213 39.9
BolC9t57960H Brassica oleracea HOM05D000181 ORTHO05D005757 7.7e-25 118.2 81 69.1
THA.LOC104814906 Tarenaya hassleriana HOM05D000181 ORTHO05D005757 1.0e-24 117.9 180 53.3
BraA10t43689Z Brassica rapa HOM05D000181 ORTHO05D005757 1.3e-24 117.5 80 68.8
HanXRQChr06g0179431 Helianthus annuus HOM05D000181 ORTHO05D005757 1.3e-24 117.5 212 48.1
Lj6g0028119 Lotus japonicus HOM05D000181 ORTHO05D005757 1.3e-24 117.5 78 73.1
Rhsim13G0072100 Rhododendron simsii HOM05D000181 ORTHO05D005757 1.3e-24 117.5 233 42.9
BcaC01g01859 Brassica carinata HOM05D000181 ORTHO05D005757 1.7e-24 117.1 179 53.1
C03p71290 Brassica napus HOM05D000181 ORTHO05D005757 1.7e-24 117.1 179 53.1
BolC3t19414H Brassica oleracea HOM05D000181 ORTHO05D005757 1.7e-24 117.1 179 52.5
Lalb_Chr04g0252331 Lupinus albus HOM05D000181 ORTHO05D005757 1.7e-24 117.1 68 76.5
Phvul.006G065400 Phaseolus vulgaris HOM05D000181 ORTHO05D005757 3.8e-24 115.9 77 68.8
Ah.04g150050 Amaranthus hybridus HOM05D000181 ORTHO05D005757 8.5e-24 114.8 208 46.6
Ca_05586_v3 Cicer arietinum L. HOM05D000181 ORTHO05D005757 8.5e-24 114.8 73 71.2
VMungo0540G0029 Vigna mungo HOM05D000002 ORTHO05D005757 2.5e-23 113.2 77 67.5
VMungo0647G2397 Vigna mungo HOM05D000181 ORTHO05D005757 2.5e-23 113.2 69 73.9
Lalb_Chr10g0103271 Lupinus albus HOM05D000181 ORTHO05D005757 5.5e-23 112.1 65 80.0
Ca_14910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D005757 9.4e-23 111.3 64 78.1
PGSC0003DMG400004149 Solanum tuberosum HOM05D000181 ORTHO05D005757 2.3e-21 106.7 201 38.8
Glyma.18G065600 Glycine max HOM05D000181 ORTHO05D005757 3.9e-21 105.9 65 69.2
DCAR_005895 Daucus carota HOM05D000181 ORTHO05D005757 3.3e-20 102.8 69 68.1
ATR0723G008 Amborella trichopoda HOM05D000181 ORTHO05D005757 2.8e-19 99.8 146 38.4
Medtr3g462930 Medicago truncatula HOM05D000181 ORTHO05D005757 2.8e-19 99.8 65 63.1
Psat5g162280 Pisum sativum HOM05D000181 ORTHO05D005757 2.8e-19 99.8 81 59.3
Medtr5g069780 Medicago truncatula HOM05D000181 ORTHO05D005757 8.2e-19 98.2 61 77.0
SEGI_03564 Sequoiadendron giganteum HOM05D000181 ORTHO05D005757 1.4e-18 97.4 131 41.2
Os02g0649700 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D005757 2.0e-17 93.6 67 61.2
Zm00001eb248950 Zea mays HOM05D000181 ORTHO05D005757 2.0e-17 93.6 67 61.2
Psat1g066520 Pisum sativum HOM05D000181 ORTHO05D005757 7.7e-17 91.7 61 70.5
Zm00001eb186240 Zea mays HOM05D000181 ORTHO05D005757 7.7e-17 91.7 123 56.1
AUR62020098 Chenopodium quinoa HOM05D000181 ORTHO05D005757 4.7e-14 82.4 43 88.4
SHI05882 Sapria himalayana HOM05D000181 ORTHO05D005757 1.8e-13 80.5 66 53.0
TPR.G24052 Trifolium pratense HOM05D000181 ORTHO05D005757 5.2e-13 79.0 67 56.7
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 8.8e-13 78.2 43 81.4
Pp3c23_7140 Physcomitrium patens HOM05D000181 ORTHO05D005757 1.5e-12 77.4 84 45.2
Pp3c23_7144 Physcomitrium patens HOM05D000181 ORTHO05D005757 1.5e-12 77.4 84 45.2
Lsat_1_v5_gn_8_71240 Lactuca sativa HOM05D000181 ORTHO05D005757 2.6e-12 76.6 43 76.7
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 6.3e-11 72.0 70 50.0
AUR62000942 Chenopodium quinoa HOM05D007147 ORTHO05D009166 1.6e-09 67.4 36 83.3
SMO351G0531 Selaginella moellendorffii HOM05D000181 ORTHO05D005757 3.5e-09 66.2 79 44.3
Mapoly0001s0318 Marchantia polymorpha HOM05D000181 ORTHO05D005757 5.9e-09 65.5 76 42.1
Dinv04672 Davidia involucrata HOM05D000181 ORTHO05D005757 3.8e-08 62.8 43 74.4
CBR_g26107 Chara braunii HOM05D000181 ORTHO05D005757 1.5e-07 60.8 74 45.9


User provided reference genes

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