Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11448 Nelumbo nucifera HOM05D003809 ORTHO05D003935 3.6e-44 181.0 82 100.0
Nn2g11447 Nelumbo nucifera HOM05D003809 ORTHO05D003935 5.1e-38 160.6 75 96.0
TAR623G0913 Trochodendron aralioides HOM05D003809 ORTHO05D003935 7.8e-31 136.7 75 78.7
Atru.chr8.2220 Acer truncatum HOM05D003809 ORTHO05D003935 5.1e-30 134.0 77 71.4
Nn2g13682 Nelumbo nucifera HOM05D003809 ORTHO05D003935 1.5e-29 132.5 75 73.3
GSVIVG01033976001 Vitis vinifera HOM05D003809 ORTHO05D003935 5.6e-29 130.6 77 70.1
Dinv28631 Davidia involucrata HOM05D003809 ORTHO05D003935 9.6e-29 129.8 79 65.8
Cfa017221 Carpinus fangiana HOM05D003809 ORTHO05D003935 1.6e-28 129.0 74 71.6
Cfa017222 Carpinus fangiana HOM05D003809 ORTHO05D003935 1.6e-28 129.0 74 71.6
TAR369G0780 Trochodendron aralioides HOM05D003809 ORTHO05D003935 1.6e-28 129.0 75 72.0
TAR369G1072 Trochodendron aralioides HOM05D003809 ORTHO05D003935 1.6e-28 129.0 75 72.0
CiPaw.09G207900 Carya illinoinensis HOM05D003809 ORTHO05D003935 2.8e-28 128.3 74 71.6
Prupe.6G275300 Prunus persica HOM05D003809 ORTHO05D003935 2.8e-28 128.3 74 73.0
Lalb_Chr03g0043131 Lupinus albus HOM05D003809 ORTHO05D003935 4.8e-28 127.5 74 70.3
Rhsim13G0070300 Rhododendron simsii HOM05D003809 ORTHO05D003935 8.1e-28 126.7 75 66.7
MD04G1150500 Malus domestica HOM05D003809 ORTHO05D003935 1.1e-27 126.3 74 70.3
FAN16G0765 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.4e-27 125.9 79 59.5
FAN21G3156 Fragaria x ananassa HOM05D003809 ORTHO05D003935 2.4e-27 125.2 79 59.5
FAN25G1218 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.4e-27 125.2 79 59.5
MD12G1164600 Malus domestica HOM05D003809 ORTHO05D003935 2.4e-27 125.2 74 70.3
Dinv14451 Davidia involucrata HOM05D003809 ORTHO05D003935 5.3e-27 124.0 79 63.3
Manes.08G091100 Manihot esculenta HOM05D003809 ORTHO05D003935 5.3e-27 124.0 74 68.9
PSO339G2972 Papaver somniferum HOM05D003809 ORTHO05D003935 6.9e-27 123.6 75 65.3
CANSAT35G1529 Cannabis sativa HOM05D003809 ORTHO05D003935 1.2e-26 122.9 72 66.7
FvH4_3g38430 Fragaria vesca HOM05D003809 ORTHO05D003935 1.2e-26 122.9 79 58.2
FAN11G1208 Fragaria x ananassa HOM05D003809 ORTHO05D003935 1.2e-26 122.9 79 58.2
Lj1g0000205 Lotus japonicus HOM05D003809 ORTHO05D003935 1.2e-26 122.9 74 66.2
Thhalv10013736m.g Eutrema salsugineum HOM05D003809 ORTHO05D003935 2.0e-26 122.1 72 68.1
Lalb_Chr01g0022961 Lupinus albus HOM05D003809 ORTHO05D003935 2.0e-26 122.1 74 66.2
BcaNung06532 Brassica carinata HOM05D003809 ORTHO05D003935 2.6e-26 121.7 72 66.7
Sc07g0006540 Simmondsia chinensis HOM05D003809 ORTHO05D003935 2.6e-26 121.7 74 62.2
Manes.09G104500 Manihot esculenta HOM05D003809 ORTHO05D003935 3.4e-26 121.3 74 66.2
Sp6g40590 Schrenkiella parvula HOM05D003809 ORTHO05D003935 3.4e-26 121.3 72 66.7
Glyma.03G063000 Glycine max HOM05D003809 ORTHO05D003935 4.5e-26 120.9 75 64.0
Hma1.2p1_0362F.1_g136090 Hydrangea macrophylla HOM05D003809 ORTHO05D003935 4.5e-26 120.9 74 66.2
BraA03t09429Z Brassica rapa HOM05D003809 ORTHO05D003935 5.8e-26 120.6 72 65.3
Ciclev10011409m.g Citrus clementina HOM05D003809 ORTHO05D003935 5.8e-26 120.6 74 66.2
Duzib128G0737 Durio zibethinus HOM05D003809 ORTHO05D003935 5.8e-26 120.6 74 64.9
FAN02G0645 Fragaria x ananassa HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 66.7
FAN09G2283 Fragaria x ananassa HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 66.7
Glyma.03G061700 Glycine max HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 64.0
Glyma.03G061802 Glycine max HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 64.0
Glyma.03G061852 Glycine max HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 64.0
Glyma.03G062100 Glycine max HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 64.0
Glyma.03G062300 Glycine max HOM05D003809 ORTHO05D003935 5.8e-26 120.6 75 64.0
Aqoxy4G02610 Aquilegia oxysepala HOM05D003809 ORTHO05D003935 7.6e-26 120.2 79 60.8
Lj3A954G70 Lonicera japonica HOM05D003809 ORTHO05D003935 7.6e-26 120.2 74 63.5
Cpa.g.sc112.34 Carica papaya HOM05D003809 ORTHO05D003935 9.9e-26 119.8 74 63.5
Cpa.g.sc163.14 Carica papaya HOM05D003809 ORTHO05D003935 9.9e-26 119.8 74 66.2
TPR.G13325 Trifolium pratense HOM05D003809 ORTHO05D003935 9.9e-26 119.8 74 64.9
Glyma.03G062500 Glycine max HOM05D003809 ORTHO05D003935 1.3e-25 119.4 75 62.7
A03p00380 Brassica napus HOM05D003809 ORTHO05D003935 1.7e-25 119.0 72 63.9
FvH4_6g11650 Fragaria vesca HOM05D003809 ORTHO05D003935 1.7e-25 119.0 75 65.3
FAN14G0248 Fragaria x ananassa HOM05D003809 ORTHO05D003935 1.7e-25 119.0 75 65.3
FAN14G4099 Fragaria x ananassa HOM05D003809 ORTHO05D003935 1.7e-25 119.0 75 65.3
Aa31LG1G22880 Aethionema arabicum HOM05D003809 ORTHO05D003935 2.2e-25 118.6 74 66.2
C03p00540 Brassica napus HOM05D003809 ORTHO05D003935 2.2e-25 118.6 72 63.9
BolC3t12620H Brassica oleracea HOM05D003809 ORTHO05D003935 2.2e-25 118.6 72 63.9
Lsat_1_v5_gn_5_155280 Lactuca sativa HOM05D003809 ORTHO05D003935 2.2e-25 118.6 74 60.8
Prupe.6G058700 Prunus persica HOM05D003809 ORTHO05D003935 2.2e-25 118.6 75 61.3
TWI74G0880 Tripterygium wilfordii HOM05D003809 ORTHO05D003935 2.2e-25 118.6 75 64.0
Glyma.01G115000 Glycine max HOM05D003809 ORTHO05D003935 2.9e-25 118.2 74 64.9
Glyma.07G148000 Glycine max HOM05D003809 ORTHO05D003935 2.9e-25 118.2 75 66.7
Ca_20297_v3 Cicer arietinum L. HOM05D003809 ORTHO05D003935 3.8e-25 117.9 74 63.5
Thecc.05G018100 Theobroma cacao HOM05D003809 ORTHO05D003935 3.8e-25 117.9 74 64.9
COL.COLO4_14553 Corchorus olitorius HOM05D003809 ORTHO05D003935 4.9e-25 117.5 74 62.2
Glyma.03G062800 Glycine max HOM05D003809 ORTHO05D003935 4.9e-25 117.5 75 61.3
Glyma.U024600 Glycine max HOM05D003809 ORTHO05D003935 4.9e-25 117.5 75 62.7
Medtr4g015550 Medicago truncatula HOM05D003809 ORTHO05D003935 4.9e-25 117.5 74 63.5
Potri.016G114500 Populus trichocarpa HOM05D003809 ORTHO05D003935 4.9e-25 117.5 75 65.3
RcHm_v2.0_Chr3g0463311 Rosa chinensis HOM05D003809 ORTHO05D003935 4.9e-25 117.5 75 65.3
THA.LOC104816652 Tarenaya hassleriana HOM05D003809 ORTHO05D003935 4.9e-25 117.5 74 66.2
Lj3g0017704 Lotus japonicus HOM05D003809 ORTHO05D003935 6.4e-25 117.1 74 60.8
vmacro08854 Vaccinium macrocarpon HOM05D003809 ORTHO05D003935 6.4e-25 117.1 72 66.7
VMungo0331G1847 Vigna mungo HOM05D003809 ORTHO05D003935 6.4e-25 117.1 75 62.7
MBI05_g34490_MAGBIO Magnolia biondii HOM05D003809 ORTHO05D003935 8.4e-25 116.7 73 64.4
PGR004G1101 Punica granatum HOM05D003809 ORTHO05D003935 8.4e-25 116.7 77 63.6
AL6G10910 Arabidopsis lyrata HOM05D003809 ORTHO05D003935 1.1e-24 116.3 72 63.9
CARHR211600 Cardamine hirsuta HOM05D003809 ORTHO05D003935 1.1e-24 116.3 75 62.7
Duzib106G1511 Durio zibethinus HOM05D003809 ORTHO05D003935 1.1e-24 116.3 74 63.5
Eucgr.K02988 Eucalyptus grandis HOM05D003809 ORTHO05D003935 1.4e-24 115.9 74 60.8
Lalb_Chr19g0124721 Lupinus albus HOM05D003809 ORTHO05D003935 1.4e-24 115.9 74 59.5
CSS0024242 Camellia sinensis var. sinensis HOM05D003809 ORTHO05D003935 3.2e-24 114.8 74 62.2
AT5G01260 Arabidopsis thaliana HOM05D003809 ORTHO05D003935 5.4e-24 114.0 72 62.5
Gohir.D11G348800 Gossypium hirsutum HOM05D003809 ORTHO05D003935 5.4e-24 114.0 76 61.8
Gorai.007G379100 Gossypium raimondii HOM05D003809 ORTHO05D003935 5.4e-24 114.0 76 61.8
Actinidia20726 Actinidia chinensis HOM05D003809 ORTHO05D003935 9.3e-24 113.2 74 60.8
CDE03G0216 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 9.3e-24 113.2 74 64.9
CDE04G0185 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 9.3e-24 113.2 73 64.4
Carub.0006s0062 Capsella rubella HOM05D003809 ORTHO05D003935 1.2e-23 112.8 72 61.1
Sabra06G0076000 Salix brachista HOM05D003809 ORTHO05D003935 1.2e-23 112.8 75 62.7
Glyma.18G199300 Glycine max HOM05D003809 ORTHO05D003935 1.6e-23 112.5 75 64.0
Oeu055170.1 Olea europaea HOM05D003809 ORTHO05D003935 1.6e-23 112.5 74 62.2
Sabra09G0032300 Salix brachista HOM05D000001 ORTHO05D000003 1.6e-23 112.5 74 59.5
COL.COLO4_19141 Corchorus olitorius HOM05D000001 ORTHO05D000003 2.7e-23 111.7 73 56.2
HanXRQChr01g0007011 Helianthus annuus HOM05D003809 ORTHO05D003935 2.7e-23 111.7 74 58.1
Nitab4.5_0000335g0110 Nicotiana tabacum HOM05D003809 ORTHO05D003935 2.7e-23 111.7 74 62.2
Peaxi162Scf00141g00342 Petunia axillaris HOM05D003809 ORTHO05D003935 2.7e-23 111.7 74 62.2
CAN.G772.1 Capsicum annuum HOM05D003809 ORTHO05D003935 3.5e-23 111.3 74 63.5
Nitab4.5_0008420g0020 Nicotiana tabacum HOM05D003809 ORTHO05D003935 3.5e-23 111.3 74 62.2
Potri.009G044800 Populus trichocarpa HOM05D003809 ORTHO05D003935 3.5e-23 111.3 74 58.1
AUR62001660 Chenopodium quinoa HOM05D000001 ORTHO05D000003 4.6e-23 110.9 75 56.0
Sopen09g007230 Solanum pennellii HOM05D003809 ORTHO05D003935 4.6e-23 110.9 74 62.2
Gohir.A11G329600 Gossypium hirsutum HOM05D003809 ORTHO05D003935 6.0e-23 110.5 76 60.5
Psat7g246040 Pisum sativum HOM05D003809 ORTHO05D003935 1.0e-22 109.8 74 56.8
Potri.006G099200 Populus trichocarpa HOM05D003809 ORTHO05D003935 1.0e-22 109.8 75 62.7
Manes.02G120500 Manihot esculenta HOM05D003809 ORTHO05D003935 1.3e-22 109.4 75 50.7
Solyc09g014400.3 Solanum lycopersicum HOM05D003809 ORTHO05D003935 1.3e-22 109.4 74 60.8
Lj2A76T85 Lonicera japonica HOM05D003809 ORTHO05D003935 1.8e-22 109.0 81 54.3
Sc06g0006210 Simmondsia chinensis HOM05D003809 ORTHO05D003935 1.8e-22 109.0 74 55.4
Lalb_Chr07g0193501 Lupinus albus HOM05D003809 ORTHO05D003935 3.9e-22 107.8 74 56.8
Cc01_g20760 Coffea canephora HOM05D003809 ORTHO05D003935 5.1e-22 107.5 74 60.8
Cc06_g01490 Coffea canephora HOM05D003809 ORTHO05D003935 5.1e-22 107.5 74 60.8
DCAR_018710 Daucus carota HOM05D003809 ORTHO05D003935 8.7e-22 106.7 76 55.3
Manes.01G162300 Manihot esculenta HOM05D003809 ORTHO05D003935 8.7e-22 106.7 75 48.0
Gohir.A09G164500 Gossypium hirsutum HOM05D003809 ORTHO05D003935 1.1e-21 106.3 76 59.2
CSS0006268 Camellia sinensis var. sinensis HOM05D003809 ORTHO05D003935 1.5e-21 105.9 75 57.3
Gorai.006G181700 Gossypium raimondii HOM05D003809 ORTHO05D003935 1.5e-21 105.9 76 59.2
CsaV3_3G033890 Cucumis sativus L. HOM05D003809 ORTHO05D003935 1.9e-21 105.5 70 60.0
ClCG10G022040 Citrullus lanatus HOM05D003809 ORTHO05D003935 2.5e-21 105.1 70 58.6
FAN05G1413 Fragaria x ananassa HOM05D003809 ORTHO05D003935 2.5e-21 105.1 75 61.3
Phvul.008G105500 Phaseolus vulgaris HOM05D003809 ORTHO05D003935 2.5e-21 105.1 75 54.7
Phvul.010G002900 Phaseolus vulgaris HOM05D003809 ORTHO05D003935 4.3e-21 104.4 75 56.0
VMungo1383G0216 Vigna mungo HOM05D003809 ORTHO05D003935 4.3e-21 104.4 75 54.7
MSTRG.10226 Avicennia marina HOM05D003809 ORTHO05D003935 7.4e-21 103.6 74 54.1
SGA_v2.0_scaffold240G44100 Striga asiatica HOM05D003809 ORTHO05D003935 7.4e-21 103.6 72 55.6
MELO3C009176.2 Cucumis melo HOM05D003809 ORTHO05D003935 9.6e-21 103.2 70 58.6
DCAR_015432 Daucus carota HOM05D003809 ORTHO05D003935 9.6e-21 103.2 74 58.1
Gohir.D09G160100 Gossypium hirsutum HOM05D003809 ORTHO05D003935 9.6e-21 103.2 76 57.9
SalBow4G1747 Salvia bowleyana HOM05D003809 ORTHO05D003935 1.6e-20 102.4 74 51.4
Sed0014073 Sechium edule HOM05D003809 ORTHO05D003935 1.6e-20 102.4 70 57.1
HPP92_019882 Vanilla planifolia HOM05D003809 ORTHO05D003935 1.6e-20 102.4 79 50.6
ATR0618G237 Amborella trichopoda HOM05D003809 ORTHO05D003935 2.1e-20 102.1 78 53.8
Hund04870 Selenicereus undatus HOM05D003809 ORTHO05D003935 2.1e-20 102.1 74 52.7
arahy.Tifrunner.gnm1.ann1.31N575 Arachis hypogaea HOM05D003809 ORTHO05D003935 2.8e-20 101.7 74 56.8
arahy.Tifrunner.gnm1.ann1.3JQR8Y Arachis hypogaea HOM05D003809 ORTHO05D003935 2.8e-20 101.7 74 56.8
Sed0009856 Sechium edule HOM05D003809 ORTHO05D003935 2.8e-20 101.7 75 52.0
arahy.Tifrunner.gnm1.ann1.TSB66L Arachis hypogaea HOM05D003809 ORTHO05D003935 8.1e-20 100.1 74 54.1
PGR004G0704 Punica granatum HOM05D003809 ORTHO05D003935 1.4e-19 99.4 77 55.8
ECA248G2658 Erigeron canadensis HOM05D003809 ORTHO05D003935 4.0e-19 97.8 76 55.3
SEGI_38034 Sequoiadendron giganteum HOM05D003809 ORTHO05D003935 4.0e-19 97.8 76 51.3
ECA246G4062 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.2e-18 96.3 75 52.0
Migut.L02004 Erythranthe guttata HOM05D003809 ORTHO05D003935 1.7e-17 92.4 65 56.9
Os05g0446900 Oryza sativa ssp. japonica HOM05D003809 ORTHO05D003935 2.9e-17 91.7 74 47.3
PSO566G0289 Papaver somniferum HOM05D003809 ORTHO05D003935 3.8e-17 91.3 73 53.4
PSO566G0296 Papaver somniferum HOM05D003809 ORTHO05D003935 3.8e-17 91.3 68 52.9
PSO566G0209 Papaver somniferum HOM05D003809 ORTHO05D003935 4.9e-17 90.9 68 51.5
Zm00001eb289050 Zea mays HOM05D003809 ORTHO05D003935 3.5e-15 84.7 75 46.7
Zm00001eb367050 Zea mays HOM05D003809 ORTHO05D003935 4.6e-15 84.3 76 44.7
Dinv03585 Davidia involucrata HOM05D003809 ORTHO05D003935 1.3e-14 82.8 54 63.0
unitig_37.g12663 Utricularia gibba HOM05D003809 ORTHO05D003935 1.3e-14 82.8 75 45.3
Os01g0856900 Oryza sativa ssp. japonica HOM05D003809 ORTHO05D003935 5.1e-14 80.9 75 40.0
SMO142G0031 Selaginella moellendorffii HOM05D003809 ORTHO05D003935 8.7e-14 80.1 67 49.3
SMO358G0668 Selaginella moellendorffii HOM05D003809 ORTHO05D003935 8.7e-14 80.1 67 49.3
Ah.08g221090 Amaranthus hybridus HOM05D003809 ORTHO05D003935 1.5e-13 79.3 55 54.5
Pp3c6_22980 Physcomitrium patens HOM05D003809 ORTHO05D003935 7.4e-13 77.0 75 42.7
SEGI_39495 Sequoiadendron giganteum HOM05D003809 ORTHO05D003935 9.6e-13 76.6 67 43.3
PSO566G0059 Papaver somniferum HOM05D003809 ORTHO05D003935 2.1e-12 75.5 55 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3507 Anthoceros agrestis HOM05D003809 ORTHO05D003935 1.4e-11 72.8 67 44.8
SMO118G0122 Selaginella moellendorffii HOM05D003809 ORTHO05D003935 6.9e-11 70.5 71 36.6
Glyma.03G061751 Glycine max HOM05D003809 ORTHO05D003935 1.5e-10 69.3 45 55.6
Pp3c23_18810 Physcomitrium patens HOM05D028458 ORTHO05D003935 1.5e-10 69.3 68 42.6
HPP92_019874 Vanilla planifolia HOM05D058214 ORTHO05D003935 2.0e-10 68.9 59 45.8
Mapoly0033s0050 Marchantia polymorpha HOM05D003809 ORTHO05D003935 2.6e-10 68.6 70 40.0
Pp3c16_3300 Physcomitrium patens HOM05D003809 ORTHO05D003935 2.6e-10 68.6 68 39.7
Cre17.g719900 Chlamydomonas reinhardtii HOM05D001235 ORTHO05D005684 4.2e-08 61.2 73 30.1


User provided reference genes

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