Gene: AT5G01260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G01260
  • Transcript Identifier AT5G01260.3
  • Gene Type Coding gene
  • Location Chr5 : 105367-106804 : positive

Gene Family Information

  • ID HOM05D003809
  • #Genes/#Species 181/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G01260.3
  • uniprot Q93ZD1

Descriptions

  • Description Carbohydrate-binding-like fold
  • Computational description Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044); BEST Arabidopsis thaliana protein match is: catalytics;carbohydrate kinases;phosphoglucan, water dikinases (TAIR:AT5G26570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2001070
IEA
Gene Ontologystarch binding
GO:2001070
IEA
InterProstarch binding
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013783 Immunoglobulin-like fold
IPR002044 Carbohydrate binding module family 20
IPR013784 Carbohydrate-binding-like fold
Mapman id Description
35.1 not assigned.annotated