Gene: FAN25G1218

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN25G1218
  • Transcript Identifier FAN25G1218.1
  • Gene Type Coding gene
  • Location Fvb3-1 : 4737643-4742193 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id augustus_masked-Fvb3-1-processed-gene-47.5.v1.0.a1
  • pacid 50552863

Descriptions

  • Description PF00686//PF01535//PF13041//PF14432 - Starch binding domain (CBM_20) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT2G29760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2001070
IEA
InterProstarch binding
GO:0005515
IEA
InterProprotein binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G29760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G29760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002044 Carbohydrate binding module family 20
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR013784 Carbohydrate-binding-like fold
IPR032867 DYW domain
IPR013783 Immunoglobulin-like fold
Mapman id Description
35.1 not assigned.annotated