Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 2.3e-229 798.5 394 100.0
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 1.2e-214 749.6 396 94.9
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 7.5e-212 740.3 394 93.4
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 6.5e-208 727.2 363 98.9
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 3.6e-206 721.5 394 90.4
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.2e-196 689.9 394 88.3
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 5.4e-194 681.0 394 87.3
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 2.0e-193 679.1 398 85.9
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 3.3e-191 671.8 403 85.9
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 3.3e-191 671.8 403 85.9
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 3.3e-191 671.8 403 85.9
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 2.8e-190 668.7 374 89.3
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 4.7e-190 667.9 374 89.0
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.8e-189 666.0 374 89.0
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 1.2e-188 663.3 350 93.4
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 8.3e-187 657.1 370 88.4
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 2.0e-185 652.5 354 91.5
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 1.1e-183 646.7 371 88.4
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 2.1e-182 642.5 371 88.4
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 4.7e-182 641.3 363 88.4
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 2.3e-181 639.0 360 89.2
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 6.8e-181 637.5 374 87.7
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 6.8e-181 637.5 374 87.7
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 3.7e-179 631.7 354 89.0
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 7.0e-178 627.5 365 87.7
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 7.0e-178 627.5 365 87.7
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.1e-175 620.2 335 91.3
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 2.5e-175 619.0 374 85.6
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 1.8e-173 612.8 333 90.7
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 2.0e-172 609.4 394 80.7
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 2.4e-170 602.4 399 80.7
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 6.0e-169 597.8 360 84.4
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 4.3e-167 591.7 338 89.3
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.1e-162 575.1 322 90.4
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-161 573.2 305 93.8
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-161 573.2 305 93.8
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 3.4e-156 555.4 359 80.2
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 2.9e-155 552.4 372 78.5
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 6.4e-155 551.2 461 66.6
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-151 539.7 305 89.8
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.3e-149 531.6 305 89.5
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 3.4e-148 528.9 373 76.1
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.7e-142 508.8 300 88.0
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.7e-142 508.8 300 88.0
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 6.2e-142 508.1 326 82.2
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.8e-136 490.0 300 82.0
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 6.9e-133 478.0 373 70.8
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.5e-127 459.5 292 78.1
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 4.5e-124 448.7 279 84.9
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.6e-124 448.0 254 89.8
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 1.1e-114 417.5 372 63.4
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 7.2e-114 414.8 340 68.2
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 5.9e-108 395.2 394 59.4
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 8.0e-105 384.8 394 58.4
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-101 374.0 342 61.1
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-101 374.0 342 61.1
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-101 374.0 342 61.1
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-101 374.0 342 61.1
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.4e-101 374.0 342 61.1
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.2e-96 355.5 207 87.9
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 5.7e-95 352.1 342 58.5
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 4.1e-93 345.9 311 63.3
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 3.5e-92 342.8 207 85.5
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 4.7e-89 332.4 249 72.3
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 4.5e-76 289.3 154 92.9
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 3.8e-75 286.2 155 91.6
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 5.4e-69 265.8 159 84.9
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 1.2e-68 264.6 152 87.5
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.8e-68 261.9 155 85.8
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.5e-63 245.4 253 56.1
BraSC48t46240Z Brassica rapa HOM05D001987 ORTHO05D006514 3.7e-62 243.0 161 78.9
Sopen05g027070 Solanum pennellii HOM05D001987 ORTHO05D006514 8.3e-62 241.9 143 84.6
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 7.5e-55 218.8 113 95.6
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 1.7e-54 217.6 116 93.1
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.3e-51 207.2 129 81.4
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 8.6e-51 205.3 109 93.6
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 5.6e-50 202.6 145 76.6
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 4.2e-45 186.4 124 75.8
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 2.1e-44 184.1 103 89.3
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.7e-43 178.7 145 69.0
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 1.1e-42 178.3 123 76.4
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 1.9e-42 177.6 150 63.3
Nitab4.5_0009703g0120 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.9e-40 169.1 174 59.2
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 4.4e-39 166.4 509 33.4
CAN.G1202.8 Capsicum annuum HOM05D001987 ORTHO05D006514 5.4e-37 159.5 91 89.0
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 3.0e-35 153.7 84 89.3
Nitab4.5_0000309g0220 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.2e-33 146.0 91 80.2
Nitab4.5_0000309g0190 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.1e-32 143.7 96 79.2
Nitab4.5_0000334g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 2.1e-28 131.0 186 44.1
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.5e-28 130.2 88 75.0
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 1.3e-27 128.3 67 89.6
Pp3c2_23480 Physcomitrium patens HOM05D001987 ORTHO05D006514 3.7e-25 120.2 248 38.3
Nitab4.5_0011784g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.2e-25 119.4 62 93.5
TPR.G21771 Trifolium pratense HOM05D001987 ORTHO05D006514 1.8e-24 117.9 94 66.0
Solyc05g045770.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-22 111.7 73 75.3
SHI01961 Sapria himalayana HOM05D001987 ORTHO05D006514 3.9e-19 100.1 246 35.4
CAN.G1542.10 Capsicum annuum HOM05D001987 ORTHO05D006514 7.4e-18 95.9 100 53.0
Solyc12g035815.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.8e-14 83.6 112 47.3
Lalb_Chr19g0127771 Lupinus albus HOM05D001987 ORTHO05D006514 1.6e-12 78.2 47 85.1
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.6e-12 78.2 63 66.7
Solyc05g045822.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.9e-12 75.9 51 70.6
Solyc12g035820.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.3e-11 75.1 145 35.2
Nitab4.5_0001761g0040 Nicotiana tabacum HOM05D001987 ORTHO05D015637 6.7e-11 72.8 35 94.3
Lsat_1_v5_gn_4_178801 Lactuca sativa HOM05D001987 ORTHO05D006514 1.5e-10 71.6 40 85.0
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 2.2e-09 67.8 42 78.6
Nitab4.5_0000309g0210 Nicotiana tabacum HOM05D001987 ORTHO05D015637 3.1e-08 63.9 36 83.3
SHI11170 Sapria himalayana HOM05D001987 ORTHO05D006514 9.0e-08 62.4 49 69.4
EL10Ac5g12759 Beta vulgaris HOM05D001987 ORTHO05D006514 6.5e-06 56.2 74 44.6


User provided reference genes

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