Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08488 Nelumbo nucifera HOM05D006781 ORTHO05D008500 4.6e-105 384.8 227 100.0
TAR628G1576 Trochodendron aralioides HOM05D006781 ORTHO05D008500 6.4e-83 311.2 211 78.2
TAR628G1642 Trochodendron aralioides HOM05D006781 ORTHO05D008500 6.4e-83 311.2 211 78.2
Cc07_g09330 Coffea canephora HOM05D006781 ORTHO05D008500 1.2e-76 290.4 214 77.1
Migut.H01003 Erythranthe guttata HOM05D006781 ORTHO05D008500 1.5e-76 290.0 211 73.9
CANSAT01G0093 Cannabis sativa HOM05D006781 ORTHO05D008500 2.6e-76 289.3 211 75.8
Aqoxy6G01071 Aquilegia oxysepala HOM05D006781 ORTHO05D008500 5.8e-76 288.1 218 76.6
Dinv26821 Davidia involucrata HOM05D006781 ORTHO05D008500 2.9e-75 285.8 211 77.7
MSTRG.23537 Avicennia marina HOM05D006781 ORTHO05D008500 3.8e-75 285.4 211 73.0
SGA_v2.0_scaffold276G46640 Striga asiatica HOM05D006781 ORTHO05D008500 2.5e-74 282.7 211 72.0
TWI73G0565 Tripterygium wilfordii HOM05D006781 ORTHO05D008500 2.5e-74 282.7 211 74.9
Haze_15109 Corylus avellana HOM05D006781 ORTHO05D008500 5.5e-74 281.6 211 74.4
Lsat_1_v5_gn_4_150821 Lactuca sativa HOM05D006781 ORTHO05D008500 7.1e-74 281.2 212 71.7
Oeu024876.1 Olea europaea HOM05D006781 ORTHO05D008500 7.1e-74 281.2 211 72.0
Cfa004291 Carpinus fangiana HOM05D006781 ORTHO05D008500 1.2e-73 280.4 211 73.0
PSO541G3113 Papaver somniferum HOM05D006781 ORTHO05D008500 2.7e-73 279.3 226 73.9
SalBow1G4613 Salvia bowleyana HOM05D006781 ORTHO05D008500 2.7e-73 279.3 211 72.5
HanXRQChr02g0054021 Helianthus annuus HOM05D006781 ORTHO05D008500 4.6e-73 278.5 211 71.6
RcHm_v2.0_Chr2g0101921 Rosa chinensis HOM05D006781 ORTHO05D008500 6.0e-73 278.1 211 70.6
AT4G36650 Arabidopsis thaliana HOM05D006781 ORTHO05D008500 7.9e-73 277.7 211 70.1
ClCG01G019450 Citrullus lanatus HOM05D006781 ORTHO05D008500 1.3e-72 276.9 211 69.2
Sp7g34310 Schrenkiella parvula HOM05D006781 ORTHO05D008500 1.3e-72 276.9 211 70.1
Lj4A199T79 Lonicera japonica HOM05D006781 ORTHO05D008500 1.8e-72 276.6 212 70.3
CARHR244990 Cardamine hirsuta HOM05D006781 ORTHO05D008500 2.3e-72 276.2 211 70.1
AL7G14360 Arabidopsis lyrata HOM05D006781 ORTHO05D008500 3.0e-72 275.8 211 69.7
MELO3C007819.2 Cucumis melo HOM05D006781 ORTHO05D008500 3.9e-72 275.4 211 68.7
CsaV3_6G046160 Cucumis sativus L. HOM05D006781 ORTHO05D008500 3.9e-72 275.4 211 68.7
Thhalv10024972m.g Eutrema salsugineum HOM05D006781 ORTHO05D008500 5.1e-72 275.0 211 69.7
Atru.chr3.553 Acer truncatum HOM05D006781 ORTHO05D008500 6.7e-72 274.6 213 74.6
Manes.02G092200 Manihot esculenta HOM05D006781 ORTHO05D008500 8.7e-72 274.2 211 69.7
FvH4_1g13530 Fragaria vesca HOM05D006781 ORTHO05D008500 1.1e-71 273.9 211 75.4
Thecc.01G038000 Theobroma cacao HOM05D006781 ORTHO05D008500 1.1e-71 273.9 211 69.2
Psat2g160720 Pisum sativum HOM05D006781 ORTHO05D008500 1.5e-71 273.5 211 73.0
CSS0005063 Camellia sinensis var. sinensis HOM05D006781 ORTHO05D008500 3.3e-71 272.3 213 70.4
CSS0044143 Camellia sinensis var. sinensis HOM05D006781 ORTHO05D008500 3.3e-71 272.3 213 70.4
COL.COLO4_22101 Corchorus olitorius HOM05D006781 ORTHO05D008500 3.3e-71 272.3 211 69.7
Cpa.g.sc544.3 Carica papaya HOM05D006781 ORTHO05D008500 4.3e-71 271.9 211 72.5
arahy.Tifrunner.gnm1.ann1.IS0T5T Arachis hypogaea HOM05D006781 ORTHO05D008500 5.7e-71 271.6 214 72.9
Carub.0007s0367 Capsella rubella HOM05D006781 ORTHO05D008500 5.7e-71 271.6 211 68.7
Medtr5g019910 Medicago truncatula HOM05D006781 ORTHO05D008500 5.7e-71 271.6 211 69.2
Sed0022670 Sechium edule HOM05D006781 ORTHO05D008500 5.7e-71 271.6 211 68.7
BcaNung04429 Brassica carinata HOM05D006781 ORTHO05D008500 7.4e-71 271.2 211 68.2
PGSC0003DMG400014907 Solanum tuberosum HOM05D006781 ORTHO05D008500 7.4e-71 271.2 211 71.6
arahy.Tifrunner.gnm1.ann1.WUH8B9 Arachis hypogaea HOM05D006781 ORTHO05D008500 9.6e-71 270.8 212 73.1
FAN23G0683 Fragaria x ananassa HOM05D006781 ORTHO05D008500 9.6e-71 270.8 211 73.5
Gohir.D11G191800 Gossypium hirsutum HOM05D006781 ORTHO05D008500 9.6e-71 270.8 211 69.2
Gorai.007G204500 Gossypium raimondii HOM05D006781 ORTHO05D008500 9.6e-71 270.8 211 69.2
Lalb_Chr09g0322521 Lupinus albus HOM05D006781 ORTHO05D008500 9.6e-71 270.8 211 72.0
Nitab4.5_0000434g0010 Nicotiana tabacum HOM05D006781 ORTHO05D008500 9.6e-71 270.8 211 72.5
Nitab4.5_0001827g0050 Nicotiana tabacum HOM05D006781 ORTHO05D008500 9.6e-71 270.8 211 72.5
CiPaw.02G016000 Carya illinoinensis HOM05D006781 ORTHO05D008500 1.3e-70 270.4 211 71.1
Gohir.A11G185300 Gossypium hirsutum HOM05D006781 ORTHO05D008500 1.3e-70 270.4 211 69.2
FAN19G3094 Fragaria x ananassa HOM05D006781 ORTHO05D008500 2.1e-70 269.6 211 74.9
ECA232G4265 Erigeron canadensis HOM05D000595 ORTHO05D001274 3.7e-70 268.9 211 69.7
Prupe.7G152500 Prunus persica HOM05D006781 ORTHO05D008500 3.7e-70 268.9 212 73.1
QL06p045633 Quercus lobata HOM05D006781 ORTHO05D008500 3.7e-70 268.9 211 68.7
Duzib187G0625 Durio zibethinus HOM05D006781 ORTHO05D008500 4.8e-70 268.5 211 68.7
unitig_52.g17586 Utricularia gibba HOM05D006781 ORTHO05D008500 4.8e-70 268.5 212 70.3
VMungo1215G2776 Vigna mungo HOM05D006781 ORTHO05D008500 4.8e-70 268.5 211 71.6
Aa31LG6G13450 Aethionema arabicum HOM05D006781 ORTHO05D008500 8.2e-70 267.7 211 68.2
A03p64390 Brassica napus HOM05D006781 ORTHO05D008500 8.2e-70 267.7 214 69.2
BraA03t15504Z Brassica rapa HOM05D006781 ORTHO05D008500 8.2e-70 267.7 214 69.2
Phvul.002G028900 Phaseolus vulgaris HOM05D006781 ORTHO05D008500 1.1e-69 267.3 211 71.1
Glyma.01G174900 Glycine max HOM05D006781 ORTHO05D008500 1.4e-69 266.9 211 72.5
CAN.G358.110 Capsicum annuum HOM05D006781 ORTHO05D008500 1.8e-69 266.5 211 71.6
FAN28G1912 Fragaria x ananassa HOM05D006781 ORTHO05D008500 1.8e-69 266.5 211 72.0
Glyma.11G066900 Glycine max HOM05D006781 ORTHO05D008500 1.8e-69 266.5 211 71.1
Lj2g0016513 Lotus japonicus HOM05D006781 ORTHO05D008500 1.8e-69 266.5 211 67.3
Solyc02g085470.3 Solanum lycopersicum HOM05D006781 ORTHO05D008500 2.4e-69 266.2 211 69.7
Sopen02g030150 Solanum pennellii HOM05D006781 ORTHO05D008500 2.4e-69 266.2 211 69.7
MBI16_g37743_MAGBIO Magnolia biondii HOM05D006781 ORTHO05D008500 4.1e-69 265.4 216 73.1
GSVIVG01018985001 Vitis vinifera HOM05D006781 ORTHO05D008500 4.1e-69 265.4 211 74.9
BolC7t46605H Brassica oleracea HOM05D006781 ORTHO05D008500 2.0e-68 263.1 211 67.3
Ciclev10025402m.g Citrus clementina HOM05D006781 ORTHO05D008500 2.6e-68 262.7 211 66.8
Potri.007G027600 Populus trichocarpa HOM05D006781 ORTHO05D008500 2.6e-68 262.7 212 67.5
C07p61830 Brassica napus HOM05D006781 ORTHO05D008500 3.4e-68 262.3 211 66.8
Eucgr.H01265 Eucalyptus grandis HOM05D006781 ORTHO05D008500 4.5e-68 261.9 218 71.6
THA.LOC104807446 Tarenaya hassleriana HOM05D006781 ORTHO05D008500 1.0e-67 260.8 215 70.7
HPP92_024892 Vanilla planifolia HOM05D006781 ORTHO05D008500 1.7e-67 260.0 211 66.8
MD15G1265100 Malus domestica HOM05D006781 ORTHO05D008500 3.8e-67 258.8 212 70.8
PGR102G0302 Punica granatum HOM05D006781 ORTHO05D008500 8.4e-67 257.7 213 65.3
AUR62003169 Chenopodium quinoa HOM05D006781 ORTHO05D008500 5.5e-66 255.0 214 66.4
AUR62007987 Chenopodium quinoa HOM05D006781 ORTHO05D008500 5.5e-66 255.0 214 66.4
DCAR_017258 Daucus carota HOM05D006781 ORTHO05D008500 1.2e-65 253.8 217 65.4
Hund14146 Selenicereus undatus HOM05D006781 ORTHO05D008500 1.0e-64 250.8 213 68.1
Sc18g0003010 Simmondsia chinensis HOM05D006781 ORTHO05D008500 2.3e-64 249.6 211 64.9
SHI22874 Sapria himalayana HOM05D006781 ORTHO05D008500 5.7e-63 245.0 209 64.1
EL10Ac6g14931 Beta vulgaris HOM05D006781 ORTHO05D008500 8.2e-62 241.1 214 65.0
Peaxi162Scf00515g00425 Petunia axillaris HOM05D006781 ORTHO05D008500 3.1e-61 239.2 197 67.0
Ah.03g139450 Amaranthus hybridus HOM05D006781 ORTHO05D008500 1.2e-60 237.3 218 65.6
CDE04G3347 Ceratophyllum demersum HOM05D006781 ORTHO05D008500 2.6e-60 236.1 197 66.5
CDE02G0088 Ceratophyllum demersum HOM05D006781 ORTHO05D008500 4.5e-60 235.3 197 67.0
TPR.G28685 Trifolium pratense HOM05D006781 ORTHO05D008500 5.5e-58 228.4 190 73.7
SEGI_35841 Sequoiadendron giganteum HOM05D006781 ORTHO05D008500 8.2e-54 214.5 218 57.3
SMO351G0206 Selaginella moellendorffii HOM05D006781 ORTHO05D008500 7.7e-52 208.0 211 53.1
Actinidia19175 Actinidia chinensis HOM05D006781 ORTHO05D008500 7.2e-50 201.4 211 55.5
Rhsim08G0114100 Rhododendron simsii HOM05D006781 ORTHO05D008500 4.7e-49 198.7 128 90.6
Zm00001eb401050 Zea mays HOM05D006781 ORTHO05D008500 6.7e-48 194.9 213 59.2
Sabra07G0024100 Salix brachista HOM05D006781 ORTHO05D008500 1.5e-47 193.7 163 65.6
vmacro17849 Vaccinium macrocarpon HOM05D006781 ORTHO05D008500 3.7e-46 189.1 211 55.5
AagrBONN_evm.TU.Sc2ySwM_228.123 Anthoceros agrestis HOM05D006781 ORTHO05D008500 1.1e-45 187.6 217 49.8
ATR0733G081 Amborella trichopoda HOM05D006781 ORTHO05D008500 2.4e-45 186.4 217 52.1
C01p02440 Brassica napus HOM05D006781 ORTHO05D008500 3.5e-44 182.6 130 73.8
Zm00001eb093700 Zea mays HOM05D006781 ORTHO05D008500 6.5e-43 178.3 204 57.8
Zm00001eb025920 Zea mays HOM05D006781 ORTHO05D008500 4.7e-41 172.2 204 56.4
Mapoly0029s0042 Marchantia polymorpha HOM05D006781 ORTHO05D008500 3.3e-39 166.0 210 45.2
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 9.4e-34 147.9 113 70.8
Zm00001eb221630 Zea mays HOM05D006781 ORTHO05D008500 1.0e-32 144.4 118 67.8
Dinv39967 Davidia involucrata HOM05D006781 ORTHO05D008500 3.0e-24 116.3 63 93.7
BcaC08g43565 Brassica carinata HOM05D000551 ORTHO05D001750 1.7e-19 100.5 89 59.6
Zm00001eb203540 Zea mays HOM05D006781 ORTHO05D008500 2.8e-17 93.2 57 82.5


User provided reference genes

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