Gene: PGSC0003DMG400014907

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400014907
  • Transcript Identifier PGSC0003DMT400038588
  • Gene Type Coding gene
  • Location ST4.03ch02 : 40673887-40676989 : negative

Gene Family Information

  • ID HOM05D006781
  • #Genes/#Species 119/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37428551
  • id PGSC0003DMG400014907.v4.03
  • uniprot M1B752

Descriptions

  • Description Transcription factor IIB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IBA
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0070897
IEA
GOA Databasetranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
IBA
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding
GO:0000182
IEA
GOA DatabaserDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0097550
IBA
GOA Databasetranscription preinitiation complex
GO:0009527
IEA
GOA Databaseplastid outer membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000812 Transcription factor TFIIB
IPR036915 Cyclin-like superfamily
IPR013763 Cyclin-like
IPR013150 Transcription factor TFIIB, cyclin-like domain
Mapman id Description
15.2.2 RNA biosynthesis.RNA polymerase I-dependent transcription.transcription initiation factor (BRP1)