Gene: COL.COLO4_22101

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_22101
  • Transcript Identifier COL.rna20850
  • Gene Type Coding gene
  • Location AWUE01017851.1 : 18918-21866 : negative

Gene Family Information

  • ID HOM05D006781
  • #Genes/#Species 119/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna20850
  • GenBank OMO84348.1
  • id gene22073
  • gene_name COLO4_22101
  • uniprot A0A1R3IP32

Descriptions

  • Description Transcription factor TFIIB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070897
IEA
GOA Databasetranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding
GO:0000182
ISO
PLAZA Integrative OrthologyrDNA binding AT4G36650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009527
ISO
PLAZA Integrative Orthologyplastid outer membrane AT4G36650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000812 Transcription factor TFIIB
IPR013763 Cyclin-like
IPR013150 Transcription factor TFIIB, cyclin-like domain
IPR036915 Cyclin-like superfamily
Mapman id Description
15.2.2 RNA biosynthesis.RNA polymerase I-dependent transcription.transcription initiation factor (BRP1)