Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 4.9e-269 930.6 494 100.0
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 9.9e-230 800.0 494 85.4
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 2.7e-203 712.2 503 78.3
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 5.2e-186 654.8 505 70.9
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 5.2e-186 654.8 508 71.1
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 8.5e-181 637.5 491 69.0
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 4.8e-176 621.7 503 68.2
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.8e-170 603.2 502 64.7
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 1.8e-170 603.2 508 66.3
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 5.2e-170 601.7 509 64.6
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 7.0e-167 591.3 515 64.7
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 2.9e-165 585.9 502 64.5
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 2.5e-164 582.8 485 66.0
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 3.3e-164 582.4 499 66.7
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 1.2e-163 580.5 489 65.8
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 1.6e-163 580.1 492 64.8
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 4.7e-163 578.6 511 64.8
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 6.8e-162 574.7 484 66.5
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.2e-160 569.7 483 65.0
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 2.4e-159 566.2 507 65.3
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.4e-159 566.2 493 61.5
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 4.1e-159 565.5 499 64.5
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 4.1e-159 565.5 484 64.7
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 4.1e-159 565.5 482 65.4
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 7.0e-159 564.7 487 64.9
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 1.2e-158 563.9 484 66.5
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 4.6e-158 562.0 499 63.9
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 8.6e-157 557.8 510 62.4
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 1.1e-156 557.4 399 73.4
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 1.9e-156 556.6 503 63.4
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 4.3e-156 555.4 478 65.1
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 4.3e-156 555.4 503 61.4
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 4.3e-156 555.4 508 60.2
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.6e-155 553.5 420 69.5
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.6e-155 553.5 475 65.7
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 2.8e-155 552.7 498 62.2
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 4.7e-155 552.0 450 66.7
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 4.7e-155 552.0 472 65.5
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 4.7e-155 552.0 475 65.5
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 6.2e-155 551.6 491 63.3
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 1.1e-154 550.8 514 60.5
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 1.4e-154 550.4 489 65.2
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 1.4e-154 550.4 513 61.2
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 3.1e-154 549.3 472 65.5
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 4.0e-154 548.9 507 62.5
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 4.0e-154 548.9 490 64.9
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 6.8e-154 548.1 494 63.8
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 2.6e-153 546.2 487 62.2
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 2.6e-153 546.2 467 64.0
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 3.4e-153 545.8 495 62.0
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 4.4e-153 545.4 504 60.7
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 8.3e-152 541.2 491 62.1
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.4e-151 540.4 459 64.9
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 1.9e-151 540.0 380 74.7
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 2.4e-151 539.7 506 61.1
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 3.2e-151 539.3 475 64.4
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 7.0e-151 538.1 498 61.6
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 7.0e-151 538.1 468 64.7
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 9.2e-151 537.7 455 62.9
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 2.0e-150 536.6 476 62.6
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 4.6e-150 535.4 501 59.9
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 1.0e-149 534.3 485 61.9
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 1.0e-149 534.3 449 65.0
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 1.3e-149 533.9 467 65.3
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 1.7e-149 533.5 475 61.9
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 2.3e-149 533.1 492 64.0
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 2.3e-149 533.1 506 59.7
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 5.0e-149 531.9 379 73.6
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 6.6e-149 531.6 462 62.8
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 8.6e-149 531.2 425 66.8
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 1.1e-148 530.8 481 61.5
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.9e-148 530.0 494 62.6
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 3.3e-148 529.3 472 62.5
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 1.2e-147 527.3 449 64.6
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 2.8e-147 526.2 472 62.3
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 3.6e-147 525.8 503 59.0
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.3e-146 523.1 422 66.8
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 6.8e-146 521.5 491 59.1
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 3.4e-145 519.2 505 58.4
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 4.4e-145 518.8 488 59.6
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 7.5e-145 518.1 414 66.7
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 7.5e-145 518.1 514 58.8
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 9.9e-145 517.7 476 62.0
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 2.9e-144 516.2 507 57.8
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 3.7e-144 515.8 487 61.0
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.9e-144 515.4 509 61.7
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 5.4e-143 511.9 387 69.8
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 5.4e-143 511.9 486 59.9
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 2.1e-142 510.0 487 60.2
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 2.1e-142 510.0 484 59.9
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 3.5e-142 509.2 477 60.8
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 7.8e-142 508.1 398 67.8
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 7.8e-142 508.1 479 60.8
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 7.8e-142 508.1 405 64.7
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 1.7e-141 506.9 493 58.8
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 8.6e-141 504.6 493 59.0
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 1.1e-140 504.2 491 57.8
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.5e-140 503.8 488 59.8
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 1.9e-140 503.4 473 60.7
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 2.1e-139 500.0 494 57.7
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 8.1e-139 498.0 459 58.8
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 4.9e-136 488.8 491 57.2
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 2.4e-135 486.5 481 59.0
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 5.4e-135 485.3 484 58.7
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 5.4e-135 485.3 396 64.1
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 7.1e-135 485.0 489 56.4
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 4.6e-134 482.3 481 57.8
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 4.6e-134 482.3 411 64.0
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 3.9e-133 479.2 385 64.4
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.1e-132 477.6 459 58.4
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 2.5e-132 476.5 477 59.3
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 2.5e-132 476.5 460 59.8
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 4.3e-132 475.7 478 58.4
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 7.3e-132 474.9 453 57.8
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 7.3e-132 474.9 456 59.9
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 1.2e-131 474.2 473 57.1
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 1.6e-131 473.8 475 57.1
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 1.6e-131 473.8 453 58.9
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 3.6e-131 472.6 490 58.6
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 8.1e-131 471.5 456 58.3
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 3.1e-130 469.5 456 58.1
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 5.2e-130 468.8 473 57.1
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 9.9e-129 464.5 316 75.6
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 1.7e-128 463.8 449 59.0
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 1.7e-128 463.8 478 56.9
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 8.4e-128 461.5 456 58.6
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 4.2e-127 459.1 513 55.8
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 4.2e-127 459.1 456 58.3
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 1.6e-126 457.2 480 54.2
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 1.0e-125 454.5 475 56.2
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 1.0e-125 454.5 458 54.8
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 1.3e-125 454.1 449 57.5
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 1.7e-125 453.8 451 57.9
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 3.0e-125 453.0 481 52.4
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 5.1e-125 452.2 490 54.5
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.1e-124 451.1 484 55.0
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.9e-124 450.3 460 54.8
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 9.6e-124 448.0 473 54.5
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 1.3e-123 447.6 511 52.3
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.4e-122 443.4 456 55.5
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 3.1e-122 443.0 453 54.7
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 2.6e-121 439.9 330 67.9
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 3.8e-120 436.0 471 55.2
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 2.1e-115 420.2 387 58.1
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 5.5e-111 405.6 429 52.7
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 5.1e-109 399.1 278 69.4
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.9e-108 397.1 347 61.1
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 1.6e-102 377.5 378 52.9
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 5.1e-101 372.5 470 52.3
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 1.2e-94 351.3 455 44.4
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 5.9e-89 332.4 270 67.0
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 2.7e-70 270.4 192 75.0
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 8.8e-69 265.4 366 44.8
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 2.5e-63 247.3 608 34.7
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 1.9e-55 221.1 195 65.1
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 5.6e-47 193.0 192 52.6
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.9e-42 177.9 137 71.5
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.0e-41 174.5 147 61.9
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 6.0e-41 172.9 332 40.1
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 1.0e-40 172.2 145 69.7
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 2.5e-39 167.5 117 65.0
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 9.5e-39 165.6 129 70.5
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.8e-37 161.4 129 69.8
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 5.8e-36 156.4 341 36.4
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 3.5e-33 147.1 99 71.7
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 2.6e-28 131.0 315 34.9
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 5.4e-26 123.2 99 61.6
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 5.4e-26 123.2 176 42.0
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 5.4e-26 123.2 176 42.0
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 5.8e-20 103.2 338 28.4
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 5.1e-16 90.1 324 28.1
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 1.9e-15 88.2 70 48.6
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 6.4e-11 73.2 109 48.6
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 1.1e-10 72.4 47 63.8
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 2.3e-08 64.7 53 64.2


User provided reference genes

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