Gene: AT4G24330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G24330
  • Transcript Identifier AT4G24330.1
  • Gene Type Coding gene
  • Location Chr4 : 12603848-12606229 : negative

Gene Family Information

  • ID HOM05D003925
  • #Genes/#Species 177/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G24330.1
  • uniprot Q9STW1

Descriptions

  • Description hypothetical protein (DUF1682)
  • Computational description Protein of unknown function (DUF1682); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1682 (InterPro:IPR012879); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1682) (TAIR:AT5G49945.1); Has 377 Blast hits to 366 proteins in 149 species: Archae - 0; Bacteria - 16; Metazoa - 149; Fungi - 92; Plants - 46; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036503
IEA
Gene OntologyERAD pathway
GO:0036503
IEA
InterProERAD pathway
GO:0032469
IEA
Gene Ontologyendoplasmic reticulum calcium ion homeostasis
GO:0032469
IEA
InterProendoplasmic reticulum calcium ion homeostasis
GO:0008150
ND
GOA Databasebiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IBA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005783
IDA
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
IBA
Gene Ontologyendoplasmic reticulum1 3
GO:0005783
IEA
InterProendoplasmic reticulum
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005829
HDA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012879 PAT complex subunit CCDC47
Mapman id Description
35.1 not assigned.annotated