Gene: AT5G49945
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G49945
- Transcript Identifier AT5G49945.1
- Gene Type Coding gene
- Location Chr5 : 20317418-20319432 : positive
Gene Family Information
- ID HOM05D003925
- #Genes/#Species 177/99
- Phylogenetic origin
- ID ORTHO05D004832
- #Genes/#Species 170/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G49945.1
- uniprot Q94CC0
Descriptions
- Description hypothetical protein (DUF1682)
- Computational description Protein of unknown function (DUF1682); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1682 (InterPro:IPR012879); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1682) (TAIR:AT4G24330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032469 | IEA | Gene Ontology | endoplasmic reticulum calcium ion homeostasis | |
| GO:0032469 | IEA | InterPro | endoplasmic reticulum calcium ion homeostasis | |
| GO:0036503 | IEA | Gene Ontology | ERAD pathway | |
| GO:0036503 | IEA | InterPro | ERAD pathway | |
| GO:0008150 | ND | GOA Database | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IEA | GOA Database | calcium ion binding | |
| GO:0005509 | IBA | Gene Ontology | calcium ion binding | 1 |
| GO:0005509 | IEA | InterPro | calcium ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IDA IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | HDA IBA | Gene Ontology | endoplasmic reticulum | 1 2 |
| GO:0005783 | IEA | InterPro | endoplasmic reticulum | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012879 | PAT complex subunit CCDC47 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |