Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002874g0020 Nicotiana tabacum HOM05D005128 ORTHO05D006227 4.7e-42 174.1 87 100.0
Nitab4.5_0003553g0110 Nicotiana tabacum HOM05D005128 ORTHO05D006227 4.7e-42 174.1 87 100.0
Nitab4.5_0029376g0010 Nicotiana tabacum HOM05D005128 ORTHO05D006227 4.7e-42 174.1 87 100.0
Peaxi162Scf00030g00515 Petunia axillaris HOM05D005128 ORTHO05D006227 4.0e-41 171.0 87 98.9
CAN.G362.11 Capsicum annuum HOM05D005128 ORTHO05D006227 6.8e-41 170.2 87 96.6
Solyc01g090450.3 Solanum lycopersicum HOM05D005128 ORTHO05D006227 1.5e-40 169.1 87 96.6
Sopen01g036240 Solanum pennellii HOM05D005128 ORTHO05D006227 1.5e-40 169.1 87 96.6
PGSC0003DMG400026042 Solanum tuberosum HOM05D005128 ORTHO05D006227 9.8e-40 166.4 87 95.4
Oeu064660.1 Olea europaea HOM05D005128 ORTHO05D006227 2.2e-39 165.2 87 95.4
SalBow7G0891 Salvia bowleyana HOM05D005128 ORTHO05D006227 4.9e-39 164.1 87 95.4
Migut.B01551 Erythranthe guttata HOM05D005128 ORTHO05D006227 1.1e-38 162.9 87 93.1
MSTRG.20701 Avicennia marina HOM05D005128 ORTHO05D006227 1.9e-38 162.2 87 92.0
vmacro13485 Vaccinium macrocarpon HOM05D005128 ORTHO05D006227 2.4e-38 161.8 86 93.0
Actinidia40389 Actinidia chinensis HOM05D005128 ORTHO05D006227 7.0e-38 160.2 86 91.9
TWI14G0708 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 9.2e-38 159.8 85 94.1
TWI14G1050 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 9.2e-38 159.8 85 94.1
GSVIVG01018248001 Vitis vinifera HOM05D005128 ORTHO05D006227 9.2e-38 159.8 85 91.8
Lsat_1_v5_gn_4_46700 Lactuca sativa HOM05D005128 ORTHO05D006227 1.2e-37 159.5 87 89.7
Nn6g33850 Nelumbo nucifera HOM05D005128 ORTHO05D006227 1.2e-37 159.5 85 92.9
Manes.01G272200 Manihot esculenta HOM05D005128 ORTHO05D006227 2.0e-37 158.7 85 90.6
Migut.A00726 Erythranthe guttata HOM05D005128 ORTHO05D006227 2.7e-37 158.3 87 89.7
HanXRQChr05g0138471 Helianthus annuus HOM05D005128 ORTHO05D006227 2.7e-37 158.3 87 89.7
CSS0048126 Camellia sinensis var. sinensis HOM05D005128 ORTHO05D006227 3.5e-37 157.9 87 89.7
ECA234G3101 Erigeron canadensis HOM05D005128 ORTHO05D006227 3.5e-37 157.9 87 88.5
SGA_v2.0_scaffold52G19215 Striga asiatica HOM05D005128 ORTHO05D006227 3.5e-37 157.9 87 93.1
TAR374G1117 Trochodendron aralioides HOM05D005128 ORTHO05D006227 3.5e-37 157.9 84 91.7
SalBow5G0414 Salvia bowleyana HOM05D005128 ORTHO05D006227 4.6e-37 157.5 87 90.8
MELO3C008212.2 Cucumis melo HOM05D005128 ORTHO05D006227 7.8e-37 156.8 85 90.6
Prupe.2G127400 Prunus persica HOM05D005128 ORTHO05D006227 7.8e-37 156.8 85 90.6
Dinv44074 Davidia involucrata HOM05D005128 ORTHO05D006227 1.0e-36 156.4 85 90.6
Cc02_g24910 Coffea canephora HOM05D005128 ORTHO05D006227 1.3e-36 156.0 86 91.9
CsaV3_6G001140 Cucumis sativus L. HOM05D005128 ORTHO05D006227 1.3e-36 156.0 85 89.4
TWI59G1443 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.3e-36 156.0 85 91.8
ClCG11G006910 Citrullus lanatus HOM05D005128 ORTHO05D006227 1.7e-36 155.6 85 89.4
Sed0016496 Sechium edule HOM05D005128 ORTHO05D006227 2.3e-36 155.2 85 89.4
Atru.chr5.161 Acer truncatum HOM05D005128 ORTHO05D006227 3.0e-36 154.8 85 89.4
COL.COLO4_12428 Corchorus olitorius HOM05D005128 ORTHO05D006227 3.0e-36 154.8 85 89.4
Manes.05G053000 Manihot esculenta HOM05D005128 ORTHO05D006227 3.0e-36 154.8 85 89.4
Thecc.01G392500 Theobroma cacao HOM05D005128 ORTHO05D006227 3.0e-36 154.8 85 89.4
unitig_0.g1324 Utricularia gibba HOM05D005128 ORTHO05D006227 3.9e-36 154.5 86 88.4
FvH4_7g09830 Fragaria vesca HOM05D005128 ORTHO05D006227 5.0e-36 154.1 85 88.2
FAN03G0006 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.0e-36 154.1 85 88.2
FAN06G2910 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.0e-36 154.1 85 88.2
FAN10G0506 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.0e-36 154.1 85 88.2
RcHm_v2.0_Chr1g0346991 Rosa chinensis HOM05D005128 ORTHO05D006227 5.0e-36 154.1 85 88.2
Eucgr.E01576 Eucalyptus grandis HOM05D005128 ORTHO05D006227 6.6e-36 153.7 85 88.2
Duzib138G0976 Durio zibethinus HOM05D005128 ORTHO05D006227 8.6e-36 153.3 85 88.2
MBI04_g34109_MAGBIO Magnolia biondii HOM05D005128 ORTHO05D006227 8.6e-36 153.3 84 89.3
FAN10G2714 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.1e-35 152.9 85 87.1
Aqoxy3G02773 Aquilegia oxysepala HOM05D005128 ORTHO05D006227 1.5e-35 152.5 83 90.4
CARHR248040 Cardamine hirsuta HOM05D005128 ORTHO05D006227 1.9e-35 152.1 87 88.5
CiPaw.13G027900 Carya illinoinensis HOM05D005128 ORTHO05D006227 1.9e-35 152.1 84 90.5
AL6G53500 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 3.3e-35 151.4 87 87.4
Ciclev10029559m.g Citrus clementina HOM05D005128 ORTHO05D006227 3.3e-35 151.4 84 88.1
PSO063G1454 Papaver somniferum HOM05D005128 ORTHO05D006227 3.3e-35 151.4 83 88.0
PSO782G3280 Papaver somniferum HOM05D005128 ORTHO05D006227 3.3e-35 151.4 83 88.0
PGR042G1446 Punica granatum HOM05D005128 ORTHO05D006227 3.3e-35 151.4 85 87.1
Carub.0006s3721 Capsella rubella HOM05D005128 ORTHO05D006227 5.6e-35 150.6 87 86.2
Haze_02808 Corylus avellana HOM05D005128 ORTHO05D006227 5.6e-35 150.6 84 88.1
FAN06G2047 Fragaria x ananassa HOM05D005128 ORTHO05D006227 5.6e-35 150.6 85 87.1
QL04p030930 Quercus lobata HOM05D005128 ORTHO05D006227 5.6e-35 150.6 84 89.3
AT4G01710 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 7.3e-35 150.2 87 86.2
Cpa.g.sc101.28 Carica papaya HOM05D005128 ORTHO05D006227 7.3e-35 150.2 84 86.9
Cfa011089 Carpinus fangiana HOM05D005128 ORTHO05D006227 1.2e-34 149.4 84 86.9
MD02G1216700 Malus domestica HOM05D005128 ORTHO05D006227 1.2e-34 149.4 85 88.2
Potri.014G045200 Populus trichocarpa HOM05D005128 ORTHO05D006227 2.1e-34 148.7 87 87.4
Sp2g28380 Schrenkiella parvula HOM05D005128 ORTHO05D006227 2.8e-34 148.3 85 87.1
Aa31LG5G70 Aethionema arabicum HOM05D005128 ORTHO05D006227 3.6e-34 147.9 85 87.1
Eucgr.E00550 Eucalyptus grandis HOM05D005128 ORTHO05D006227 3.6e-34 147.9 85 84.7
Thhalv10005116m.g Eutrema salsugineum HOM05D005128 ORTHO05D006227 3.6e-34 147.9 86 86.0
Potri.002G136500 Populus trichocarpa HOM05D005128 ORTHO05D006227 8.0e-34 146.7 87 86.2
arahy.Tifrunner.gnm1.ann1.L9RWF4 Arachis hypogaea HOM05D005128 ORTHO05D006227 3.1e-33 144.8 84 86.9
Gohir.A12G096500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 4.0e-33 144.4 85 84.7
Gohir.D12G099300 Gossypium hirsutum HOM05D005128 ORTHO05D006227 4.0e-33 144.4 85 84.7
Gorai.008G108000 Gossypium raimondii HOM05D005128 ORTHO05D006227 4.0e-33 144.4 85 84.7
THA.LOC104814071 Tarenaya hassleriana HOM05D005128 ORTHO05D006227 4.0e-33 144.4 85 85.9
Hund11691 Selenicereus undatus HOM05D005128 ORTHO05D006227 5.2e-33 144.1 85 84.7
ATR0057G123 Amborella trichopoda HOM05D005128 ORTHO05D006227 6.8e-33 143.7 84 84.5
arahy.Tifrunner.gnm1.ann1.V0IP08 Arachis hypogaea HOM05D005128 ORTHO05D006227 8.9e-33 143.3 84 85.7
Medtr8g006725 Medicago truncatula HOM05D005128 ORTHO05D006227 8.9e-33 143.3 84 84.5
A06p32130 Brassica napus HOM05D005128 ORTHO05D006227 1.2e-32 142.9 84 84.5
C03p60810 Brassica napus HOM05D005128 ORTHO05D006227 1.2e-32 142.9 84 84.5
BolC3t18340H Brassica oleracea HOM05D005128 ORTHO05D006227 1.2e-32 142.9 84 84.5
BraA06t26141Z Brassica rapa HOM05D005128 ORTHO05D006227 1.2e-32 142.9 84 84.5
CDE11G0478 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 1.2e-32 142.9 82 86.6
AUR62023426 Chenopodium quinoa HOM05D005128 ORTHO05D006227 1.5e-32 142.5 85 82.4
Ah.05g173200 Amaranthus hybridus HOM05D005128 ORTHO05D006227 2.0e-32 142.1 85 82.4
Ca_14055_v3 Cicer arietinum L. HOM05D005128 ORTHO05D006227 2.6e-32 141.7 84 83.3
Lalb_Chr07g0195501 Lupinus albus HOM05D005128 ORTHO05D006227 2.6e-32 141.7 85 82.4
Lalb_Chr13g0304531 Lupinus albus HOM05D005128 ORTHO05D006227 2.6e-32 141.7 85 82.4
Lalb_Chr13g0304581 Lupinus albus HOM05D005128 ORTHO05D006227 2.6e-32 141.7 85 82.4
Lj3g0015662 Lotus japonicus HOM05D005128 ORTHO05D006227 3.4e-32 141.4 84 83.3
EL10Ac1g00782 Beta vulgaris HOM05D005128 ORTHO05D006227 4.4e-32 141.0 85 81.2
Lalb_Chr13g0304521 Lupinus albus HOM05D005128 ORTHO05D006227 5.8e-32 140.6 85 81.2
Lalb_Chr13g0304591 Lupinus albus HOM05D005128 ORTHO05D006227 5.8e-32 140.6 85 81.2
Eucgr.J01375 Eucalyptus grandis HOM05D005128 ORTHO05D006227 7.5e-32 140.2 85 81.2
FAN03G2425 Fragaria x ananassa HOM05D005128 ORTHO05D006227 7.5e-32 140.2 110 68.2
Glyma.07G112500 Glycine max HOM05D005128 ORTHO05D006227 9.8e-32 139.8 84 83.3
Medtr1g112900 Medicago truncatula HOM05D005128 ORTHO05D006227 9.8e-32 139.8 84 82.1
VMungo0331G0261 Vigna mungo HOM05D005128 ORTHO05D006227 9.8e-32 139.8 84 83.3
AUR62013728 Chenopodium quinoa HOM05D005128 ORTHO05D006227 1.3e-31 139.4 83 83.1
Glyma.03G114200 Glycine max HOM05D005128 ORTHO05D006227 1.3e-31 139.4 84 83.3
Eucgr.C04409 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.7e-31 139.0 85 81.2
Phvul.010G052100 Phaseolus vulgaris HOM05D005128 ORTHO05D006227 1.7e-31 139.0 84 83.3
Psat0s118g0040 Pisum sativum HOM05D005128 ORTHO05D006227 1.7e-31 139.0 84 82.1
Zm00001eb201920 Zea mays HOM05D005128 ORTHO05D006227 1.7e-31 139.0 87 80.5
Nn1g00897 Nelumbo nucifera HOM05D005128 ORTHO05D006227 2.9e-31 138.3 85 81.2
Os11g0557900 Oryza sativa ssp. japonica HOM05D005128 ORTHO05D006227 6.4e-31 137.1 87 78.2
TPR.G33121 Trifolium pratense HOM05D005128 ORTHO05D006227 6.4e-31 137.1 84 82.1
HanXRQChr16g0520301 Helianthus annuus HOM05D005128 ORTHO05D006227 1.4e-30 136.0 77 87.0
AT5G65274 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 1.6e-29 132.5 86 76.7
MD15G1416400 Malus domestica HOM05D005128 ORTHO05D006227 2.7e-29 131.7 99 71.7
MD07G1103100 Malus domestica HOM05D005128 ORTHO05D006227 6.0e-29 130.6 79 83.5
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 1.3e-28 129.4 82 76.8
Carub.0008s2615 Capsella rubella HOM05D005128 ORTHO05D006227 2.3e-28 128.6 86 74.4
Hund07697 Selenicereus undatus HOM05D005128 ORTHO05D006227 2.3e-28 128.6 80 81.2
AL8G42840 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 9.5e-27 123.2 86 73.3
Gohir.D11G020200 Gossypium hirsutum HOM05D005128 ORTHO05D006227 1.8e-25 119.0 83 69.9
Gorai.007G021500 Gossypium raimondii HOM05D005128 ORTHO05D006227 1.8e-25 119.0 83 69.9
Gohir.A13G167950 Gossypium hirsutum HOM05D005128 ORTHO05D006227 3.4e-24 114.8 85 64.7
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.3e-23 112.8 57 89.5
Sed0016493 Sechium edule HOM05D005128 ORTHO05D006227 6.4e-23 110.5 89 67.4
SEGI_29435 Sequoiadendron giganteum HOM05D005128 ORTHO05D006227 1.9e-22 109.0 76 69.7
SMO203G0150 Selaginella moellendorffii HOM05D005128 ORTHO05D006227 2.4e-22 108.6 77 67.5
Mapoly0006s0266 Marchantia polymorpha HOM05D005128 ORTHO05D006227 3.2e-22 108.2 86 58.1
AagrBONN_evm.TU.Sc2ySwM_369.249 Anthoceros agrestis HOM05D005128 ORTHO05D006227 7.1e-22 107.1 84 60.7
AagrBONN_evm.TU.Sc2ySwM_369.256 Anthoceros agrestis HOM05D005128 ORTHO05D006227 1.3e-20 102.8 86 60.5
Sc02g0003030 Simmondsia chinensis HOM05D005128 ORTHO05D006227 1.7e-20 102.4 56 85.7
SGA_v2.0_scaffold153G36917 Striga asiatica HOM05D005128 ORTHO05D006227 2.3e-20 102.1 87 70.1
Gorai.002G193300 Gossypium raimondii HOM05D005128 ORTHO05D006227 8.6e-20 100.1 85 58.8
FAN01G3136 Fragaria x ananassa HOM05D005128 ORTHO05D006227 2.5e-19 98.6 85 65.9
Pp3c15_3940 Physcomitrium patens HOM05D005128 ORTHO05D006227 3.3e-19 98.2 84 57.1
Hund17078 Selenicereus undatus HOM05D005128 ORTHO05D006227 1.2e-18 96.3 85 62.4
Gohir.D01G155933 Gossypium hirsutum HOM05D005128 ORTHO05D006227 5.2e-17 90.9 76 57.9
CiPaw.14G021600 Carya illinoinensis HOM05D005128 ORTHO05D006227 3.2e-14 81.6 92 56.5
MD07G1103500 Malus domestica HOM05D005128 ORTHO05D006227 7.1e-14 80.5 56 76.8
CDE02G2422 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 1.1e-09 66.6 33 90.9
Eucgr.L02413 Eucalyptus grandis HOM05D005128 ORTHO05D006227 3.1e-09 65.1 39 74.4
Gohir.A11G020500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 4.0e-09 64.7 47 70.2
Eucgr.E02797 Eucalyptus grandis HOM05D005128 ORTHO05D006227 6.9e-09 63.9 41 75.6
Eucgr.E04335 Eucalyptus grandis HOM05D005128 ORTHO05D006227 4.4e-08 61.2 39 71.8
TPR.G6976 Trifolium pratense HOM05D005128 ORTHO05D006227 4.4e-08 61.2 33 81.8


User provided reference genes

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