Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0025199g0010 Nicotiana tabacum HOM05D003245 ORTHO05D004125 5.9e-152 540.8 268 100.0
Nitab4.5_0007820g0020 Nicotiana tabacum HOM05D003245 ORTHO05D004125 6.2e-77 291.6 259 64.9
Nitab4.5_0004307g0020 Nicotiana tabacum HOM05D003245 ORTHO05D004125 1.1e-73 280.8 166 88.0
Nitab4.5_0024961g0010 Nicotiana tabacum HOM05D003245 ORTHO05D004125 5.5e-65 251.9 135 94.8
Nitab4.5_0026144g0010 Nicotiana tabacum HOM05D003245 ORTHO05D004125 1.9e-62 243.4 135 91.1
Solyc07g018210.3 Solanum lycopersicum HOM05D003245 ORTHO05D004125 3.7e-61 239.2 170 77.1
Solyc07g018220.3 Solanum lycopersicum HOM05D003245 ORTHO05D004125 3.7e-61 239.2 170 77.1
Sopen07g007320 Solanum pennellii HOM05D003245 ORTHO05D004125 1.8e-60 236.9 170 76.5
Sopen07g007330 Solanum pennellii HOM05D003245 ORTHO05D004125 1.8e-60 236.9 170 76.5
CAN.G32.5 Capsicum annuum HOM05D003245 ORTHO05D004125 2.0e-59 233.4 172 75.6
CAN.G5.10 Capsicum annuum HOM05D003245 ORTHO05D004125 3.4e-59 232.6 173 75.7
Peaxi162Scf00231g00812 Petunia axillaris HOM05D003245 ORTHO05D004125 2.5e-57 226.5 173 74.0
Dinv42729 Davidia involucrata HOM05D003245 ORTHO05D004125 3.0e-55 219.5 171 73.1
Dinv43372 Davidia involucrata HOM05D003245 ORTHO05D004125 3.0e-55 219.5 171 73.1
PGSC0003DMG400002422 Solanum tuberosum HOM05D003245 ORTHO05D004125 5.1e-55 218.8 170 73.5
PGSC0003DMG401002421 Solanum tuberosum HOM05D003245 ORTHO05D004125 1.1e-54 217.6 169 71.6
Nitab4.5_0006624g0030 Nicotiana tabacum HOM05D003245 ORTHO05D004125 1.3e-53 214.2 135 84.4
Hma1.2p1_2478F.1_g322920 Hydrangea macrophylla HOM05D003245 ORTHO05D004125 6.3e-53 211.8 172 70.3
Nitab4.5_0024961g0020 Nicotiana tabacum HOM05D003245 ORTHO05D049326 3.1e-52 209.5 108 92.6
Ciclev10009141m.g Citrus clementina HOM05D003245 ORTHO05D004125 5.3e-52 208.8 167 70.1
CANSAT11G2281 Cannabis sativa HOM05D003245 ORTHO05D004125 1.2e-51 207.6 171 67.3
ClCG01G005520 Citrullus lanatus HOM05D003245 ORTHO05D004125 1.2e-51 207.6 169 70.4
Oeu049685.1 Olea europaea HOM05D003245 ORTHO05D004125 1.2e-51 207.6 170 69.4
CARHR109400 Cardamine hirsuta HOM05D003245 ORTHO05D004125 2.6e-51 206.5 177 67.8
MELO3C005378.2 Cucumis melo HOM05D003245 ORTHO05D004125 2.6e-51 206.5 171 68.4
Hma1.2p1_1710F.1_g298640 Hydrangea macrophylla HOM05D003245 ORTHO05D004125 5.9e-51 205.3 168 69.6
THA.LOC104819980 Tarenaya hassleriana HOM05D003245 ORTHO05D004125 1.3e-50 204.1 173 68.8
CsaV3_5G005750 Cucumis sativus L. HOM05D003245 ORTHO05D004125 2.9e-50 203.0 171 67.8
AT2G18840 Arabidopsis thaliana HOM05D003245 ORTHO05D004125 3.8e-50 202.6 176 68.2
Cpa.g.sc95.57 Carica papaya HOM05D003245 ORTHO05D004125 3.8e-50 202.6 171 67.3
Carub.0007s1035 Capsella rubella HOM05D003245 ORTHO05D004125 5.0e-50 202.2 173 67.1
Sed0003509 Sechium edule HOM05D003245 ORTHO05D004125 1.9e-49 200.3 171 68.4
AL3G53110 Arabidopsis lyrata HOM05D003245 ORTHO05D004125 2.5e-49 199.9 172 68.0
Carub.0003s3307 Capsella rubella HOM05D003245 ORTHO05D004125 3.2e-49 199.5 179 66.5
THA.LOC104803937 Tarenaya hassleriana HOM05D003245 ORTHO05D004125 3.2e-49 199.5 175 66.9
TWI12G0523 Tripterygium wilfordii HOM05D003245 ORTHO05D004125 4.2e-49 199.1 175 66.9
Potri.006G169200 Populus trichocarpa HOM05D003245 ORTHO05D004125 5.5e-49 198.7 173 68.8
Potri.018G093800 Populus trichocarpa HOM05D003245 ORTHO05D004125 7.2e-49 198.4 172 68.0
Aa31LG8G15930 Aethionema arabicum HOM05D003245 ORTHO05D004125 1.2e-48 197.6 176 65.9
TAR626G1505 Trochodendron aralioides HOM05D003245 ORTHO05D004125 1.6e-48 197.2 171 66.7
Prupe.1G086600 Prunus persica HOM05D003245 ORTHO05D004125 2.1e-48 196.8 169 66.9
TWI12G0425 Tripterygium wilfordii HOM05D003245 ORTHO05D004125 3.6e-48 196.1 170 66.5
CiPaw.08G036800 Carya illinoinensis HOM05D003245 ORTHO05D004125 7.9e-48 194.9 171 67.3
Lj4g0022126 Lotus japonicus HOM05D003245 ORTHO05D004125 2.3e-47 193.4 167 64.1
Lalb_Chr07g0180421 Lupinus albus HOM05D003245 ORTHO05D004125 3.9e-47 192.6 170 64.7
Sp7g28140 Schrenkiella parvula HOM05D003245 ORTHO05D004125 3.9e-47 192.6 177 63.8
Sed0004345 Sechium edule HOM05D003245 ORTHO05D004125 3.9e-47 192.6 169 67.5
PSO675G6578 Papaver somniferum HOM05D003245 ORTHO05D004125 6.7e-47 191.8 177 62.7
AT4G30260 Arabidopsis thaliana HOM05D003245 ORTHO05D004125 8.8e-47 191.4 172 65.1
PSO541G0246 Papaver somniferum HOM05D003245 ORTHO05D004125 8.8e-47 191.4 177 62.7
BcaC01g01161 Brassica carinata HOM05D003245 ORTHO05D004125 1.5e-46 190.7 172 64.0
BraA08t33893Z Brassica rapa HOM05D003245 ORTHO05D004125 2.6e-46 189.9 172 64.0
Sp3g32300 Schrenkiella parvula HOM05D003245 ORTHO05D004125 2.6e-46 189.9 175 64.6
Dinv41253 Davidia involucrata HOM05D003245 ORTHO05D004125 3.3e-46 189.5 166 65.1
CARHR238170 Cardamine hirsuta HOM05D003245 ORTHO05D004125 4.4e-46 189.1 177 63.8
A08p19320 Brassica napus HOM05D003245 ORTHO05D004125 5.7e-46 188.7 172 63.4
Thhalv10025913m.g Eutrema salsugineum HOM05D003245 ORTHO05D004125 5.7e-46 188.7 177 63.3
PGR102G0922 Punica granatum HOM05D003245 ORTHO05D004125 5.7e-46 188.7 171 63.2
TAR383G0562 Trochodendron aralioides HOM05D003245 ORTHO05D004125 5.7e-46 188.7 171 65.5
SalBow6G0700 Salvia bowleyana HOM05D003245 ORTHO05D004125 7.4e-46 188.3 169 62.1
SalBow6G1711 Salvia bowleyana HOM05D003245 ORTHO05D004125 7.4e-46 188.3 169 62.1
Sabra18G0080700 Salix brachista HOM05D003245 ORTHO05D004125 9.7e-46 188.0 172 65.7
Lsat_1_v5_gn_7_54500 Lactuca sativa HOM05D003245 ORTHO05D004125 1.7e-45 187.2 175 64.0
Lj7A472T61 Lonicera japonica HOM05D003245 ORTHO05D004125 1.7e-45 187.2 170 64.1
Actinidia35994 Actinidia chinensis HOM05D003245 ORTHO05D004125 2.8e-45 186.4 171 66.7
CDE02G4007 Ceratophyllum demersum HOM05D003245 ORTHO05D004125 3.7e-45 186.0 171 63.2
HanXRQChr09g0254481 Helianthus annuus HOM05D003245 ORTHO05D004125 4.8e-45 185.7 167 65.3
BcaNung03004 Brassica carinata HOM05D003245 ORTHO05D004125 6.3e-45 185.3 178 62.4
EL10Ac8g19425 Beta vulgaris HOM05D003245 ORTHO05D004125 8.2e-45 184.9 170 65.3
Manes.06G024000 Manihot esculenta HOM05D003245 ORTHO05D004125 1.1e-44 184.5 170 65.3
Sabra06G0130400 Salix brachista HOM05D003245 ORTHO05D004125 1.1e-44 184.5 172 65.1
HanXRQChr09g0245001 Helianthus annuus HOM05D003245 ORTHO05D004125 1.8e-44 183.7 169 61.5
TPR.G5416 Trifolium pratense HOM05D003245 ORTHO05D004125 1.8e-44 183.7 176 61.9
Atru.chr7.659 Acer truncatum HOM05D003245 ORTHO05D004125 2.4e-44 183.3 176 64.8
MSTRG.19702 Avicennia marina HOM05D003245 ORTHO05D004125 3.1e-44 183.0 184 60.9
RcHm_v2.0_Chr4g0402611 Rosa chinensis HOM05D003245 ORTHO05D004125 4.1e-44 182.6 172 64.0
C03p88780 Brassica napus HOM05D003245 ORTHO05D004125 9.1e-44 181.4 176 63.6
vmacro13120 Vaccinium macrocarpon HOM05D003245 ORTHO05D004125 9.1e-44 181.4 174 63.8
AL7G21890 Arabidopsis lyrata HOM05D003245 ORTHO05D004125 1.2e-43 181.0 174 62.1
Nitab4.5_0006624g0010 Nicotiana tabacum HOM05D003245 ORTHO05D049326 1.2e-43 181.0 108 85.2
SGA_v2.0_scaffold66G22455 Striga asiatica HOM05D003245 ORTHO05D004125 1.2e-43 181.0 175 62.3
QL02p097606 Quercus lobata HOM05D003245 ORTHO05D004125 1.5e-43 180.6 176 62.5
GSVIVG01029199001 Vitis vinifera HOM05D003245 ORTHO05D004125 1.5e-43 180.6 170 63.5
AUR62040631 Chenopodium quinoa HOM05D003245 ORTHO05D004125 2.6e-43 179.9 171 63.2
CiPaw.07G191800 Carya illinoinensis HOM05D003245 ORTHO05D004125 1.0e-42 177.9 171 62.6
Manes.14G150500 Manihot esculenta HOM05D003245 ORTHO05D004125 1.0e-42 177.9 170 62.9
Aqoxy1G01965 Aquilegia oxysepala HOM05D003245 ORTHO05D004125 1.3e-42 177.6 182 59.3
BcaC09g51810 Brassica carinata HOM05D003245 ORTHO05D004125 1.3e-42 177.6 170 62.4
C01p08790 Brassica napus HOM05D003245 ORTHO05D004125 1.3e-42 177.6 170 62.4
BolC1t00869H Brassica oleracea HOM05D003245 ORTHO05D004125 1.3e-42 177.6 170 62.4
CSS0020996 Camellia sinensis var. sinensis HOM05D003245 ORTHO05D004125 1.3e-42 177.6 198 55.6
Migut.J01473 Erythranthe guttata HOM05D003245 ORTHO05D004125 2.2e-42 176.8 172 62.2
Migut.K00245 Erythranthe guttata HOM05D003245 ORTHO05D004125 3.8e-42 176.0 178 59.6
Ca_21218_v3 Cicer arietinum L. HOM05D003245 ORTHO05D004125 5.0e-42 175.6 170 60.6
MBI14_g17360_MAGBIO Magnolia biondii HOM05D003245 ORTHO05D004125 5.0e-42 175.6 168 60.1
Ah.08g212150 Amaranthus hybridus HOM05D003245 ORTHO05D004125 1.1e-41 174.5 175 62.3
Rhsim01G0005500 Rhododendron simsii HOM05D003245 ORTHO05D004125 1.1e-41 174.5 171 62.6
BolC3t21189H Brassica oleracea HOM05D003245 ORTHO05D004125 1.4e-41 174.1 172 61.0
Cc06_g13310 Coffea canephora HOM05D003245 ORTHO05D004125 2.5e-41 173.3 164 64.0
FvH4_4g09840 Fragaria vesca HOM05D003245 ORTHO05D004125 2.5e-41 173.3 169 60.9
FAN12G1523 Fragaria x ananassa HOM05D003245 ORTHO05D004125 2.5e-41 173.3 169 60.9
FAN12G3343 Fragaria x ananassa HOM05D003245 ORTHO05D004125 2.5e-41 173.3 169 60.9
BraA01t00734Z Brassica rapa HOM05D003245 ORTHO05D004125 3.2e-41 172.9 170 61.8
CSS0017554 Camellia sinensis var. sinensis HOM05D003245 ORTHO05D004125 3.2e-41 172.9 170 60.0
Hund22399 Selenicereus undatus HOM05D003245 ORTHO05D004125 3.2e-41 172.9 177 60.5
FAN22G0867 Fragaria x ananassa HOM05D003245 ORTHO05D004125 5.5e-41 172.2 166 61.4
Sopen07g007350 Solanum pennellii HOM05D003245 ORTHO05D004125 5.5e-41 172.2 139 71.9
DCAR_014704 Daucus carota HOM05D006247 ORTHO05D007684 7.2e-41 171.8 162 62.3
Duzib160G0168 Durio zibethinus HOM05D003245 ORTHO05D004125 7.2e-41 171.8 172 59.9
Lsat_1_v5_gn_8_67041 Lactuca sativa HOM05D003245 ORTHO05D004125 9.4e-41 171.4 176 58.5
Medtr4g128290 Medicago truncatula HOM05D003245 ORTHO05D004125 9.4e-41 171.4 172 59.3
Duzib192G0054 Durio zibethinus HOM05D003245 ORTHO05D004125 1.2e-40 171.0 169 59.8
Os01g0867700 Oryza sativa ssp. japonica HOM05D003245 ORTHO05D004125 2.7e-40 169.9 168 61.3
A01p07880 Brassica napus HOM05D003245 ORTHO05D004125 3.6e-40 169.5 170 60.6
ECA236G4509 Erigeron canadensis HOM05D003245 ORTHO05D004125 3.6e-40 169.5 177 63.3
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 4.7e-40 169.1 170 60.0
Thecc.06G060900 Theobroma cacao HOM05D003245 ORTHO05D004125 6.1e-40 168.7 171 59.6
arahy.Tifrunner.gnm1.ann1.6TSM6Q Arachis hypogaea HOM05D003245 ORTHO05D004125 1.4e-39 167.5 168 58.9
arahy.Tifrunner.gnm1.ann1.LWG93W Arachis hypogaea HOM05D003245 ORTHO05D004125 1.4e-39 167.5 168 58.9
Duzib235G0677 Durio zibethinus HOM05D003245 ORTHO05D004125 1.4e-39 167.5 170 59.4
MBI16_g35929_MAGBIO Magnolia biondii HOM05D000126 ORTHO05D000085 1.4e-39 167.5 170 59.4
ATR0580G426 Amborella trichopoda HOM05D003245 ORTHO05D004125 1.8e-39 167.2 174 57.5
HanXRQChr12g0365401 Helianthus annuus HOM05D003245 ORTHO05D004125 3.0e-39 166.4 175 60.0
Gohir.D05G114100 Gossypium hirsutum HOM05D003245 ORTHO05D004125 3.9e-39 166.0 170 59.4
Gorai.009G118100 Gossypium raimondii HOM05D003245 ORTHO05D004125 3.9e-39 166.0 170 59.4
ECA240G1971 Erigeron canadensis HOM05D003245 ORTHO05D004125 8.8e-39 164.9 174 58.6
Gohir.A05G113700 Gossypium hirsutum HOM05D003245 ORTHO05D004125 2.0e-38 163.7 170 58.8
HPP92_003207 Vanilla planifolia HOM05D003245 ORTHO05D004125 2.0e-38 163.7 177 56.5
VMungo1215G1658 Vigna mungo HOM05D003245 ORTHO05D004125 2.0e-38 163.7 180 58.3
MSTRG.26224 Avicennia marina HOM05D003245 ORTHO05D004125 4.4e-38 162.5 174 58.0
Cfa013513 Carpinus fangiana HOM05D003245 ORTHO05D004125 7.4e-38 161.8 178 57.3
SGA_v2.0_scaffold12G06064 Striga asiatica HOM05D003245 ORTHO05D004125 1.3e-37 161.0 166 56.6
BcaB03g12640 Brassica carinata HOM05D003245 ORTHO05D004125 1.7e-37 160.6 180 56.7
Lj9C686G6 Lonicera japonica HOM05D003245 ORTHO05D004125 2.2e-37 160.2 165 60.6
SGA_v2.0_scaffold17G07907 Striga asiatica HOM05D003245 ORTHO05D004125 2.2e-37 160.2 169 56.8
MSTRG.6209 Avicennia marina HOM05D003245 ORTHO05D004125 3.7e-37 159.5 179 54.2
Sc18g0007470 Simmondsia chinensis HOM05D003245 ORTHO05D004125 3.7e-37 159.5 169 59.2
Phvul.003G146500 Phaseolus vulgaris HOM05D003245 ORTHO05D004125 4.8e-37 159.1 171 58.5
Haze_22109 Corylus avellana HOM05D003245 ORTHO05D004125 6.3e-37 158.7 173 57.8
MD13G1256000 Malus domestica HOM05D003245 ORTHO05D004125 6.3e-37 158.7 169 57.4
Glyma.17G064000 Glycine max HOM05D003245 ORTHO05D004125 8.2e-37 158.3 171 57.3
MD13G1256300 Malus domestica HOM05D003245 ORTHO05D004125 1.4e-36 157.5 169 56.8
FAN07G1981 Fragaria x ananassa HOM05D003245 ORTHO05D004125 1.8e-36 157.1 218 47.7
SEGI_27058 Sequoiadendron giganteum HOM05D003245 ORTHO05D004125 5.3e-36 155.6 174 55.7
Lalb_Chr12g0199351 Lupinus albus HOM05D003245 ORTHO05D004125 1.6e-35 154.1 168 58.3
unitig_22.g6851 Utricularia gibba HOM05D003245 ORTHO05D004125 2.0e-35 153.7 166 57.2
Oeu042156.1 Olea europaea HOM05D003245 ORTHO05D004125 5.9e-35 152.1 172 55.8
Zm00001eb366670 Zea mays HOM05D003245 ORTHO05D004125 7.7e-35 151.8 168 58.3
Glyma.13G096100 Glycine max HOM05D003245 ORTHO05D004125 2.2e-34 150.2 173 56.1
Zm00001eb146670 Zea mays HOM05D003245 ORTHO05D004125 5.0e-34 149.1 168 56.0
Solyc07g018230.2 Solanum lycopersicum HOM05D003245 ORTHO05D004125 1.5e-33 147.5 135 63.7
CDE04G1421 Ceratophyllum demersum HOM05D000126 ORTHO05D000085 1.9e-33 147.1 170 53.5
HPP92_001091 Vanilla planifolia HOM05D003245 ORTHO05D004125 1.4e-31 141.0 181 51.9
unitig_8.g3424 Utricularia gibba HOM05D003245 ORTHO05D004125 5.7e-30 135.6 166 54.2
Os05g0437500 Oryza sativa ssp. japonica HOM05D003245 ORTHO05D004125 3.7e-29 132.9 171 52.6
SalBow1G7127 Salvia bowleyana HOM05D003245 ORTHO05D004125 3.1e-28 129.8 167 50.9
Zm00001eb289090 Zea mays HOM05D003245 ORTHO05D004125 1.7e-26 124.0 133 56.4
Gohir.A10G003200 Gossypium hirsutum HOM05D003245 ORTHO05D004125 4.0e-23 112.8 170 48.2
Gorai.011G003600 Gossypium raimondii HOM05D003245 ORTHO05D004125 4.0e-23 112.8 171 48.0
Gohir.D10G003200 Gossypium hirsutum HOM05D003245 ORTHO05D004125 5.2e-23 112.5 170 48.2
C01p16400 Brassica napus HOM05D003245 ORTHO05D017662 4.4e-22 109.4 81 69.1
SMO146G0102 Selaginella moellendorffii HOM05D003245 ORTHO05D004125 4.8e-21 105.9 174 42.0
Pp3c7_23160 Physcomitrium patens HOM05D003245 ORTHO05D004125 9.1e-20 101.7 166 43.4
Pp3c7_23220 Physcomitrium patens HOM05D003245 ORTHO05D004125 9.1e-20 101.7 166 43.4
Dinv23253 Davidia involucrata HOM05D003245 ORTHO05D004125 1.2e-19 101.3 129 51.2
Pp3c11_7990 Physcomitrium patens HOM05D003245 ORTHO05D004125 1.6e-19 100.9 166 44.6
GSVIVG01016111001 Vitis vinifera HOM05D003245 ORTHO05D004125 2.7e-19 100.1 132 47.0
Mapoly0113s0010 Marchantia polymorpha HOM05D003245 ORTHO05D004125 1.7e-18 97.4 174 40.8
RcHm_v2.0_Chr5g0045341 Rosa chinensis HOM05D003245 ORTHO05D004125 1.5e-17 94.4 128 50.0
RcHm_v2.0_Chr2g0110911 Rosa chinensis HOM05D003245 ORTHO05D004125 4.2e-17 92.8 170 44.1
CBR_g23822 Chara braunii HOM05D003245 ORTHO05D004125 1.6e-16 90.9 155 45.2
BolC9t56073H Brassica oleracea HOM05D003245 ORTHO05D004125 4.7e-16 89.4 138 48.6
HPP92_001991 Vanilla planifolia HOM05D000154 ORTHO05D000092 2.3e-10 70.5 182 37.4
BcaC04g20174 Brassica carinata HOM05D003245 ORTHO05D014500 1.1e-09 68.2 54 66.7
C05p42900 Brassica napus HOM05D003245 ORTHO05D017662 1.9e-09 67.4 54 64.8
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 2.5e-09 67.0 54 64.8
BcaC05g28230 Brassica carinata HOM05D003245 ORTHO05D004125 5.6e-09 65.9 51 68.6
Psat4g011760 Pisum sativum HOM05D003245 ORTHO05D004125 8.0e-08 62.0 158 32.3
C02p47120 Brassica napus HOM05D003245 ORTHO05D020083 3.4e-06 56.6 54 53.7
BolC2t10758H Brassica oleracea HOM05D003245 ORTHO05D020083 3.4e-06 56.6 54 53.7
C09p29690 Brassica napus HOM05D025430 ORTHO05D020083 5.8e-06 55.8 42 61.9


User provided reference genes

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