Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.8e-117 425.2 206 100.0
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 3.0e-103 378.6 212 89.2
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 9.6e-94 347.1 171 99.4
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 9.9e-91 337.0 171 95.9
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 2.9e-90 335.5 171 95.3
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 6.4e-90 334.3 171 94.7
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 1.1e-89 333.6 171 94.2
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 4.9e-82 308.1 171 85.4
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.1e-81 307.0 222 70.7
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 9.3e-81 303.9 171 86.0
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 3.5e-80 302.0 171 84.8
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 7.9e-80 300.8 171 85.4
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.3e-79 300.1 171 83.6
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 1.3e-79 300.1 171 85.4
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.3e-79 300.1 167 86.2
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 1.8e-79 299.7 172 84.9
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 5.1e-79 298.1 171 84.2
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 6.7e-79 297.7 171 83.6
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 8.7e-79 297.4 170 84.1
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.1e-78 297.0 187 79.7
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 1.5e-78 296.6 223 67.3
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 1.5e-78 296.6 171 83.0
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.9e-78 296.2 171 83.6
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 1.9e-78 296.2 171 83.6
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 2.5e-78 295.8 223 67.7
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.3e-78 295.0 171 83.6
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 9.7e-78 293.9 198 73.2
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.6e-77 293.1 173 83.2
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.6e-77 293.1 171 81.9
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 1.6e-77 293.1 171 81.9
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 1.6e-77 293.1 167 85.0
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 2.8e-77 292.4 171 82.5
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.8e-77 292.4 171 81.9
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 3.7e-77 292.0 171 80.1
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 4.8e-77 291.6 167 81.4
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 4.8e-77 291.6 171 80.7
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 6.3e-77 291.2 171 82.5
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 1.1e-76 290.4 167 82.0
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.1e-76 290.4 171 84.8
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 1.1e-76 290.4 175 79.4
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 2.4e-76 289.3 171 81.3
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 2.4e-76 289.3 203 72.4
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 3.1e-76 288.9 167 80.8
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 3.1e-76 288.9 171 84.2
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 4.1e-76 288.5 173 82.1
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 4.1e-76 288.5 171 84.2
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 5.3e-76 288.1 186 76.9
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 5.3e-76 288.1 198 74.2
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 6.9e-76 287.7 171 83.6
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.2e-75 287.0 167 83.2
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 1.5e-75 286.6 171 80.7
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 1.5e-75 286.6 201 72.1
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.5e-75 286.6 171 82.5
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 2.0e-75 286.2 171 80.7
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.0e-75 286.2 198 72.2
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 2.0e-75 286.2 173 80.9
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.0e-75 286.2 173 80.9
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.0e-75 286.2 171 81.3
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 2.6e-75 285.8 171 81.9
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 3.4e-75 285.4 171 80.7
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 4.5e-75 285.0 171 80.1
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 4.5e-75 285.0 198 72.2
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 4.5e-75 285.0 171 81.3
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 5.9e-75 284.6 171 81.9
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 5.9e-75 284.6 173 80.3
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 7.6e-75 284.3 173 81.5
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 7.6e-75 284.3 171 83.0
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 7.6e-75 284.3 171 79.5
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 7.6e-75 284.3 172 79.1
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 7.6e-75 284.3 175 78.3
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 1.0e-74 283.9 171 79.5
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 1.0e-74 283.9 171 79.5
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 1.0e-74 283.9 171 81.3
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.0e-74 283.9 173 80.3
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.7e-74 283.1 167 81.4
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 1.7e-74 283.1 171 80.1
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 1.7e-74 283.1 171 80.1
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 2.9e-74 282.3 171 80.7
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 2.9e-74 282.3 171 82.5
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 3.8e-74 282.0 174 79.3
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 5.0e-74 281.6 171 77.2
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 5.0e-74 281.6 171 80.1
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 6.5e-74 281.2 174 77.0
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 6.5e-74 281.2 171 78.4
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 8.5e-74 280.8 171 76.6
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 8.5e-74 280.8 171 76.6
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 8.5e-74 280.8 171 76.6
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 8.5e-74 280.8 171 80.1
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.1e-73 280.4 174 78.7
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 1.1e-73 280.4 171 80.1
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 1.4e-73 280.0 174 76.4
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 1.9e-73 279.6 167 80.2
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 1.9e-73 279.6 173 78.6
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 2.5e-73 279.3 171 78.9
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 2.5e-73 279.3 171 79.5
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 4.2e-73 278.5 171 79.5
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 1.2e-72 276.9 171 75.4
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 1.2e-72 276.9 171 75.4
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.6e-72 276.6 171 78.9
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 1.6e-72 276.6 171 78.9
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 1.6e-72 276.6 171 76.6
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 2.7e-72 275.8 167 80.8
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 3.6e-72 275.4 167 81.4
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 3.6e-72 275.4 174 77.0
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 3.6e-72 275.4 171 78.4
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 4.6e-72 275.0 171 79.5
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 6.1e-72 274.6 171 75.4
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 6.1e-72 274.6 170 80.6
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 7.9e-72 274.2 171 78.4
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 3.9e-71 271.9 171 78.9
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.5e-70 270.0 171 80.1
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 3.3e-70 268.9 175 78.3
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 4.3e-70 268.5 171 76.6
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 4.3e-70 268.5 171 76.6
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 3.1e-68 262.3 171 76.6
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.9e-68 261.2 180 72.8
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.9e-66 255.8 173 74.0
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 5.0e-66 255.0 171 72.5
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 2.5e-65 252.7 171 73.7
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 2.5e-65 252.7 171 74.3
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 2.7e-64 249.2 171 71.9
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 7.9e-64 247.7 171 71.9
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 2.2e-61 239.6 171 69.0
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.4e-60 236.9 185 67.0
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 2.2e-58 229.6 169 68.0
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 2.1e-56 223.0 168 66.7
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.0e-55 219.2 140 76.4
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 1.5e-54 216.9 203 58.1
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 5.7e-54 214.9 171 64.9
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 4.5e-51 205.3 129 78.3
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 7.7e-51 204.5 127 78.7
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 2.2e-50 203.0 120 83.3
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.7e-48 196.1 168 57.7
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 1.8e-47 193.4 174 56.9
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.2e-43 180.6 134 69.4
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.0e-43 179.9 156 60.9
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 5.5e-41 171.8 99 83.8
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 3.4e-38 162.5 173 50.3
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 8.3e-37 157.9 183 52.5
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 8.9e-31 137.9 81 80.2
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 1.5e-30 137.1 85 77.6
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 1.6e-27 127.1 173 46.2
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 1.7e-26 123.6 97 61.9
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 2.5e-25 119.8 143 48.3
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 4.4e-22 109.0 62 77.4
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 1.2e-19 100.9 171 36.8
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 5.0e-18 95.5 180 35.6
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 7.8e-11 71.6 120 39.2
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.2e-08 64.3 33 81.8
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.1e-08 63.5 33 81.8
Nitab4.5_0000138g0110 Nicotiana tabacum HOM05D003829 ORTHO05D283026 1.8e-07 60.5 31 87.1
Lsat_1_v5_gn_1_100681 Lactuca sativa HOM05D003829 ORTHO05D228871 5.2e-07 58.9 33 81.8


User provided reference genes

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