Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.8e-119 432.6 212 100.0
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.1e-103 380.2 212 89.2
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.3e-90 335.9 190 88.9
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 2.4e-87 325.9 190 85.8
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 6.9e-87 324.3 190 85.3
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 1.5e-86 323.2 190 84.7
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 2.6e-86 322.4 190 84.2
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 6.9e-79 297.7 190 76.8
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.3e-77 293.5 190 76.8
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 2.2e-77 292.7 190 76.8
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 8.4e-77 290.8 190 75.8
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 1.4e-76 290.0 190 76.8
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.9e-76 289.7 190 75.3
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.9e-76 289.7 190 76.3
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 5.4e-76 288.1 186 76.9
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 5.4e-76 288.1 190 76.3
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 7.1e-76 287.7 190 75.8
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 9.3e-76 287.3 190 75.3
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 9.3e-76 287.3 190 75.8
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.1e-75 286.2 206 72.3
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 2.1e-75 286.2 190 74.7
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.7e-75 285.8 190 75.3
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 2.7e-75 285.8 189 75.1
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 6.0e-75 284.6 190 75.3
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 1.0e-74 283.9 190 74.2
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.3e-74 282.7 192 75.0
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 2.3e-74 282.7 190 73.7
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 2.3e-74 282.7 207 70.0
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 3.0e-74 282.3 212 67.0
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 3.9e-74 282.0 190 74.2
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 3.9e-74 282.0 190 73.2
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 3.9e-74 282.0 190 72.6
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 5.1e-74 281.6 186 75.3
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 5.1e-74 281.6 190 72.1
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 6.7e-74 281.2 190 73.2
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 6.7e-74 281.2 190 73.2
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 1.5e-73 280.0 190 73.7
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 1.5e-73 280.0 194 71.6
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 1.9e-73 279.6 190 73.2
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 2.5e-73 279.3 186 73.7
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.5e-73 279.3 190 75.8
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 5.6e-73 278.1 190 75.8
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 7.4e-73 277.7 186 72.6
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 7.4e-73 277.7 190 75.3
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 1.3e-72 276.9 190 73.7
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.6e-72 276.6 190 74.7
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 2.1e-72 276.2 194 71.6
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 2.1e-72 276.2 190 74.2
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 2.1e-72 276.2 197 71.6
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.8e-72 275.8 186 74.7
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 3.7e-72 275.4 190 72.1
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 3.7e-72 275.4 212 67.5
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 3.7e-72 275.4 190 73.7
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 4.8e-72 275.0 190 73.7
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 4.8e-72 275.0 190 72.1
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 4.8e-72 275.0 190 72.6
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 4.8e-72 275.0 190 72.6
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 6.2e-72 274.6 184 74.5
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 6.2e-72 274.6 190 72.6
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.2e-72 274.6 190 72.6
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 6.2e-72 274.6 190 73.2
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 8.1e-72 274.2 190 73.7
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 1.1e-71 273.9 190 71.6
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 1.1e-71 273.9 191 71.2
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 1.4e-71 273.5 190 71.6
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 1.4e-71 273.5 190 71.6
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 1.8e-71 273.1 190 71.1
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 1.8e-71 273.1 190 74.2
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.8e-71 273.1 190 72.1
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 1.8e-71 273.1 190 71.1
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 1.8e-71 273.1 194 70.1
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 2.4e-71 272.7 190 72.6
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 2.4e-71 272.7 190 73.2
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 2.4e-71 272.7 190 72.1
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 3.1e-71 272.3 190 72.1
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 4.0e-71 271.9 186 73.1
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 4.0e-71 271.9 190 72.6
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 4.0e-71 271.9 190 71.6
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 5.3e-71 271.6 190 70.5
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 6.9e-71 271.2 190 69.5
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 6.9e-71 271.2 190 72.1
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 6.9e-71 271.2 190 73.7
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 1.2e-70 270.4 190 68.9
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.2e-70 270.4 190 68.9
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 1.2e-70 270.4 190 68.9
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 1.2e-70 270.4 190 72.1
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.5e-70 270.0 190 71.6
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 1.5e-70 270.0 190 70.0
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 1.5e-70 270.0 207 65.7
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 1.5e-70 270.0 190 72.1
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 2.0e-70 269.6 220 63.6
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 2.6e-70 269.2 186 72.6
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 3.4e-70 268.9 190 69.5
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 3.4e-70 268.9 194 70.1
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 4.5e-70 268.5 190 71.1
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 4.5e-70 268.5 186 72.0
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 5.8e-70 268.1 190 71.6
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 1.7e-69 266.5 190 67.9
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 1.7e-69 266.5 190 67.9
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.7e-69 266.5 190 71.1
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 2.2e-69 266.2 190 71.1
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 2.2e-69 266.2 190 68.9
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 2.9e-69 265.8 186 73.7
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 8.4e-69 264.2 190 67.9
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 8.4e-69 264.2 190 70.0
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 8.4e-69 264.2 190 70.0
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.1e-68 263.8 190 71.1
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 1.1e-68 263.8 189 72.5
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 1.9e-68 263.1 190 70.0
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 9.3e-68 260.8 190 70.5
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 4.6e-67 258.5 190 71.6
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 6.0e-67 258.1 190 68.9
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 1.0e-66 257.3 192 70.3
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 1.0e-66 257.3 190 68.4
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 4.3e-65 251.9 190 68.9
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.6e-64 250.0 199 65.8
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 5.3e-63 245.0 197 64.0
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 5.3e-63 245.0 192 66.7
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 1.2e-62 243.8 190 66.8
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 2.0e-62 243.0 190 66.8
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 2.2e-61 239.6 190 64.7
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 1.1e-60 237.3 190 64.7
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 2.3e-58 229.6 197 60.9
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 2.8e-56 222.6 153 73.9
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 6.9e-55 218.0 188 60.6
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 5.0e-53 211.8 184 60.3
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 6.5e-53 211.5 190 61.1
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 9.4e-52 207.6 156 67.9
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 7.9e-51 204.5 205 55.1
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 8.2e-48 194.5 150 67.3
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 1.1e-47 194.1 146 68.5
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 3.1e-47 192.6 139 71.9
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.3e-45 187.2 196 51.0
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 6.5e-45 184.9 210 50.5
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.0e-42 177.6 99 86.9
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 1.7e-40 170.2 153 60.8
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.7e-37 160.2 118 69.5
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 2.7e-35 152.9 190 45.8
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 2.0e-33 146.7 202 47.5
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 9.1e-31 137.9 81 80.2
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 2.0e-30 136.7 94 72.3
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 8.8e-26 121.3 205 40.5
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 3.1e-23 112.8 116 51.7
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 4.5e-22 109.0 62 77.4
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 4.5e-22 109.0 160 42.5
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 2.0e-17 93.6 190 32.6
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.3e-16 88.6 199 32.2
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 8.0e-11 71.6 120 39.2
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.3e-08 64.3 33 81.8
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.2e-08 63.5 33 81.8
Lsat_1_v5_gn_1_100681 Lactuca sativa HOM05D003829 ORTHO05D228871 5.4e-07 58.9 33 81.8


User provided reference genes

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