Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0020695g0020 Nicotiana tabacum HOM05D003169 ORTHO05D036887 1.2e-85 319.7 156 100.0
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 6.4e-50 201.1 131 77.9
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.4e-49 199.9 131 77.1
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 5.5e-33 144.8 131 58.0
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 5.5e-33 144.8 131 58.0
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 2.7e-32 142.5 131 58.0
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 1.8e-31 139.8 131 57.3
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 7.4e-30 134.4 127 54.3
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 3.7e-29 132.1 120 56.7
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 2.4e-28 129.4 128 52.3
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 1.2e-27 127.1 132 50.8
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 4.5e-27 125.2 127 52.0
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 5.9e-27 124.8 128 49.2
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.0e-26 124.0 127 50.4
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.0e-26 124.0 127 50.4
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.0e-26 124.0 150 46.0
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.3e-26 123.6 127 50.4
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.7e-26 123.2 99 59.6
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 1.7e-26 123.2 132 50.0
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 2.9e-26 122.5 127 50.4
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 5.0e-26 121.7 131 49.6
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 6.5e-26 121.3 132 48.5
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 8.5e-26 120.9 120 52.5
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.1e-25 120.6 127 48.8
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 1.1e-25 120.6 127 49.6
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 1.9e-25 119.8 127 49.6
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 1.9e-25 119.8 127 49.6
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.9e-25 119.8 121 51.2
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 1.9e-25 119.8 121 51.2
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 2.5e-25 119.4 100 60.0
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 3.2e-25 119.0 127 46.5
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 7.2e-25 117.9 120 50.8
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 1.2e-24 117.1 99 55.6
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.6e-24 116.7 127 48.0
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.6e-24 116.7 127 48.0
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 1.6e-24 116.7 127 48.0
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 2.1e-24 116.3 127 48.0
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 2.7e-24 115.9 127 47.2
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 3.6e-24 115.5 127 46.5
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 3.6e-24 115.5 128 47.7
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 3.6e-24 115.5 120 49.2
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 3.6e-24 115.5 120 50.8
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 4.7e-24 115.2 128 46.1
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 4.7e-24 115.2 121 49.6
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 6.1e-24 114.8 127 49.6
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 6.1e-24 114.8 127 47.2
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 1.4e-23 113.6 127 45.7
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 1.4e-23 113.6 120 50.0
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 1.8e-23 113.2 120 49.2
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 3.9e-23 112.1 128 44.5
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 3.9e-23 112.1 134 45.5
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 5.1e-23 111.7 134 44.8
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 5.1e-23 111.7 134 44.8
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 5.1e-23 111.7 134 44.8
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 5.1e-23 111.7 134 44.8
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 5.1e-23 111.7 134 44.8
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 5.1e-23 111.7 127 47.2
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 5.1e-23 111.7 127 47.2
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 8.8e-23 110.9 120 47.5
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 1.1e-22 110.5 127 48.0
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 1.1e-22 110.5 134 44.0
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.1e-22 110.5 120 47.5
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 1.5e-22 110.2 127 45.7
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.5e-22 110.2 127 46.5
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 2.6e-22 109.4 120 46.7
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 2.6e-22 109.4 100 54.0
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.6e-22 109.4 127 46.5
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 2.6e-22 109.4 100 54.0
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 3.3e-22 109.0 128 43.8
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 4.4e-22 108.6 99 53.5
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 5.7e-22 108.2 99 54.5
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 7.4e-22 107.8 128 43.8
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 9.7e-22 107.5 127 44.9
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.3e-21 107.1 99 53.5
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 1.7e-21 106.7 120 46.7
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 1.7e-21 106.7 127 42.5
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 2.2e-21 106.3 120 45.8
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 2.2e-21 106.3 99 52.5
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 2.8e-21 105.9 129 45.0
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 3.7e-21 105.5 128 43.0
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 8.2e-21 104.4 120 45.0
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 1.1e-20 104.0 99 51.5
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 1.4e-20 103.6 121 44.6
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.4e-20 103.6 99 50.5
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.4e-20 103.6 127 43.3
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 3.1e-20 102.4 100 54.0
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 5.3e-20 101.7 99 51.5
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 7.0e-20 101.3 127 44.1
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 9.1e-20 100.9 120 44.2
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.6e-19 99.4 127 43.3
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 5.9e-19 98.2 99 55.6
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 7.7e-19 97.8 127 41.7
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.7e-18 96.7 99 52.5
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 2.2e-18 96.3 131 44.3
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 2.2e-18 96.3 127 40.9
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 2.9e-18 95.9 99 50.5
Nitab4.5_0007774g0090 Nicotiana tabacum HOM05D003169 ORTHO05D036887 3.8e-18 95.5 141 45.4
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 5.0e-18 95.1 99 50.5
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 8.5e-18 94.4 97 49.5
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 1.2e-16 90.5 102 44.1
MBI18_g40795_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 4.4e-14 82.0 88 45.5
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 5.7e-14 81.6 100 46.0
Cpa.g.sc32.149 Carica papaya HOM05D003169 ORTHO05D003700 9.7e-14 80.9 46 76.1
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 1.7e-13 80.1 127 37.0
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 2.2e-13 79.7 99 39.4
Ca_30144_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 3.7e-13 79.0 103 42.7
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 3.7e-13 79.0 110 37.3
Ca_03187_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 6.3e-13 78.2 96 42.7
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 6.3e-13 78.2 100 44.0
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 4.1e-12 75.5 99 44.4
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 5.3e-12 75.1 120 36.7
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 2.2e-10 69.7 96 38.5
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 3.8e-10 68.9 96 36.5
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 1.1e-09 67.4 99 38.4
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 1.5e-09 67.0 120 35.0
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 1.9e-09 66.6 99 38.4
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 1.9e-09 66.6 100 37.0
TPR.G36388 Trifolium pratense HOM05D003169 ORTHO05D036887 2.5e-09 66.2 96 35.4
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 9.4e-09 64.3 96 37.5
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 1.2e-08 63.9 73 49.3
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 2.1e-08 63.2 139 31.7
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 6.1e-08 61.6 33 84.8
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 1.0e-07 60.8 139 30.9
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.0e-06 56.6 55 58.2
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 3.3e-06 55.8 136 30.1
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 9.7e-06 54.3 97 35.1


User provided reference genes

Program Settings