Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014432g0020 Nicotiana tabacum HOM05D003876 ORTHO05D004560 1.9e-43 178.7 88 100.0
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 1.5e-32 142.5 71 98.6
Solyc02g065500.4 Solanum lycopersicum HOM05D003876 ORTHO05D004560 1.3e-28 129.4 72 86.1
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 1.3e-28 129.4 72 86.1
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 3.3e-27 124.8 72 86.1
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 6.2e-26 120.6 82 70.7
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 6.2e-26 120.6 82 70.7
CSS0014906 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 3.1e-25 118.2 69 79.7
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 5.3e-25 117.5 72 80.6
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 4.9e-23 110.9 85 64.7
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 4.9e-23 110.9 85 64.7
CSS0042398 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 1.4e-22 109.4 69 75.4
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 1.9e-22 109.0 73 71.2
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 5.5e-22 107.5 72 70.8
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.2e-21 106.3 66 78.8
Lj4A311T24 Lonicera japonica HOM05D003876 ORTHO05D004560 7.9e-21 103.6 72 68.1
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 3.0e-20 101.7 78 60.3
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 5.1e-20 100.9 60 76.7
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 6.7e-20 100.5 84 63.1
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 1.5e-19 99.4 73 67.1
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 1.9e-19 99.0 64 68.8
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 1.9e-19 99.0 82 57.3
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 4.3e-19 97.8 66 71.2
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 7.4e-19 97.1 77 59.7
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 9.7e-19 96.7 72 63.9
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 1.3e-18 96.3 60 76.7
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 1.3e-18 96.3 76 63.2
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 1.6e-18 95.9 65 69.2
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 2.2e-18 95.5 73 64.4
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 2.8e-18 95.1 68 64.7
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 3.7e-18 94.7 65 69.2
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 3.7e-18 94.7 82 52.4
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 4.8e-18 94.4 71 63.4
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 6.3e-18 94.0 65 67.7
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 8.2e-18 93.6 71 62.0
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 1.1e-17 93.2 74 59.5
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 1.1e-17 93.2 60 71.7
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 1.8e-17 92.4 68 66.2
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 2.4e-17 92.0 82 53.7
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 2.4e-17 92.0 83 54.2
COL.COLO4_07980 Corchorus olitorius HOM05D003876 ORTHO05D004560 2.4e-17 92.0 83 53.0
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 5.3e-17 90.9 65 61.5
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 5.3e-17 90.9 67 62.7
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 6.9e-17 90.5 81 56.8
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 6.9e-17 90.5 82 53.7
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 9.0e-17 90.1 81 56.8
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 1.2e-16 89.7 67 65.7
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.2e-16 89.7 67 65.7
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.2e-16 89.7 67 65.7
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.2e-16 89.7 67 65.7
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 1.5e-16 89.4 67 61.2
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 2.0e-16 89.0 86 45.3
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 2.6e-16 88.6 66 63.6
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 7.7e-16 87.0 64 67.2
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.0e-15 86.7 65 69.2
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 1.3e-15 86.3 77 55.8
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 1.7e-15 85.9 69 56.5
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 2.2e-15 85.5 71 56.3
HPP92_009566 Vanilla planifolia HOM05D003876 ORTHO05D004560 2.2e-15 85.5 60 66.7
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 2.9e-15 85.1 70 58.6
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 2.9e-15 85.1 70 58.6
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 2.9e-15 85.1 67 59.7
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 3.8e-15 84.7 79 54.4
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 3.8e-15 84.7 68 66.2
Gohir.A05G328600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 5.0e-15 84.3 64 64.1
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 5.0e-15 84.3 72 56.9
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 5.0e-15 84.3 70 60.0
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 5.0e-15 84.3 82 52.4
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 6.5e-15 84.0 70 58.6
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 8.5e-15 83.6 67 56.7
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 8.5e-15 83.6 56 67.9
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 8.5e-15 83.6 60 63.3
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 1.1e-14 83.2 67 64.2
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.4e-14 82.8 74 60.8
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.4e-14 82.8 64 62.5
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 1.4e-14 82.8 64 62.5
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 1.9e-14 82.4 72 56.9
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 2.5e-14 82.0 66 65.2
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 2.5e-14 82.0 76 52.6
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 2.5e-14 82.0 67 62.7
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 4.2e-14 81.3 67 62.7
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 5.5e-14 80.9 66 63.6
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 5.5e-14 80.9 66 63.6
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 7.2e-14 80.5 72 54.2
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 9.4e-14 80.1 66 63.6
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 9.4e-14 80.1 60 66.7
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 1.2e-13 79.7 67 61.2
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 1.6e-13 79.3 60 61.7
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 4.6e-13 77.8 72 54.2
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 4.6e-13 77.8 66 65.2
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 7.9e-13 77.0 60 65.0
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 1.0e-12 76.6 60 65.0
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.8e-12 75.9 72 52.8
AL1048U10010 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 3.0e-12 75.1 60 63.3
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 3.0e-12 75.1 60 63.3
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 3.0e-12 75.1 60 63.3
SEGI_24019 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 5.1e-12 74.3 63 52.4
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.1e-11 73.2 60 63.3
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 1.1e-11 73.2 60 60.0
Lj4A310G25 Lonicera japonica HOM05D003876 ORTHO05D004560 5.7e-11 70.9 45 75.6
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 1.7e-10 69.3 50 64.0
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 2.2e-10 68.9 64 53.1
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 2.2e-10 68.9 65 53.8
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 4.8e-10 67.8 72 52.8
Psat3g160280 Pisum sativum HOM05D003876 ORTHO05D004560 8.2e-10 67.0 60 53.3
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 4.1e-09 64.7 60 48.3
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 2.6e-08 62.0 58 56.9
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 5.9e-08 60.8 61 52.5
Glyma.02G172300 Glycine max HOM05D003876 ORTHO05D004560 1.7e-07 59.3 56 51.8
CARHR234640 Cardamine hirsuta HOM05D003876 ORTHO05D004560 1.4e-06 56.2 44 61.4
CBR_g48672 Chara braunii HOM05D003876 ORTHO05D004560 7.2e-06 53.9 64 43.8


User provided reference genes

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