Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 4.3e-192 674.5 336 100.0
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 3.6e-183 644.8 334 96.1
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 4.5e-165 584.7 336 86.6
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.1e-163 580.1 333 87.4
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 5.5e-163 577.8 357 81.8
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.9e-160 569.3 368 79.6
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 2.9e-116 422.5 339 64.3
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 2.5e-107 392.9 331 60.4
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.2e-104 384.0 335 57.9
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 2.2e-103 379.8 336 58.3
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 1.1e-102 377.5 334 57.8
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.4e-102 377.1 336 58.3
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 3.1e-102 375.9 335 58.8
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 9.2e-102 374.4 335 59.7
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.7e-101 372.9 336 58.9
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 2.7e-101 372.9 335 60.3
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 7.8e-101 371.3 340 59.1
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.7e-100 370.2 334 56.0
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 4.3e-99 365.5 330 58.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.1e-98 361.7 329 58.7
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 4.0e-97 359.0 340 55.0
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.5e-96 357.1 352 57.4
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.5e-96 357.1 311 59.2
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.5e-96 357.1 339 56.3
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 2.0e-96 356.7 338 54.7
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 4.4e-96 355.5 338 57.4
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 6.4e-95 351.7 320 60.0
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.1e-94 350.9 335 56.7
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 1.2e-93 347.4 338 55.6
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.5e-93 345.9 337 57.0
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.5e-93 345.9 336 56.2
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 4.6e-93 345.5 360 53.6
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 7.8e-93 344.7 336 56.0
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 2.3e-92 343.2 338 54.4
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 5.0e-92 342.0 333 56.8
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 1.9e-91 340.1 339 54.9
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.5e-91 339.7 341 53.4
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 3.3e-91 339.3 336 54.5
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 5.6e-91 338.6 337 55.8
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 7.3e-91 338.2 336 53.0
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.8e-90 336.3 337 55.5
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.8e-89 333.6 335 55.5
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.3e-89 333.2 334 54.8
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.3e-89 333.2 343 53.1
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.1e-89 332.8 333 55.3
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 3.1e-89 332.8 334 56.0
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 5.2e-89 332.0 336 53.3
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.2e-89 332.0 333 54.4
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 2.0e-88 330.1 333 54.1
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 3.4e-88 329.3 334 55.4
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.5e-88 328.2 333 54.7
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 2.2e-87 326.6 336 52.4
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 6.4e-87 325.1 383 48.0
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 8.3e-87 324.7 334 51.8
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 8.3e-87 324.7 347 52.4
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 7.0e-86 321.6 335 52.5
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 1.2e-85 320.9 328 54.0
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.0e-84 317.8 355 51.0
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 1.1e-83 314.3 337 51.9
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.5e-83 313.9 329 52.0
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 5.6e-83 312.0 346 51.2
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 9.5e-83 311.2 278 61.2
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 2.1e-82 310.1 338 49.1
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 2.1e-82 310.1 335 52.5
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 3.6e-82 309.3 339 50.7
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 3.1e-81 306.2 346 50.6
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 8.3e-79 298.1 329 50.2
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 5.4e-78 295.4 311 50.8
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.1e-77 293.5 293 54.9
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 6.6e-76 288.5 335 47.8
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 8.6e-76 288.1 293 54.3
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.5e-75 287.3 343 48.4
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 7.3e-75 285.0 333 50.2
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 7.3e-75 285.0 356 46.9
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 1.2e-74 284.3 356 46.6
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 1.5e-72 277.3 336 47.3
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 2.2e-71 273.5 310 49.7
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 2.2e-71 273.5 344 45.6
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 3.8e-71 272.7 338 45.6
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 5.4e-70 268.9 203 65.5
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 5.4e-70 268.9 311 48.2
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 5.4e-70 268.9 311 48.6
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 2.1e-69 266.9 330 48.5
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 3.5e-69 266.2 330 45.8
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 7.8e-69 265.0 359 46.5
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 3.0e-68 263.1 263 52.5
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 3.3e-67 259.6 333 46.5
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 9.6e-67 258.1 334 46.7
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 1.3e-66 257.7 330 45.5
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 2.1e-66 256.9 312 47.4
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 2.8e-66 256.5 311 46.0
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 4.8e-66 255.8 311 46.0
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 4.8e-66 255.8 311 46.0
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 4.0e-65 252.7 207 58.9
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 5.3e-65 252.3 265 51.3
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 6.9e-65 251.9 314 46.8
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 7.6e-64 248.4 253 52.6
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.2e-63 246.9 300 48.3
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 3.8e-63 246.1 266 48.9
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 2.1e-61 240.4 336 42.3
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 7.8e-61 238.4 333 41.7
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 1.9e-59 233.8 205 59.0
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 3.6e-58 229.6 245 49.8
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 4.8e-58 229.2 242 51.7
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.4e-57 227.6 282 45.7
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.5e-51 206.8 210 51.9
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 1.4e-46 191.0 191 52.4
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.5e-46 190.3 203 48.8
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 3.2e-46 189.9 191 52.9
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 7.1e-46 188.7 198 54.5
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 3.0e-44 183.3 206 49.5
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 2.5e-43 180.3 202 47.0
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 5.7e-43 179.1 208 46.2
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.8e-42 176.8 202 46.5
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.4e-41 173.7 143 60.1
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 4.5e-40 169.5 136 64.0
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.5e-39 165.6 206 43.7
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.4e-38 164.5 193 45.1
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 1.9e-38 164.1 142 57.7
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 5.5e-38 162.5 208 45.2
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 5.3e-33 146.0 126 55.6
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 9.7e-27 125.2 181 40.9
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 5.5e-22 109.4 80 67.5
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 8.2e-18 95.5 213 32.9
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 9.1e-17 92.0 90 57.8
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 5.5e-06 56.2 41 68.3


User provided reference genes

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