Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011600g0040 Nicotiana tabacum HOM05D001972 ORTHO05D000002 8.2e-55 216.9 113 100.0
Nitab4.5_0000976g0060 Nicotiana tabacum HOM05D001972 ORTHO05D002555 2.9e-23 112.1 85 71.8
Peaxi162Scf00314g00643 Petunia axillaris HOM05D001972 ORTHO05D002555 2.7e-21 105.5 121 57.0
CAN.G843.9 Capsicum annuum HOM05D001972 ORTHO05D002555 9.8e-16 87.0 101 53.5
Oeu005559.1 Olea europaea HOM05D001972 ORTHO05D002555 8.6e-12 73.9 43 72.1
MSTRG.22844 Avicennia marina HOM05D001972 ORTHO05D002555 3.3e-11 72.0 138 39.9
SGA_v2.0_scaffold5G02839 Striga asiatica HOM05D001972 ORTHO05D002555 7.3e-11 70.9 64 54.7
Migut.I00624 Erythranthe guttata HOM05D001972 ORTHO05D002555 1.2e-10 70.1 106 41.5
Rhsim12G0017400 Rhododendron simsii HOM05D001972 ORTHO05D002555 2.1e-10 69.3 43 65.1
Aqoxy3G00249 Aquilegia oxysepala HOM05D001972 ORTHO05D002555 1.4e-09 66.6 96 47.9
TAR371G0570 Trochodendron aralioides HOM05D001972 ORTHO05D002555 2.3e-09 65.9 43 62.8
GSVIVG01001091001 Vitis vinifera HOM05D001972 ORTHO05D002555 4.0e-09 65.1 43 60.5
Lalb_Chr09g0327571 Lupinus albus HOM05D001972 ORTHO05D002555 5.2e-09 64.7 42 64.3
Sopen05g018290 Solanum pennellii HOM05D001972 ORTHO05D002555 5.2e-09 64.7 43 60.5
Psat7g017120 Pisum sativum HOM05D001972 ORTHO05D002555 6.8e-09 64.3 43 60.5
Dinv23229 Davidia involucrata HOM05D001972 ORTHO05D002555 8.9e-09 63.9 79 46.8
Eucgr.B03561 Eucalyptus grandis HOM05D001972 ORTHO05D002555 1.2e-08 63.5 43 58.1
Medtr5g098680 Medicago truncatula HOM05D001972 ORTHO05D002555 1.2e-08 63.5 43 60.5
PSO017G1676 Papaver somniferum HOM05D001972 ORTHO05D002555 1.2e-08 63.5 43 60.5
Sopen05g018150 Solanum pennellii HOM05D001972 ORTHO05D000002 1.2e-08 63.5 43 58.1
Lalb_Chr04g0247071 Lupinus albus HOM05D001972 ORTHO05D002555 1.5e-08 63.2 43 60.5
ECA246G1936 Erigeron canadensis HOM05D001972 ORTHO05D002555 2.0e-08 62.8 105 39.0
PSO478G0720 Papaver somniferum HOM05D001972 ORTHO05D002555 2.6e-08 62.4 73 49.3
RcHm_v2.0_Chr6g0248801 Rosa chinensis HOM05D001972 ORTHO05D002555 2.6e-08 62.4 64 48.4
PSO210G2068 Papaver somniferum HOM05D001972 ORTHO05D002555 4.4e-08 61.6 122 32.8
Solyc05g023680.4 Solanum lycopersicum HOM05D001972 ORTHO05D002555 4.4e-08 61.6 61 50.8
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 5.8e-08 61.2 43 55.8
Dinv13717 Davidia involucrata HOM05D001972 ORTHO05D002555 7.5e-08 60.8 125 37.6
TAR629G3149 Trochodendron aralioides HOM05D001972 ORTHO05D002555 7.5e-08 60.8 86 40.7
Thecc.02G192000 Theobroma cacao HOM05D001972 ORTHO05D002555 9.9e-08 60.5 43 60.5
Aqoxy7G02347 Aquilegia oxysepala HOM05D001972 ORTHO05D002555 1.3e-07 60.1 43 60.5
CiPaw.06G109400 Carya illinoinensis HOM05D001972 ORTHO05D002555 1.3e-07 60.1 43 53.5
CDE09G0970 Ceratophyllum demersum HOM05D001972 ORTHO05D002555 1.3e-07 60.1 41 63.4
Ciclev10010603m.g Citrus clementina HOM05D001972 ORTHO05D002555 1.3e-07 60.1 43 60.5
CDE05G3596 Ceratophyllum demersum HOM05D001972 ORTHO05D002555 1.7e-07 59.7 126 33.3
HanXRQChr17g0540401 Helianthus annuus HOM05D001972 ORTHO05D002555 1.7e-07 59.7 88 42.0
Hund10034 Selenicereus undatus HOM05D001972 ORTHO05D002555 1.7e-07 59.7 41 68.3
PGSC0003DMG400033921 Solanum tuberosum HOM05D001972 ORTHO05D002555 1.7e-07 59.7 61 49.2
LjContig00081g0001043 Lotus japonicus HOM05D001972 ORTHO05D002555 2.9e-07 58.9 86 39.5
FvH4_5g09600 Fragaria vesca HOM05D001972 ORTHO05D002555 3.7e-07 58.5 43 58.1
Glyma.02G309100 Glycine max HOM05D001972 ORTHO05D002555 3.7e-07 58.5 79 43.0
Nn4g22129 Nelumbo nucifera HOM05D001972 ORTHO05D002555 3.7e-07 58.5 100 41.0
PSO210G1865 Papaver somniferum HOM05D001972 ORTHO05D002555 3.7e-07 58.5 122 32.8
PSO210G5274 Papaver somniferum HOM05D001972 ORTHO05D002555 3.7e-07 58.5 122 36.9
Cc00_g03860 Coffea canephora HOM05D001972 ORTHO05D002555 4.9e-07 58.2 102 39.2
HanXRQChr17g0540411 Helianthus annuus HOM05D001972 ORTHO05D002555 4.9e-07 58.2 103 39.8
MBI10_g32323_MAGBIO Magnolia biondii HOM05D001972 ORTHO05D002555 6.4e-07 57.8 101 40.6
PSO210G3990 Papaver somniferum HOM05D001972 ORTHO05D002555 6.4e-07 57.8 122 36.1
QL03p049129 Quercus lobata HOM05D001972 ORTHO05D002555 6.4e-07 57.8 102 41.2
TWI81G0569 Tripterygium wilfordii HOM05D001972 ORTHO05D002555 6.4e-07 57.8 73 43.8
TAR622G1212 Trochodendron aralioides HOM05D001972 ORTHO05D002555 6.4e-07 57.8 85 40.0
arahy.Tifrunner.gnm1.ann1.56L42H Arachis hypogaea HOM05D001972 ORTHO05D002555 8.3e-07 57.4 98 36.7
FvH4_4g22630 Fragaria vesca HOM05D001972 ORTHO05D002555 8.3e-07 57.4 41 63.4
unitig_21.g20336 Utricularia gibba HOM05D001972 ORTHO05D002555 8.3e-07 57.4 117 35.9
Migut.K01054 Erythranthe guttata HOM05D001972 ORTHO05D002555 1.1e-06 57.0 103 37.9
HanXRQChr06g0175121 Helianthus annuus HOM05D001972 ORTHO05D002555 1.1e-06 57.0 113 36.3
MBI07_g35978_MAGBIO Magnolia biondii HOM05D001972 ORTHO05D002555 1.1e-06 57.0 60 50.0
Nn3g16270 Nelumbo nucifera HOM05D001972 ORTHO05D002555 1.1e-06 57.0 102 36.3
Cc07_g20990 Coffea canephora HOM05D001972 ORTHO05D002555 1.4e-06 56.6 89 40.4
Haze_07095 Corylus avellana HOM05D001972 ORTHO05D002555 1.4e-06 56.6 69 44.9
Glyma.14G003700 Glycine max HOM05D001972 ORTHO05D002555 1.4e-06 56.6 79 41.8
QL10p000430 Quercus lobata HOM05D001972 ORTHO05D002555 1.4e-06 56.6 97 38.1
Ah.02g114580 Amaranthus hybridus HOM05D001972 ORTHO05D002555 1.9e-06 56.2 41 63.4
FAN12G3093 Fragaria x ananassa HOM05D001972 ORTHO05D002555 1.9e-06 56.2 41 61.0
Lsat_1_v5_gn_3_32700 Lactuca sativa HOM05D001972 ORTHO05D002555 1.9e-06 56.2 117 36.8
Aqoxy1G02842 Aquilegia oxysepala HOM05D001972 ORTHO05D002555 2.4e-06 55.8 43 55.8
arahy.Tifrunner.gnm1.ann1.PKEE8T Arachis hypogaea HOM05D001972 ORTHO05D002555 2.4e-06 55.8 98 35.7
Prupe.5G140900 Prunus persica HOM05D001972 ORTHO05D002555 2.4e-06 55.8 125 36.8
vmacro08746 Vaccinium macrocarpon HOM05D001972 ORTHO05D002555 2.4e-06 55.8 91 37.4
Oeu027105.1 Olea europaea HOM05D001972 ORTHO05D002555 3.2e-06 55.5 107 40.2
Actinidia22116 Actinidia chinensis HOM05D001972 ORTHO05D002555 4.1e-06 55.1 107 40.2
CiPaw.05G101100 Carya illinoinensis HOM05D001972 ORTHO05D002555 4.1e-06 55.1 71 42.3
ECA246G1510 Erigeron canadensis HOM05D001972 ORTHO05D002555 4.1e-06 55.1 82 39.0
Hma1.2p1_0787F.1_g217960 Hydrangea macrophylla HOM05D001972 ORTHO05D002555 4.1e-06 55.1 78 43.6
Lj5A86T69 Lonicera japonica HOM05D001972 ORTHO05D002555 4.1e-06 55.1 85 41.2
vmacro19188 Vaccinium macrocarpon HOM05D001972 ORTHO05D002555 4.1e-06 55.1 77 45.5
CsaV3_4G030410 Cucumis sativus L. HOM05D001972 ORTHO05D002555 5.4e-06 54.7 41 58.5
FAN07G0581 Fragaria x ananassa HOM05D001972 ORTHO05D002555 5.4e-06 54.7 40 60.0
Peaxi162Scf00128g01758 Petunia axillaris HOM05D001972 ORTHO05D002555 5.4e-06 54.7 94 40.4
CSS0008642 Camellia sinensis var. sinensis HOM05D001972 ORTHO05D002555 7.1e-06 54.3 79 44.3
CSS0028342 Camellia sinensis var. sinensis HOM05D001972 ORTHO05D002555 7.1e-06 54.3 79 44.3
Cfa009451 Carpinus fangiana HOM05D001972 ORTHO05D002555 7.1e-06 54.3 71 40.8
Lsat_1_v5_gn_3_32341 Lactuca sativa HOM05D001972 ORTHO05D002555 7.1e-06 54.3 91 41.8
Peaxi162Scf00428g00417 Petunia axillaris HOM05D001972 ORTHO05D002555 9.2e-06 53.9 88 42.0
Psat2g002120 Pisum sativum HOM05D001972 ORTHO05D002555 9.2e-06 53.9 97 35.1
Sed0010227 Sechium edule HOM05D001972 ORTHO05D002555 9.2e-06 53.9 41 56.1
vmacro01020 Vaccinium macrocarpon HOM05D001972 ORTHO05D002555 9.2e-06 53.9 122 34.4


User provided reference genes

Program Settings