Gene: Cc00_g03860
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g03860
- Transcript Identifier Cc00_g03860.1
- Gene Type Coding gene
- Location chr0 : 30109110-30115098 : negative
Gene Family Information
- ID HOM05D001972
- #Genes/#Species 335/98
- Phylogenetic origin
- ID ORTHO05D002555
- #Genes/#Species 279/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB I1JJU5
- UniProtKB Q9FKA7
- UniProtKB D7KYM7
- UniProtKB B9SU90
- UniProtKB Q9FVS2
- UniProtKB Q8VYZ0
- id GSCOCG00004297001
Descriptions
- Description Zinc finger protein, putative
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0032776 | ISO | PLAZA Integrative Orthology | DNA methylation on cytosine | AT1G57820 |
GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT4G08590 |
GO:0090309 | ISO | PLAZA Integrative Orthology | positive regulation of DNA methylation-dependent heterochromatin assembly | AT1G57820 |
GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT5G39550 |
GO:0010424 | ISO | PLAZA Integrative Orthology | DNA methylation on cytosine within a CG sequence | AT1G57820 |
GO:0031508 | ISO | PLAZA Integrative Orthology | pericentric heterochromatin assembly | AT1G57820 |
GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT1G57820 |
GO:0006325 | ISO | PLAZA Integrative Orthology | chromatin organization | AT1G57820 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT1G57820 |
GO:0010429 | ISO | PLAZA Integrative Orthology | methyl-CpNpN binding | AT1G57820 |
GO:0010385 | ISO | PLAZA Integrative Orthology | double-stranded methylated DNA binding | AT1G57820 |
GO:0010428 | ISO | PLAZA Integrative Orthology | methyl-CpNpG binding | AT1G57820 |
GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT4G08590 |
GO:0008327 | ISO | PLAZA Integrative Orthology | methyl-CpG binding | AT1G57820 |
GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT1G57820 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010369 | ISO | PLAZA Integrative Orthology | chromocenter | AT1G57820 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G08590 |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G57820 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
12.5.2.3 | Chromatin organisation.DNA methylation.RNA-independent DNA methylation.regulatory cofactor (ORTH/VIM) |